Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_22095 Corylus avellana HOM05D007223 ORTHO05D008932 2.4e-96 355.5 180 100.0
Cfa013503 Carpinus fangiana HOM05D007223 ORTHO05D008932 3.8e-62 241.9 135 90.4
Gohir.A08G084300 Gossypium hirsutum HOM05D007223 ORTHO05D008932 3.2e-45 185.7 148 69.6
Thecc.09G177700 Theobroma cacao HOM05D007223 ORTHO05D008932 1.6e-44 183.3 152 65.8
Gorai.004G099600 Gossypium raimondii HOM05D007223 ORTHO05D008932 2.7e-44 182.6 148 68.2
Duzib170G0975 Durio zibethinus HOM05D007223 ORTHO05D008932 1.0e-43 180.6 148 65.5
Gohir.D08G093900 Gossypium hirsutum HOM05D007223 ORTHO05D008932 1.0e-43 180.6 148 67.6
CSS0040203 Camellia sinensis var. sinensis HOM05D007223 ORTHO05D008932 1.5e-42 176.8 159 61.0
CiPaw.08G036200 Carya illinoinensis HOM05D007223 ORTHO05D008932 7.5e-42 174.5 135 69.6
QL02p097776 Quercus lobata HOM05D007223 ORTHO05D008932 1.3e-41 173.7 145 69.7
Duzib168G2276 Durio zibethinus HOM05D007223 ORTHO05D008932 3.7e-41 172.2 151 66.2
MD13G1253600 Malus domestica HOM05D007223 ORTHO05D008932 1.1e-40 170.6 141 66.0
Sabra06G0129600 Salix brachista HOM05D007223 ORTHO05D008932 2.4e-40 169.5 143 65.0
Prupe.1G085900 Prunus persica HOM05D007223 ORTHO05D008932 1.6e-39 166.8 138 65.2
RcHm_v2.0_Chr4g0402441 Rosa chinensis HOM05D007223 ORTHO05D008932 2.7e-39 166.0 142 64.1
Ciclev10010470m.g Citrus clementina HOM05D007223 ORTHO05D008932 2.2e-38 162.9 102 76.5
Dinv41246 Davidia involucrata HOM05D007223 ORTHO05D008932 2.9e-38 162.5 155 61.9
FAN17G0481 Fragaria x ananassa HOM05D007223 ORTHO05D008932 2.9e-38 162.5 142 63.4
Potri.006G166900 Populus trichocarpa HOM05D007223 ORTHO05D008932 6.5e-38 161.4 151 59.6
FAN07G1685 Fragaria x ananassa HOM05D007223 ORTHO05D008932 8.5e-38 161.0 142 64.1
COL.COLO4_37700 Corchorus olitorius HOM05D007223 ORTHO05D008932 1.5e-37 160.2 172 57.0
Lalb_Chr07g0180471 Lupinus albus HOM05D007223 ORTHO05D008932 1.5e-37 160.2 141 61.7
FAN22G1200 Fragaria x ananassa HOM05D007223 ORTHO05D008932 2.5e-37 159.5 142 62.7
Cpa.g.sc233.11 Carica papaya HOM05D007223 ORTHO05D008932 3.2e-37 159.1 152 58.6
FAN12G3200 Fragaria x ananassa HOM05D007223 ORTHO05D008932 4.2e-37 158.7 143 62.2
FvH4_4g08200 Fragaria vesca HOM05D007223 ORTHO05D008932 7.2e-37 157.9 143 62.2
Atru.chr7.623 Acer truncatum HOM05D007223 ORTHO05D008932 1.6e-36 156.8 97 82.5
Phvul.003G145600 Phaseolus vulgaris HOM05D007223 ORTHO05D008932 2.1e-36 156.4 147 60.5
Manes.14G153900 Manihot esculenta HOM05D007223 ORTHO05D008932 6.1e-36 154.8 143 60.8
THA.LOC104813522 Tarenaya hassleriana HOM05D007223 ORTHO05D008932 1.4e-35 153.7 134 61.2
arahy.Tifrunner.gnm1.ann1.LBMC6N Arachis hypogaea HOM05D007223 ORTHO05D008932 1.8e-35 153.3 156 58.3
Thhalv10015874m.g Eutrema salsugineum HOM05D007223 ORTHO05D008932 1.8e-35 153.3 154 58.4
arahy.Tifrunner.gnm1.ann1.1E3WXN Arachis hypogaea HOM05D007223 ORTHO05D008932 4.0e-35 152.1 161 56.5
TAR383G1061 Trochodendron aralioides HOM05D007223 ORTHO05D008932 4.0e-35 152.1 155 57.4
Oeu004200.1 Olea europaea HOM05D007223 ORTHO05D008932 5.2e-35 151.8 143 59.4
Dinv42721 Davidia involucrata HOM05D007223 ORTHO05D008932 6.8e-35 151.4 153 58.2
Dinv43380 Davidia involucrata HOM05D007223 ORTHO05D008932 6.8e-35 151.4 153 58.2
VMungo1215G0104 Vigna mungo HOM05D007223 ORTHO05D008932 6.8e-35 151.4 145 60.0
Sp6g19140 Schrenkiella parvula HOM05D007223 ORTHO05D008932 8.8e-35 151.0 153 57.5
Actinidia04146 Actinidia chinensis HOM05D007223 ORTHO05D008932 1.5e-34 150.2 135 60.0
Oeu042168.1 Olea europaea HOM05D007223 ORTHO05D008932 2.0e-34 149.8 148 60.1
BcaB08g36098 Brassica carinata HOM05D007223 ORTHO05D008932 1.7e-33 146.7 129 62.8
Ca_21226_v3 Cicer arietinum L. HOM05D007223 ORTHO05D008932 1.7e-33 146.7 137 59.1
Cc06_g13230 Coffea canephora HOM05D007223 ORTHO05D008932 2.2e-33 146.4 162 53.7
A10p14870 Brassica napus HOM05D007223 ORTHO05D008932 2.8e-33 146.0 136 58.8
Potri.018G092300 Populus trichocarpa HOM05D007223 ORTHO05D008932 2.8e-33 146.0 148 60.8
GSVIVG01029215001 Vitis vinifera HOM05D007223 ORTHO05D008932 3.7e-33 145.6 141 56.0
BraA10t43566Z Brassica rapa HOM05D007223 ORTHO05D008932 6.3e-33 144.8 153 54.9
C09p49290 Brassica napus HOM05D007223 ORTHO05D008932 8.3e-33 144.4 111 67.6
Nn8g40486 Nelumbo nucifera HOM05D007223 ORTHO05D008932 8.3e-33 144.4 150 58.7
Carub.0008s1794 Capsella rubella HOM05D007223 ORTHO05D008932 1.4e-32 143.7 152 54.6
Eucgr.C02329 Eucalyptus grandis HOM05D007223 ORTHO05D008932 1.4e-32 143.7 155 54.2
THA.LOC104817792 Tarenaya hassleriana HOM05D007223 ORTHO05D008932 1.8e-32 143.3 109 69.7
BcaC04g19969 Brassica carinata HOM05D007223 ORTHO05D008932 2.4e-32 142.9 109 68.8
TPR.G5371 Trifolium pratense HOM05D007223 ORTHO05D008932 2.4e-32 142.9 137 59.9
TAR625G0650 Trochodendron aralioides HOM05D007223 ORTHO05D008932 3.1e-32 142.5 157 54.1
CARHR271220 Cardamine hirsuta HOM05D007223 ORTHO05D008932 5.4e-32 141.7 150 54.0
AT5G57420 Arabidopsis thaliana HOM05D007223 ORTHO05D008932 7.0e-32 141.4 151 55.0
BolC9t57780H Brassica oleracea HOM05D007223 ORTHO05D008932 9.1e-32 141.0 152 53.9
BraA02t05920Z Brassica rapa HOM05D007223 ORTHO05D008932 9.1e-32 141.0 152 53.9
A02p08480 Brassica napus HOM05D007223 ORTHO05D008932 1.2e-31 140.6 152 53.9
C02p14240 Brassica napus HOM05D007223 ORTHO05D008932 2.0e-31 139.8 152 53.3
Peaxi162Scf00231g00621 Petunia axillaris HOM05D007223 ORTHO05D008932 2.0e-31 139.8 149 53.0
MSTRG.6217 Avicennia marina HOM05D007223 ORTHO05D008932 2.7e-31 139.4 164 52.4
BolC2t07548H Brassica oleracea HOM05D007223 ORTHO05D008932 2.7e-31 139.4 152 53.3
Lj4g0003272 Lotus japonicus HOM05D007223 ORTHO05D008932 2.7e-31 139.4 149 56.4
AL8G33400 Arabidopsis lyrata HOM05D007223 ORTHO05D008932 3.5e-31 139.0 152 55.3
Rhsim01G0004500 Rhododendron simsii HOM05D007223 ORTHO05D008932 3.5e-31 139.0 138 59.4
Lalb_Chr13g0300221 Lupinus albus HOM05D007223 ORTHO05D008932 4.5e-31 138.7 142 57.7
BcaC03g14153 Brassica carinata HOM05D007223 ORTHO05D008932 5.9e-31 138.3 152 53.3
Medtr4g128070 Medicago truncatula HOM05D007223 ORTHO05D008932 5.9e-31 138.3 145 55.9
BcaB05g22346 Brassica carinata HOM05D007223 ORTHO05D008932 7.7e-31 137.9 149 54.4
PGR102G0813 Punica granatum HOM05D007223 ORTHO05D008932 1.3e-30 137.1 204 46.1
vmacro13125 Vaccinium macrocarpon HOM05D007223 ORTHO05D008932 1.3e-30 137.1 138 60.1
Aa31LG3G13310 Aethionema arabicum HOM05D007223 ORTHO05D008932 1.7e-30 136.7 143 55.2
MELO3C004026.2 Cucumis melo HOM05D007223 ORTHO05D008932 2.9e-30 136.0 97 67.0
SalBow6G4081 Salvia bowleyana HOM05D007223 ORTHO05D008932 2.9e-30 136.0 134 56.0
MBI14_g17369_MAGBIO Magnolia biondii HOM05D003252 ORTHO05D003640 8.6e-30 134.4 150 52.7
MSTRG.19707 Avicennia marina HOM05D007223 ORTHO05D008932 1.9e-29 133.3 119 63.0
Lj5C590T0 Lonicera japonica HOM05D007223 ORTHO05D008932 9.5e-29 131.0 141 55.3
Psat4g012360 Pisum sativum HOM05D007223 ORTHO05D008932 1.2e-28 130.6 144 52.8
Lj5C7T1 Lonicera japonica HOM05D007223 ORTHO05D008932 4.7e-28 128.6 141 54.6
Sed0023808 Sechium edule HOM05D007223 ORTHO05D008932 6.1e-28 128.3 98 64.3
CANSAT11G1503 Cannabis sativa HOM05D007223 ORTHO05D008932 4.0e-27 125.6 88 69.3
ClCG11G012160 Citrullus lanatus HOM05D007223 ORTHO05D008932 4.0e-27 125.6 85 71.8
CsaV3_2G008380 Cucumis sativus L. HOM05D007223 ORTHO05D008932 4.0e-27 125.6 92 67.4
Migut.J01482 Erythranthe guttata HOM05D007223 ORTHO05D008932 5.2e-27 125.2 151 49.7
Hma1.2p1_1025F.1_g249310 Hydrangea macrophylla HOM05D007223 ORTHO05D008932 1.5e-26 123.6 177 47.5
HanXRQChr10g0308641 Helianthus annuus HOM05D007223 ORTHO05D008932 2.6e-26 122.9 102 58.8
PSO782G5105 Papaver somniferum HOM05D007223 ORTHO05D008932 7.5e-26 121.3 104 59.6
MBI16_g39833_MAGBIO Magnolia biondii HOM05D007223 ORTHO05D008932 1.3e-25 120.6 92 67.4
Lsat_1_v5_gn_5_85421 Lactuca sativa HOM05D007223 ORTHO05D008932 3.7e-25 119.0 91 61.5
Os04g0653300 Oryza sativa ssp. japonica HOM05D007223 ORTHO05D008932 3.7e-25 119.0 99 61.6
PGSC0003DMG400043142 Solanum tuberosum HOM05D007223 ORTHO05D008932 1.1e-24 117.5 81 70.4
SGA_v2.0_scaffold69G23253 Striga asiatica HOM05D007223 ORTHO05D008932 3.1e-24 115.9 96 60.4
EL10Ac8g18282 Beta vulgaris HOM05D007223 ORTHO05D008932 4.1e-24 115.5 164 46.3
DCAR_014699 Daucus carota HOM05D007223 ORTHO05D008932 7.0e-24 114.8 87 69.0
Solyc07g019450.3 Solanum lycopersicum HOM05D007223 ORTHO05D008932 7.0e-24 114.8 83 67.5
ATR0580G272 Amborella trichopoda HOM05D007223 ORTHO05D008932 3.5e-23 112.5 88 64.8
ECA234G1236 Erigeron canadensis HOM05D007223 ORTHO05D008932 3.8e-22 109.0 85 62.4
AUR62033216 Chenopodium quinoa HOM05D007223 ORTHO05D008932 1.1e-21 107.5 160 44.4
SEGI_39293 Sequoiadendron giganteum HOM05D007223 ORTHO05D008932 8.0e-20 101.3 115 50.4
HPP92_017414 Vanilla planifolia HOM05D007223 ORTHO05D008932 5.2e-19 98.6 135 44.4
Zm00001eb432400 Zea mays HOM05D007223 ORTHO05D008932 7.5e-18 94.7 133 39.8
Nitab4.5_0001972g0010 Nicotiana tabacum HOM05D007223 ORTHO05D008932 1.9e-13 80.1 61 63.9
Glyma.20G083900 Glycine max HOM05D007223 ORTHO05D008932 1.2e-12 77.4 111 47.7
SEGI_19995 Sequoiadendron giganteum HOM05D007223 ORTHO05D008932 1.4e-11 73.9 89 48.3
Mapoly0013s0010 Marchantia polymorpha HOM05D007223 ORTHO05D008932 1.3e-09 67.4 79 41.8
SMO170G0055 Selaginella moellendorffii HOM05D058183 ORTHO05D008932 2.9e-09 66.2 94 46.8
SMO141G0094 Selaginella moellendorffii HOM05D058183 ORTHO05D008932 3.7e-09 65.9 94 46.8
CBR_g19697 Chara braunii HOM05D000117 ORTHO05D008932 4.9e-09 65.5 91 38.5
Aqoxy7G03081 Aquilegia oxysepala HOM05D007223 ORTHO05D008932 3.5e-07 59.3 47 63.8
CBR_g39692 Chara braunii HOM05D000117 ORTHO05D000070 3.5e-07 59.3 83 37.3
AagrBONN_evm.TU.Sc2ySwM_117.1187 Anthoceros agrestis HOM05D007223 ORTHO05D008932 1.0e-06 57.8 80 43.8


User provided reference genes

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