Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_22049 Corylus avellana HOM05D005927 ORTHO05D006952 1.5e-32 142.1 67 100.0
Solyc09g092235.1 Solanum lycopersicum HOM05D005927 ORTHO05D006952 6.9e-09 63.5 62 58.1
PGSC0003DMG400026439 Solanum tuberosum HOM05D005927 ORTHO05D006952 2.0e-08 62.0 66 54.5
Thecc.04G193700 Theobroma cacao HOM05D005927 ORTHO05D006952 2.0e-08 62.0 62 54.8
Hma1.2p1_0349F.1_g131980 Hydrangea macrophylla HOM05D005927 ORTHO05D006952 2.6e-08 61.6 63 54.0
Hma1.2p1_0349F.1_g132010 Hydrangea macrophylla HOM05D005927 ORTHO05D006952 2.6e-08 61.6 63 54.0
Hma1.2p1_2624F.1_g325620 Hydrangea macrophylla HOM05D005927 ORTHO05D006952 2.6e-08 61.6 63 54.0
Hma1.2p1_2624F.1_g325626 Hydrangea macrophylla HOM05D005927 ORTHO05D006952 2.6e-08 61.6 63 54.0
Sopen09g035160 Solanum pennellii HOM05D005927 ORTHO05D006952 2.6e-08 61.6 62 56.5
Lj4g0008619 Lotus japonicus HOM05D005927 ORTHO05D006952 7.6e-08 60.1 62 53.2
TWI09G0897 Tripterygium wilfordii HOM05D005927 ORTHO05D006952 1.0e-07 59.7 61 54.1
FvH4_4g13190 Fragaria vesca HOM05D005927 ORTHO05D006952 1.3e-07 59.3 62 53.2
FAN07G0035 Fragaria x ananassa HOM05D005927 ORTHO05D006952 1.3e-07 59.3 62 53.2
FAN12G2699 Fragaria x ananassa HOM05D005927 ORTHO05D006952 1.3e-07 59.3 62 53.2
Psat7g076040 Pisum sativum HOM05D005927 ORTHO05D006952 1.3e-07 59.3 63 52.4
COL.COLO4_05438 Corchorus olitorius HOM05D005927 ORTHO05D006952 2.9e-07 58.2 62 53.2
Nitab4.5_0019370g0010 Nicotiana tabacum HOM05D005927 ORTHO05D006952 2.9e-07 58.2 51 58.8
TPR.G11873 Trifolium pratense HOM05D005927 ORTHO05D006952 4.9e-07 57.4 62 51.6
Gohir.A10G129100 Gossypium hirsutum HOM05D005927 ORTHO05D006952 6.5e-07 57.0 62 53.2
Gohir.D10G137100 Gossypium hirsutum HOM05D005927 ORTHO05D006952 6.5e-07 57.0 62 53.2
Gorai.011G152200 Gossypium raimondii HOM05D005927 ORTHO05D006952 6.5e-07 57.0 62 53.2
Medtr8g083150 Medicago truncatula HOM05D005927 ORTHO05D006952 8.4e-07 56.6 62 51.6
VMungo0251G3792 Vigna mungo HOM05D005927 ORTHO05D006952 8.4e-07 56.6 62 53.2
arahy.Tifrunner.gnm1.ann1.6R0Q3T Arachis hypogaea HOM05D005927 ORTHO05D006952 1.1e-06 56.2 62 51.6
FAN17G1175 Fragaria x ananassa HOM05D005927 ORTHO05D006952 1.1e-06 56.2 62 51.6
MD04G1018100 Malus domestica HOM05D005927 ORTHO05D006952 1.1e-06 56.2 62 51.6
Prupe.1G167100 Prunus persica HOM05D005927 ORTHO05D006952 1.1e-06 56.2 62 53.2
RcHm_v2.0_Chr4g0413341 Rosa chinensis HOM05D005927 ORTHO05D006952 1.1e-06 56.2 67 52.2
Atru.chr4.1553 Acer truncatum HOM05D005927 ORTHO05D006952 1.4e-06 55.8 62 54.8
Eucgr.H02655 Eucalyptus grandis HOM05D005927 ORTHO05D006952 1.4e-06 55.8 63 47.6
Manes.05G201886 Manihot esculenta HOM05D005927 ORTHO05D006952 1.4e-06 55.8 61 54.1
Lsat_1_v5_gn_2_47681 Lactuca sativa HOM05D005927 ORTHO05D006952 1.9e-06 55.5 62 48.4
arahy.Tifrunner.gnm1.ann1.N45PRE Arachis hypogaea HOM05D005927 ORTHO05D006952 2.5e-06 55.1 62 53.2
CSS0025530 Camellia sinensis var. sinensis HOM05D005927 ORTHO05D006952 2.5e-06 55.1 62 53.2
CSS0046414 Camellia sinensis var. sinensis HOM05D005927 ORTHO05D006952 2.5e-06 55.1 62 50.0
Ca_17999_v3 Cicer arietinum L. HOM05D000324 ORTHO05D004875 2.5e-06 55.1 62 50.0
CsaV3_3G015740 Cucumis sativus L. HOM05D005927 ORTHO05D006952 2.5e-06 55.1 64 53.1
Phvul.003G051400 Phaseolus vulgaris HOM05D005927 ORTHO05D006952 3.2e-06 54.7 62 51.6
Ciclev10006262m.g Citrus clementina HOM05D005927 ORTHO05D006952 4.2e-06 54.3 62 53.2
Rhsim09G0061200 Rhododendron simsii HOM05D005927 ORTHO05D006952 9.3e-06 53.1 62 54.8
Sabra17G0053700 Salix brachista HOM05D005927 ORTHO05D006952 9.3e-06 53.1 51 56.9


User provided reference genes

Program Settings