Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_22079 Corylus avellana HOM05D006410 ORTHO05D007914 1.4e-196 689.5 354 100.0
Cfa013491 Carpinus fangiana HOM05D006410 ORTHO05D007914 1.2e-181 639.8 354 94.1
CiPaw.10G165500 Carya illinoinensis HOM05D006410 ORTHO05D007914 2.8e-133 479.2 360 72.5
QL07p031892 Quercus lobata HOM05D006410 ORTHO05D007914 9.9e-123 444.1 375 68.5
Prupe.6G295400 Prunus persica HOM05D006410 ORTHO05D007914 7.9e-112 407.9 401 57.4
MD04G1175900 Malus domestica HOM05D006410 ORTHO05D007914 1.3e-103 380.6 402 53.0
RcHm_v2.0_Chr3g0460291 Rosa chinensis HOM05D006410 ORTHO05D007914 1.8e-100 370.2 385 56.1
FAN09G0831 Fragaria x ananassa HOM05D006410 ORTHO05D007914 1.0e-98 364.4 372 57.5
FvH4_6g09660 Fragaria vesca HOM05D006410 ORTHO05D007914 3.8e-98 362.5 371 56.3
FAN02G1808 Fragaria x ananassa HOM05D006410 ORTHO05D007914 5.0e-98 362.1 371 56.3
FAN05G4204 Fragaria x ananassa HOM05D006410 ORTHO05D007914 5.0e-98 362.1 372 56.7
GSVIVG01030169001 Vitis vinifera HOM05D006410 ORTHO05D007914 5.0e-98 362.1 382 55.8
MD12G1190300 Malus domestica HOM05D006410 ORTHO05D007914 4.6e-96 355.5 405 51.9
TAR633G1493 Trochodendron aralioides HOM05D006410 ORTHO05D007914 1.9e-94 350.1 447 49.7
Dinv16966 Davidia involucrata HOM05D006410 ORTHO05D007914 2.8e-93 346.3 232 78.4
Manes.09G123200 Manihot esculenta HOM05D006410 ORTHO05D007914 4.8e-93 345.5 378 56.1
Potri.006G109500 Populus trichocarpa HOM05D006410 ORTHO05D007914 1.8e-92 343.6 374 55.3
Atru.chr8.91 Acer truncatum HOM05D006410 ORTHO05D007914 6.9e-92 341.7 360 55.6
Sabra06G0085200 Salix brachista HOM05D006410 ORTHO05D007914 1.0e-90 337.8 372 54.8
Ciclev10012138m.g Citrus clementina HOM05D006410 ORTHO05D007914 1.9e-89 333.6 355 55.5
PGR004G0643 Punica granatum HOM05D006410 ORTHO05D007914 4.7e-88 328.9 369 53.7
CsaV3_4G027230 Cucumis sativus L. HOM05D006410 ORTHO05D007914 1.0e-87 327.8 299 62.5
FAN14G0316 Fragaria x ananassa HOM05D006410 ORTHO05D007914 1.0e-87 327.8 316 60.8
COL.COLO4_03931 Corchorus olitorius HOM05D006410 ORTHO05D007914 7.4e-86 321.6 365 55.9
PSO339G1476 Papaver somniferum HOM05D006410 ORTHO05D007914 1.7e-85 320.5 375 51.7
Glyma.09G273700 Glycine max HOM05D006410 ORTHO05D007914 2.2e-85 320.1 399 50.4
VMungo1383G1039 Vigna mungo HOM05D006410 ORTHO05D007914 4.8e-85 318.9 387 50.4
Duzib212G0115 Durio zibethinus HOM05D006410 ORTHO05D007914 8.2e-85 318.2 362 55.0
Phvul.008G081500 Phaseolus vulgaris HOM05D006410 ORTHO05D007914 8.2e-85 318.2 385 50.1
ClCG04G006320 Citrullus lanatus HOM05D006410 ORTHO05D007914 1.1e-84 317.8 301 60.5
Lalb_Chr03g0043841 Lupinus albus HOM05D006410 ORTHO05D007914 3.1e-84 316.2 249 66.3
Glyma.18G212900 Glycine max HOM05D006410 ORTHO05D007914 4.1e-84 315.8 388 50.8
arahy.Tifrunner.gnm1.ann1.K0FU58 Arachis hypogaea HOM05D006410 ORTHO05D007914 1.2e-83 314.3 233 68.7
arahy.Tifrunner.gnm1.ann1.LV5WBC Arachis hypogaea HOM05D006410 ORTHO05D007914 1.2e-83 314.3 233 68.2
TWI77G0542 Tripterygium wilfordii HOM05D006410 ORTHO05D007914 1.2e-83 314.3 371 54.2
Psat3g118640 Pisum sativum HOM05D006410 ORTHO05D007914 1.5e-83 313.9 346 53.8
Rhsim05G0231700 Rhododendron simsii HOM05D006410 ORTHO05D007914 1.5e-83 313.9 284 62.3
Thecc.04G150000 Theobroma cacao HOM05D006410 ORTHO05D007914 2.6e-83 313.2 361 54.6
Medtr7g073510 Medicago truncatula HOM05D006410 ORTHO05D007914 3.4e-83 312.8 399 49.1
Lj1g0017463 Lotus japonicus HOM05D006410 ORTHO05D007914 1.0e-82 311.2 386 50.8
Lsat_1_v5_gn_9_39501 Lactuca sativa HOM05D006410 ORTHO05D007914 3.8e-82 309.3 295 58.3
TPR.G24331 Trifolium pratense HOM05D006410 ORTHO05D007914 5.0e-82 308.9 314 58.0
Sopen10g035110 Solanum pennellii HOM05D006410 ORTHO05D007914 1.9e-81 307.0 383 48.8
ECA247G0827 Erigeron canadensis HOM05D006410 ORTHO05D007914 2.5e-81 306.6 235 69.8
Solyc10g085690.2 Solanum lycopersicum HOM05D006410 ORTHO05D007914 3.2e-81 306.2 375 49.6
CANSAT21G1321 Cannabis sativa HOM05D006410 ORTHO05D007914 3.6e-80 302.8 371 51.8
PSO384G4459 Papaver somniferum HOM05D006410 ORTHO05D007914 3.6e-80 302.8 242 67.4
Eucgr.J00376 Eucalyptus grandis HOM05D006410 ORTHO05D007914 8.0e-80 301.6 300 58.3
Eucgr.G01626 Eucalyptus grandis HOM05D006410 ORTHO05D007914 1.8e-79 300.4 254 65.0
HanXRQChr15g0464751 Helianthus annuus HOM05D006410 ORTHO05D007914 1.8e-79 300.4 391 49.4
Eucgr.A00566 Eucalyptus grandis HOM05D006410 ORTHO05D007914 2.3e-79 300.1 300 58.0
CAN.G1018.3 Capsicum annuum HOM05D006410 ORTHO05D007914 5.2e-79 298.9 362 48.9
Eucgr.H04867 Eucalyptus grandis HOM05D006410 ORTHO05D007914 7.4e-78 295.0 223 69.5
Eucgr.K01292 Eucalyptus grandis HOM05D006410 ORTHO05D007914 7.4e-78 295.0 395 48.4
Gorai.005G003500 Gossypium raimondii HOM05D006410 ORTHO05D007914 7.4e-78 295.0 356 52.0
Nitab4.5_0009611g0010 Nicotiana tabacum HOM05D006410 ORTHO05D007914 9.7e-78 294.7 370 50.5
Peaxi162Scf00146g01120 Petunia axillaris HOM05D006410 ORTHO05D007914 1.3e-77 294.3 247 61.9
Eucgr.G00130 Eucalyptus grandis HOM05D006410 ORTHO05D007914 1.7e-77 293.9 295 58.6
Gohir.D02G003000 Gossypium hirsutum HOM05D006410 ORTHO05D007914 3.7e-77 292.7 356 51.7
Actinidia20795 Actinidia chinensis HOM05D006410 ORTHO05D007914 4.8e-77 292.4 228 69.3
vmacro20378 Vaccinium macrocarpon HOM05D006410 ORTHO05D007914 1.1e-76 291.2 280 61.1
Gohir.A02G002700 Gossypium hirsutum HOM05D006410 ORTHO05D007914 1.8e-76 290.4 361 51.5
Hma1.2p1_0537F.1_g174300 Hydrangea macrophylla HOM05D006410 ORTHO05D007914 4.1e-76 289.3 230 67.0
Aqoxy4G03284 Aquilegia oxysepala HOM05D006410 ORTHO05D007914 1.6e-75 287.3 384 48.4
arahy.Tifrunner.gnm1.ann1.2Y9ZDG Arachis hypogaea HOM05D006410 ORTHO05D007914 6.5e-74 282.0 308 54.5
Nitab4.5_0000381g0170 Nicotiana tabacum HOM05D006410 ORTHO05D007914 9.4e-73 278.1 403 46.4
CDE04G0338 Ceratophyllum demersum HOM05D006410 ORTHO05D007914 2.7e-72 276.6 290 55.9
Nn2g10260 Nelumbo nucifera HOM05D006410 ORTHO05D007914 2.7e-72 276.6 351 48.4
Cc06_g00300 Coffea canephora HOM05D006410 ORTHO05D007914 1.5e-70 270.8 291 56.4
MSTRG.5489 Avicennia marina HOM05D006410 ORTHO05D007914 1.7e-69 267.3 298 55.0
Thhalv10017800m.g Eutrema salsugineum HOM05D006410 ORTHO05D007914 4.8e-69 265.8 289 57.1
EL10Ac7g17116 Beta vulgaris HOM05D006410 ORTHO05D007914 1.8e-68 263.8 311 51.4
AUR62029781 Chenopodium quinoa HOM05D006410 ORTHO05D007914 1.8e-68 263.8 305 50.2
BcaB01g03675 Brassica carinata HOM05D006410 ORTHO05D007914 1.0e-66 258.1 239 60.7
SalBow5G5142 Salvia bowleyana HOM05D006410 ORTHO05D007914 2.9e-66 256.5 290 54.1
THA.LOC104806212 Tarenaya hassleriana HOM05D006410 ORTHO05D007914 3.8e-66 256.1 190 69.5
Zm00001eb395200 Zea mays HOM05D006410 ORTHO05D007914 3.8e-66 256.1 220 59.1
Hund19754 Selenicereus undatus HOM05D006410 ORTHO05D007914 8.5e-66 255.0 316 49.7
Carub.0004s2056 Capsella rubella HOM05D006410 ORTHO05D007914 2.5e-65 253.4 251 58.2
ATR1127G206 Amborella trichopoda HOM05D006410 ORTHO05D007914 5.5e-65 252.3 302 50.3
arahy.Tifrunner.gnm1.ann1.PEH6CG Arachis hypogaea HOM05D006410 ORTHO05D007914 7.2e-65 251.9 218 63.3
arahy.Tifrunner.gnm1.ann1.A09QMR Arachis hypogaea HOM05D006410 ORTHO05D007914 9.4e-65 251.5 251 57.0
Sc07g0005960 Simmondsia chinensis HOM05D006410 ORTHO05D007914 9.4e-65 251.5 210 64.3
CARHR133250 Cardamine hirsuta HOM05D006410 ORTHO05D007914 1.6e-64 250.8 258 58.5
BcaC01g05529 Brassica carinata HOM05D006410 ORTHO05D007914 2.7e-64 250.0 229 60.7
BolC3t14920H Brassica oleracea HOM05D006410 ORTHO05D007914 2.7e-64 250.0 229 60.7
HPP92_026801 Vanilla planifolia HOM05D006410 ORTHO05D007914 2.7e-64 250.0 260 53.1
HPP92_000776 Vanilla planifolia HOM05D006410 ORTHO05D007914 6.1e-64 248.8 260 52.7
BraA03t11374Z Brassica rapa HOM05D006410 ORTHO05D007914 1.0e-63 248.1 296 50.0
AL4G35850 Arabidopsis lyrata HOM05D006410 ORTHO05D007914 1.8e-63 247.3 231 60.2
A03p21390 Brassica napus HOM05D006410 ORTHO05D007914 1.8e-63 247.3 218 62.4
AT2G38570 Arabidopsis thaliana HOM05D006410 ORTHO05D007914 3.0e-63 246.5 202 67.3
C03p25260 Brassica napus HOM05D006410 ORTHO05D007914 3.0e-63 246.5 229 59.8
Sp4g20910 Schrenkiella parvula HOM05D006410 ORTHO05D007914 1.7e-61 240.7 343 46.6
SGA_v2.0_scaffold85G26601 Striga asiatica HOM05D006410 ORTHO05D007914 2.5e-57 226.9 322 45.7
Lj3A940G60 Lonicera japonica HOM05D006410 ORTHO05D007914 3.3e-57 226.5 138 82.6
Ca_07767_v3 Cicer arietinum L. HOM05D006410 ORTHO05D007914 2.2e-53 213.8 194 60.8
CSS0050432 Camellia sinensis var. sinensis HOM05D006410 ORTHO05D007914 4.9e-53 212.6 239 55.2
SEGI_21416 Sequoiadendron giganteum HOM05D006410 ORTHO05D007914 3.1e-52 209.9 337 38.0
Cpa.g.sc86.77 Carica papaya HOM05D006410 ORTHO05D007914 7.8e-51 205.3 314 45.5
CSS0030024 Camellia sinensis var. sinensis HOM05D006410 ORTHO05D007914 5.0e-50 202.6 155 69.7
Ca_07774_v3 Cicer arietinum L. HOM05D006410 ORTHO05D007914 2.5e-49 200.3 218 54.1
SalBow5G0627 Salvia bowleyana HOM05D006410 ORTHO05D007914 3.3e-49 199.9 188 59.6
BcaB01g00971 Brassica carinata HOM05D006410 ORTHO05D007914 8.0e-48 195.3 178 62.4
MELO3C025226.2 Cucumis melo HOM05D006410 ORTHO05D007914 4.3e-41 172.9 178 56.7
arahy.Tifrunner.gnm1.ann1.CPU7B3 Arachis hypogaea HOM05D006410 ORTHO05D007914 2.1e-40 170.6 191 51.3
AagrBONN_evm.TU.Sc2ySwM_344.4011 Anthoceros agrestis HOM05D006410 ORTHO05D007914 3.2e-36 156.8 226 40.3
CSS0025367 Camellia sinensis var. sinensis HOM05D006410 ORTHO05D007914 8.6e-34 148.7 163 56.4
RhsimUnG0084100 Rhododendron simsii HOM05D006410 ORTHO05D007914 7.3e-33 145.6 178 55.1
Os03g0334100 Oryza sativa ssp. japonica HOM05D006410 ORTHO05D007914 8.1e-32 142.1 101 69.3
RhsimUnG0080900 Rhododendron simsii HOM05D006410 ORTHO05D007914 1.4e-31 141.4 176 53.4
Sed0027859 Sechium edule HOM05D006410 ORTHO05D007914 2.0e-30 137.5 253 40.7
MCO09G517 Micromonas commoda HOM05D006410 ORTHO05D007914 1.2e-24 118.2 194 35.1
CBR_g644 Chara braunii HOM05D006410 ORTHO05D007914 2.4e-20 104.0 174 35.1
Duzib151G0462 Durio zibethinus HOM05D006410 ORTHO05D007914 5.4e-20 102.8 61 80.3
Haze_22077 Corylus avellana HOM05D006410 ORTHO05D007914 6.6e-18 95.9 62 82.3
SEGI_07330 Sequoiadendron giganteum HOM05D006410 ORTHO05D007914 1.2e-14 85.1 191 33.5
CDE04G1109 Ceratophyllum demersum HOM05D040252 ORTHO05D007914 2.6e-14 84.0 55 76.4
Lsat_1_v5_gn_8_97960 Lactuca sativa HOM05D006410 ORTHO05D007914 6.4e-13 79.3 56 71.4
Cre17.g738200 Chlamydomonas reinhardtii HOM05D006410 ORTHO05D007914 3.3e-09 67.0 182 29.7
CSS0000421 Camellia sinensis var. sinensis HOM05D006410 ORTHO05D007914 5.6e-09 66.2 215 30.7
Oeu030096.1 Olea europaea HOM05D006410 ORTHO05D007914 5.3e-07 59.7 131 38.2
Eucgr.E03158 Eucalyptus grandis HOM05D006410 ORTHO05D007914 1.5e-06 58.2 109 42.2


User provided reference genes

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