Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_22116 Corylus avellana HOM05D000097 ORTHO05D000041 2.8e-61 238.4 121 100.0
Haze_03428 Corylus avellana HOM05D001924 ORTHO05D001884 2.3e-23 112.5 94 67.0
Haze_25291 Corylus avellana HOM05D000097 ORTHO05D000041 9.8e-22 107.1 84 70.2
Haze_05372 Corylus avellana HOM05D000097 ORTHO05D000041 4.0e-15 85.1 111 43.2
Cfa001106 Carpinus fangiana HOM05D000097 ORTHO05D000041 5.4e-12 74.7 110 40.9
CSS0044034 Camellia sinensis var. sinensis HOM05D000097 ORTHO05D000041 2.7e-11 72.4 116 39.7
Hma1.2p1_1005F.1_g246880 Hydrangea macrophylla HOM05D000097 ORTHO05D000041 2.3e-10 69.3 110 41.8
QL11p014322 Quercus lobata HOM05D000097 ORTHO05D000041 2.3e-10 69.3 107 41.1
CsaV3_5G005920 Cucumis sativus L. HOM05D000097 ORTHO05D000041 3.0e-10 68.9 119 36.1
Dinv15490 Davidia involucrata HOM05D000097 ORTHO05D000041 1.5e-09 66.6 108 43.5
GSVIVG01012107001 Vitis vinifera HOM05D000097 ORTHO05D001641 1.5e-09 66.6 116 39.7
CSS0045553 Camellia sinensis var. sinensis HOM05D000097 ORTHO05D000041 4.3e-09 65.1 104 38.5
CsaV3_5G005950 Cucumis sativus L. HOM05D000097 ORTHO05D000041 4.3e-09 65.1 119 36.1
Hma1.2p1_0552F.1_g177730 Hydrangea macrophylla HOM05D000097 ORTHO05D000041 4.3e-09 65.1 104 40.4
QL11p015452 Quercus lobata HOM05D000097 ORTHO05D000041 7.3e-09 64.3 108 38.0
QL11p015610 Quercus lobata HOM05D000097 ORTHO05D000041 7.3e-09 64.3 108 38.0
Dinv03567 Davidia involucrata HOM05D000097 ORTHO05D000041 9.5e-09 63.9 116 39.7
Dinv05037 Davidia involucrata HOM05D000097 ORTHO05D000041 9.5e-09 63.9 116 39.7
QL11p015433 Quercus lobata HOM05D000097 ORTHO05D000041 9.5e-09 63.9 108 38.9
QL11p015595 Quercus lobata HOM05D000097 ORTHO05D000041 9.5e-09 63.9 108 38.9
Manes.16G055600 Manihot esculenta HOM05D000097 ORTHO05D000041 1.6e-08 63.2 115 39.1
Cc09_g05960 Coffea canephora HOM05D000097 ORTHO05D000041 2.1e-08 62.8 108 40.7
QL11p014837 Quercus lobata HOM05D000097 ORTHO05D000041 2.1e-08 62.8 125 36.8
Eucgr.E04258 Eucalyptus grandis HOM05D000097 ORTHO05D000041 2.8e-08 62.4 117 35.9
Eucgr.E04256 Eucalyptus grandis HOM05D000097 ORTHO05D000041 3.6e-08 62.0 119 38.7
Hma1.2p1_0498F.1_g166590 Hydrangea macrophylla HOM05D000097 ORTHO05D000041 3.6e-08 62.0 104 38.5
Cpa.g.sc30.153 Carica papaya HOM05D000097 ORTHO05D000041 4.7e-08 61.6 115 37.4
Actinidia22409 Actinidia chinensis HOM05D000097 ORTHO05D000041 6.2e-08 61.2 116 35.3
Cpa.g.sc30.149 Carica papaya HOM05D000097 ORTHO05D000041 6.2e-08 61.2 108 38.0
Dinv01231 Davidia involucrata HOM05D000097 ORTHO05D000041 6.2e-08 61.2 104 37.5
MELO3C005362.2 Cucumis melo HOM05D000097 ORTHO05D000041 1.1e-07 60.5 119 33.6
Duzib160G0926 Durio zibethinus HOM05D000097 ORTHO05D000041 1.1e-07 60.5 118 36.4
QL11p014912 Quercus lobata HOM05D000097 ORTHO05D000041 1.1e-07 60.5 109 34.9
Sed0015043 Sechium edule HOM05D000097 ORTHO05D000041 1.1e-07 60.5 119 35.3
Dinv03651 Davidia involucrata HOM05D000097 ORTHO05D000041 1.4e-07 60.1 116 37.1
RcHm_v2.0_Chr5g0059341 Rosa chinensis HOM05D000097 ORTHO05D000041 2.3e-07 59.3 119 37.0
Solyc02g068670.3 Solanum lycopersicum HOM05D000097 ORTHO05D000041 2.3e-07 59.3 116 38.8
PGSC0003DMG400010440 Solanum tuberosum HOM05D000097 ORTHO05D000041 2.3e-07 59.3 116 38.8
Thecc.06G138300 Theobroma cacao HOM05D000097 ORTHO05D000041 2.3e-07 59.3 118 35.6
Atru.chr10.829 Acer truncatum HOM05D000097 ORTHO05D000041 3.1e-07 58.9 107 39.3
Potri.015G125000 Populus trichocarpa HOM05D000097 ORTHO05D000041 3.1e-07 58.9 115 35.7
Rhsim13G0155000 Rhododendron simsii HOM05D000097 ORTHO05D000041 3.1e-07 58.9 116 37.1
ClCG03G004310 Citrullus lanatus HOM05D000097 ORTHO05D000041 5.2e-07 58.2 113 37.2
QL11p016052 Quercus lobata HOM05D000097 ORTHO05D000041 5.2e-07 58.2 118 32.2
Atru.chr10.64 Acer truncatum HOM05D000097 ORTHO05D000041 8.9e-07 57.4 107 38.3
Dinv15491 Davidia involucrata HOM05D000097 ORTHO05D000041 8.9e-07 57.4 110 37.3
TWI15G0584 Tripterygium wilfordii HOM05D000097 ORTHO05D000041 8.9e-07 57.4 108 38.9
Haze_05305 Corylus avellana HOM05D000097 ORTHO05D000041 1.2e-06 57.0 110 37.3
Atru.chr10.87 Acer truncatum HOM05D000097 ORTHO05D000041 1.5e-06 56.6 107 37.4
Ciclev10014428m.g Citrus clementina HOM05D000097 ORTHO05D000041 1.5e-06 56.6 108 38.0
COL.COLO4_30951 Corchorus olitorius HOM05D000097 ORTHO05D000041 1.5e-06 56.6 116 33.6
QL11p015794 Quercus lobata HOM05D000097 ORTHO05D000041 1.5e-06 56.6 108 34.3
Ciclev10003360m.g Citrus clementina HOM05D000097 ORTHO05D000041 2.0e-06 56.2 98 37.8
Actinidia22412 Actinidia chinensis HOM05D000097 ORTHO05D000041 2.6e-06 55.8 117 34.2
AT3G54070 Arabidopsis thaliana HOM05D000097 ORTHO05D000041 2.6e-06 55.8 115 29.6
Hma1.2p1_0498F.1_g166570 Hydrangea macrophylla HOM05D000097 ORTHO05D000041 2.6e-06 55.8 90 38.9
Cfa000845 Carpinus fangiana HOM05D000097 ORTHO05D000041 3.4e-06 55.5 112 36.6
Peaxi162Scf00149g00022 Petunia axillaris HOM05D000097 ORTHO05D000041 3.4e-06 55.5 114 36.8
Thecc.01G126000 Theobroma cacao HOM05D000097 ORTHO05D000041 3.4e-06 55.5 90 35.6
TAR627G0118 Trochodendron aralioides HOM05D000097 ORTHO05D000041 3.4e-06 55.5 108 38.0
Ciclev10018102m.g Citrus clementina HOM05D000097 ORTHO05D000041 4.4e-06 55.1 86 36.0
Haze_05348 Corylus avellana HOM05D000097 ORTHO05D000041 4.4e-06 55.1 115 31.3
DCAR_011885 Daucus carota HOM05D000097 ORTHO05D000041 4.4e-06 55.1 101 35.6
HanXRQChr15g0487441 Helianthus annuus HOM05D000097 ORTHO05D000041 4.4e-06 55.1 86 36.0
Lsat_1_v5_gn_1_45260 Lactuca sativa HOM05D000097 ORTHO05D000041 4.4e-06 55.1 87 36.8
TAR627G0380 Trochodendron aralioides HOM05D000097 ORTHO05D000041 4.4e-06 55.1 108 38.9
Cfa001123 Carpinus fangiana HOM05D000097 ORTHO05D000041 5.8e-06 54.7 108 34.3
Dinv09055 Davidia involucrata HOM05D000097 ORTHO05D000041 5.8e-06 54.7 108 36.1
Lsat_1_v5_gn_1_45280 Lactuca sativa HOM05D000097 ORTHO05D000041 5.8e-06 54.7 87 40.2
Lsat_1_v5_gn_1_45601 Lactuca sativa HOM05D000097 ORTHO05D000041 5.8e-06 54.7 87 35.6
Lsat_1_v5_gn_8_106541 Lactuca sativa HOM05D000097 ORTHO05D000041 5.8e-06 54.7 87 35.6
Lj7A686G70 Lonicera japonica HOM05D000097 ORTHO05D000041 5.8e-06 54.7 121 36.4
MELO3C002412.2 Cucumis melo HOM05D000097 ORTHO05D000041 7.6e-06 54.3 115 33.0
Lsat_1_v5_gn_8_119100 Lactuca sativa HOM05D000097 ORTHO05D000041 7.6e-06 54.3 87 37.9
Atru.chr4.2609 Acer truncatum HOM05D000097 ORTHO05D000041 9.9e-06 53.9 89 33.7
Ciclev10000862m.g Citrus clementina HOM05D000097 ORTHO05D000041 9.9e-06 53.9 87 39.1
CsaV3_1G010270 Cucumis sativus L. HOM05D000097 ORTHO05D000041 9.9e-06 53.9 113 35.4
Lsat_1_v5_gn_8_106261 Lactuca sativa HOM05D000097 ORTHO05D000041 9.9e-06 53.9 89 33.7
Sabra15G0139400 Salix brachista HOM05D000097 ORTHO05D000041 9.9e-06 53.9 115 33.0


User provided reference genes

Program Settings