Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_22050 Corylus avellana HOM05D006260 ORTHO05D007860 1.6e-86 322.8 174 100.0
CiPaw.08G031300 Carya illinoinensis HOM05D006260 ORTHO05D007860 1.9e-79 299.3 174 90.2
ClCG06G013810 Citrullus lanatus HOM05D006260 ORTHO05D007860 2.1e-73 279.3 177 84.2
CANSAT11G1813 Cannabis sativa HOM05D006260 ORTHO05D007860 1.1e-71 273.5 172 82.0
MELO3C017413.2 Cucumis melo HOM05D006260 ORTHO05D007860 1.9e-71 272.7 177 81.9
CANSAT21G0469 Cannabis sativa HOM05D006260 ORTHO05D007860 3.3e-71 271.9 164 82.9
CsaV3_1G032030 Cucumis sativus L. HOM05D006260 ORTHO05D007860 4.3e-71 271.6 174 83.3
RcHm_v2.0_Chr4g0398801 Rosa chinensis HOM05D006260 ORTHO05D007860 5.7e-71 271.2 174 83.9
Potri.018G139600 Populus trichocarpa HOM05D006260 ORTHO05D007860 2.8e-70 268.9 177 79.7
Prupe.1G072000 Prunus persica HOM05D006260 ORTHO05D007860 2.8e-70 268.9 172 82.0
MD16G1245000 Malus domestica HOM05D006260 ORTHO05D007860 4.8e-70 268.1 170 81.8
Sed0022699 Sechium edule HOM05D006260 ORTHO05D007860 4.8e-70 268.1 178 79.8
MSTRG.19359 Avicennia marina HOM05D006260 ORTHO05D007860 8.2e-70 267.3 166 82.5
Atru.chr7.896 Acer truncatum HOM05D006260 ORTHO05D007860 1.4e-69 266.5 174 79.3
Thecc.09G192000 Theobroma cacao HOM05D006260 ORTHO05D007860 1.4e-69 266.5 176 77.3
FvH4_4g06900 Fragaria vesca HOM05D006260 ORTHO05D007860 2.4e-69 265.8 178 80.3
Lj5A659T18 Lonicera japonica HOM05D006260 ORTHO05D007860 2.4e-69 265.8 172 79.1
COL.COLO4_14462 Corchorus olitorius HOM05D006260 ORTHO05D007860 3.1e-69 265.4 173 78.0
Manes.14G161300 Manihot esculenta HOM05D006260 ORTHO05D007860 3.1e-69 265.4 168 82.7
Eucgr.C00083 Eucalyptus grandis HOM05D006260 ORTHO05D007860 5.3e-69 264.6 174 81.0
MD16G1244900 Malus domestica HOM05D006260 ORTHO05D007860 5.3e-69 264.6 163 85.9
GSVIVG01029271001 Vitis vinifera HOM05D006260 ORTHO05D007860 6.9e-69 264.2 174 78.7
FAN22G1136 Fragaria x ananassa HOM05D006260 ORTHO05D007860 1.2e-68 263.5 171 81.9
CiPaw.07G199300 Carya illinoinensis HOM05D006260 ORTHO05D007860 1.5e-68 263.1 153 90.2
FAN07G2370 Fragaria x ananassa HOM05D006260 ORTHO05D007860 1.5e-68 263.1 175 80.0
FAN12G1915 Fragaria x ananassa HOM05D006260 ORTHO05D007860 2.0e-68 262.7 175 80.0
PGR018G0003 Punica granatum HOM05D006260 ORTHO05D007860 2.6e-68 262.3 180 75.0
PGR142G0891 Punica granatum HOM05D006260 ORTHO05D007860 2.6e-68 262.3 180 75.0
PGR142G1877 Punica granatum HOM05D006260 ORTHO05D007860 2.6e-68 262.3 180 75.0
unitig_8.g4053 Utricularia gibba HOM05D006260 ORTHO05D007860 4.5e-68 261.5 158 84.2
SalBow3G0163 Salvia bowleyana HOM05D006260 ORTHO05D007860 5.9e-68 261.2 164 80.5
Ciclev10009690m.g Citrus clementina HOM05D006260 ORTHO05D007860 7.6e-68 260.8 174 75.9
Migut.J00776 Erythranthe guttata HOM05D006260 ORTHO05D007860 1.0e-67 260.4 168 78.6
Hma1.2p1_0478F.1_g161140 Hydrangea macrophylla HOM05D006260 ORTHO05D007860 1.0e-67 260.4 170 76.5
Lalb_Chr23g0276701 Lupinus albus HOM05D006260 ORTHO05D007860 1.3e-67 260.0 170 74.1
Oeu043898.1 Olea europaea HOM05D006260 ORTHO05D007860 1.3e-67 260.0 179 74.9
Potri.006G072600 Populus trichocarpa HOM05D006260 ORTHO05D007860 1.3e-67 260.0 176 77.3
Cc05_g06400 Coffea canephora HOM05D006260 ORTHO05D007860 1.7e-67 259.6 174 75.9
Thhalv10026375m.g Eutrema salsugineum HOM05D006260 ORTHO05D007860 1.7e-67 259.6 175 76.0
TWI63G0540 Tripterygium wilfordii HOM05D006260 ORTHO05D007860 1.7e-67 259.6 174 75.9
AL7G22380 Arabidopsis lyrata HOM05D006260 ORTHO05D007860 2.2e-67 259.2 174 74.7
MBI14_g10729_MAGBIO Magnolia biondii HOM05D006260 ORTHO05D007860 2.2e-67 259.2 173 76.3
Phvul.009G234400 Phaseolus vulgaris HOM05D006260 ORTHO05D007860 2.2e-67 259.2 174 78.2
Lj5A660T21 Lonicera japonica HOM05D006260 ORTHO05D007860 2.9e-67 258.8 170 78.8
Lj5A667T13 Lonicera japonica HOM05D006260 ORTHO05D007860 2.9e-67 258.8 172 78.5
Sp7g27680 Schrenkiella parvula HOM05D006260 ORTHO05D007860 2.9e-67 258.8 175 74.9
Glyma.15G167900 Glycine max HOM05D006260 ORTHO05D007860 3.8e-67 258.5 177 76.8
Solyc05g006080.1 Solanum lycopersicum HOM05D006260 ORTHO05D007860 5.0e-67 258.1 179 75.4
Sopen05g002100 Solanum pennellii HOM05D006260 ORTHO05D007860 5.0e-67 258.1 179 75.4
PGSC0003DMG400015598 Solanum tuberosum HOM05D006260 ORTHO05D007860 6.5e-67 257.7 179 74.9
SGA_v2.0_scaffold31G12783 Striga asiatica HOM05D006260 ORTHO05D007860 6.5e-67 257.7 156 82.7
AT4G29870 Arabidopsis thaliana HOM05D006260 ORTHO05D007860 8.5e-67 257.3 174 74.7
Glyma.09G061600 Glycine max HOM05D006260 ORTHO05D007860 8.5e-67 257.3 154 84.4
C01p09330 Brassica napus HOM05D006260 ORTHO05D007860 1.1e-66 256.9 174 71.3
BolC1t00921H Brassica oleracea HOM05D006260 ORTHO05D007860 1.1e-66 256.9 174 71.3
CARHR237780 Cardamine hirsuta HOM05D006260 ORTHO05D007860 1.4e-66 256.5 175 75.4
Oeu012389.1 Olea europaea HOM05D006260 ORTHO05D007860 2.5e-66 255.8 177 75.1
TWI38G0675 Tripterygium wilfordii HOM05D006260 ORTHO05D007860 2.5e-66 255.8 172 76.2
Aa31LG2G20680 Aethionema arabicum HOM05D006260 ORTHO05D007860 4.2e-66 255.0 173 75.1
Carub.0004s1476 Capsella rubella HOM05D006260 ORTHO05D007860 4.2e-66 255.0 178 73.6
CAN.G1341.6 Capsicum annuum HOM05D006260 ORTHO05D007860 4.2e-66 255.0 173 75.1
Lj6g0019941 Lotus japonicus HOM05D006260 ORTHO05D007860 4.2e-66 255.0 178 76.4
Ah.14g085330 Amaranthus hybridus HOM05D006260 ORTHO05D007860 5.5e-66 254.6 166 78.3
Nitab4.5_0000257g0210 Nicotiana tabacum HOM05D006260 ORTHO05D007860 5.5e-66 254.6 179 74.3
TPR.G2550 Trifolium pratense HOM05D006260 ORTHO05D007860 7.2e-66 254.2 178 75.3
A01p08290 Brassica napus HOM05D006260 ORTHO05D007860 9.3e-66 253.8 174 70.7
BraA01t00777Z Brassica rapa HOM05D006260 ORTHO05D007860 9.3e-66 253.8 174 70.7
A03p59290 Brassica napus HOM05D006260 ORTHO05D007860 1.2e-65 253.4 164 74.4
BraA03t14986Z Brassica rapa HOM05D006260 ORTHO05D007860 1.2e-65 253.4 164 74.4
Carub.0003s3356 Capsella rubella HOM05D006260 ORTHO05D007860 1.2e-65 253.4 177 71.8
CDE07G0891 Ceratophyllum demersum HOM05D006260 ORTHO05D007860 1.2e-65 253.4 154 81.8
CARHR109790 Cardamine hirsuta HOM05D006260 ORTHO05D007860 1.6e-65 253.1 175 73.7
Gohir.A05G408800 Gossypium hirsutum HOM05D006260 ORTHO05D007860 2.1e-65 252.7 176 73.9
CSS0028862 Camellia sinensis var. sinensis HOM05D006260 ORTHO05D007860 2.7e-65 252.3 178 72.5
Nitab4.5_0009368g0010 Nicotiana tabacum HOM05D006260 ORTHO05D007860 2.7e-65 252.3 179 73.7
ATR0580G108 Amborella trichopoda HOM05D006260 ORTHO05D007860 4.6e-65 251.5 174 74.7
Rhsim01G0114100 Rhododendron simsii HOM05D006260 ORTHO05D007860 4.6e-65 251.5 164 76.2
Gohir.A05G409000 Gossypium hirsutum HOM05D006260 ORTHO05D007860 6.1e-65 251.1 173 72.3
Gohir.D04G006400 Gossypium hirsutum HOM05D006260 ORTHO05D007860 7.9e-65 250.8 176 73.3
Gorai.012G007800 Gossypium raimondii HOM05D006260 ORTHO05D007860 7.9e-65 250.8 176 73.3
Psat1g142480 Pisum sativum HOM05D006260 ORTHO05D007860 7.9e-65 250.8 161 78.3
vmacro20799 Vaccinium macrocarpon HOM05D006260 ORTHO05D007860 7.9e-65 250.8 175 70.9
BolC7t46199H Brassica oleracea HOM05D006260 ORTHO05D007860 1.0e-64 250.4 164 73.2
Medtr2g038390 Medicago truncatula HOM05D006260 ORTHO05D007860 1.3e-64 250.0 174 74.7
C07p57300 Brassica napus HOM05D006260 ORTHO05D007860 1.8e-64 249.6 164 73.2
Gohir.D04G006600 Gossypium hirsutum HOM05D006260 ORTHO05D007860 2.3e-64 249.2 176 72.7
Gorai.012G008000 Gossypium raimondii HOM05D006260 ORTHO05D007860 2.3e-64 249.2 176 72.7
Ah.09g228540 Amaranthus hybridus HOM05D006260 ORTHO05D007860 1.1e-63 246.9 155 76.8
TAR383G0359 Trochodendron aralioides HOM05D006260 ORTHO05D007860 1.1e-63 246.9 158 77.2
SGA_v2.0_scaffold112G31634 Striga asiatica HOM05D006260 ORTHO05D007860 2.5e-63 245.7 151 81.5
Lsat_1_v5_gn_7_55181 Lactuca sativa HOM05D006260 ORTHO05D007860 3.3e-63 245.4 153 80.4
Aqoxy7G02900 Aquilegia oxysepala HOM05D006260 ORTHO05D007860 7.4e-63 244.2 173 72.8
Manes.06G017400 Manihot esculenta HOM05D006260 ORTHO05D007860 7.4e-63 244.2 144 86.1
Ca_02129_v3 Cicer arietinum L. HOM05D006260 ORTHO05D007860 9.7e-63 243.8 151 81.5
AUR62027428 Chenopodium quinoa HOM05D006260 ORTHO05D007860 2.8e-62 242.3 147 81.6
Peaxi162Scf00421g00071 Petunia axillaris HOM05D006260 ORTHO05D007860 2.8e-62 242.3 157 75.8
DCAR_018008 Daucus carota HOM05D006260 ORTHO05D007860 3.1e-61 238.8 153 78.4
Sc18g0003820 Simmondsia chinensis HOM05D006260 ORTHO05D007860 6.9e-61 237.7 164 74.4
HanXRQChr09g0245351 Helianthus annuus HOM05D006260 ORTHO05D007860 9.1e-61 237.3 153 78.4
AT2G19340 Arabidopsis thaliana HOM05D006260 ORTHO05D007860 2.6e-60 235.7 160 71.2
SHI03067 Sapria himalayana HOM05D006260 ORTHO05D007860 3.4e-60 235.3 156 75.6
HPP92_027392 Vanilla planifolia HOM05D006260 ORTHO05D007860 1.3e-59 233.4 176 69.3
QL02p064675 Quercus lobata HOM05D006260 ORTHO05D007860 3.8e-59 231.9 167 75.4
FAN17G2269 Fragaria x ananassa HOM05D006260 ORTHO05D007860 1.1e-58 230.3 153 79.7
CDE06G1002 Ceratophyllum demersum HOM05D006260 ORTHO05D007860 2.1e-57 226.1 138 79.7
Zm00001eb169590 Zea mays HOM05D006260 ORTHO05D007860 2.1e-57 226.1 154 72.7
Zm00001eb112720 Zea mays HOM05D006260 ORTHO05D007860 6.1e-57 224.6 154 71.4
Cpa.g.sc115.60 Carica papaya HOM05D006260 ORTHO05D007860 6.9e-53 211.1 118 91.5
Mapoly0039s0076 Marchantia polymorpha HOM05D006260 ORTHO05D007860 4.5e-52 208.4 152 70.4
Sed0019929 Sechium edule HOM05D006260 ORTHO05D007860 4.5e-52 208.4 134 77.6
PSO170G1526 Papaver somniferum HOM05D006260 ORTHO05D007860 5.9e-52 208.0 131 79.4
Sabra06G0054000 Salix brachista HOM05D006260 ORTHO05D007860 3.2e-50 202.2 120 87.5
TAR626G1894 Trochodendron aralioides HOM05D006260 ORTHO05D007860 3.2e-50 202.2 120 85.8
SEGI_37789 Sequoiadendron giganteum HOM05D006260 ORTHO05D007860 2.0e-47 193.0 155 64.5
CBR_g37526 Chara braunii HOM05D006260 ORTHO05D007860 2.6e-47 192.6 153 62.1
SMO329G0049 Selaginella moellendorffii HOM05D006260 ORTHO05D007860 2.6e-47 192.6 154 63.0
Sabra18G0114100 Salix brachista HOM05D006260 ORTHO05D007860 4.8e-46 188.3 108 89.8
AUR62031268 Chenopodium quinoa HOM05D006260 ORTHO05D007860 6.3e-46 188.0 107 86.9
EL10Ac8g19294 Beta vulgaris HOM05D006260 ORTHO05D007860 2.0e-44 183.0 107 85.0
ECA240G0773 Erigeron canadensis HOM05D006260 ORTHO05D007860 1.7e-43 179.9 121 76.0
Pp3c5_8110 Physcomitrium patens HOM05D006260 ORTHO05D007860 1.1e-42 177.2 131 66.4
AagrBONN_evm.TU.Sc2ySwM_362.1716 Anthoceros agrestis HOM05D006260 ORTHO05D007860 5.5e-42 174.9 152 57.2
BcaNung00497 Brassica carinata HOM05D006260 ORTHO05D007860 1.4e-40 170.2 129 69.0
Lj5C609T1 Lonicera japonica HOM05D006260 ORTHO05D007860 3.8e-35 152.1 91 82.4
Cre12.g528150 Chlamydomonas reinhardtii HOM05D006260 ORTHO05D007860 4.5e-28 128.6 123 48.8
TWI39G0723 Tripterygium wilfordii HOM05D006260 ORTHO05D007860 1.8e-16 90.1 106 53.8
MD13G1241300 Malus domestica HOM05D006260 ORTHO05D249159 9.2e-13 77.8 118 50.0


User provided reference genes

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