Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_22044 Corylus avellana HOM05D005890 ORTHO05D006717 1.6e-128 463.0 271 100.0
Cfa013466 Carpinus fangiana HOM05D005890 ORTHO05D006717 8.2e-101 370.9 240 93.3
QL07p048247 Quercus lobata HOM05D005890 ORTHO05D006717 8.0e-40 168.3 278 44.6
CiPaw.07G198700 Carya illinoinensis HOM05D005890 ORTHO05D006717 3.1e-39 166.4 198 56.1
MD16G1246300 Malus domestica HOM05D005890 ORTHO05D006717 1.1e-33 147.9 221 46.2
Ciclev10008727m.g Citrus clementina HOM05D005890 ORTHO05D006717 7.3e-33 145.2 238 45.8
Sabra06G0054500 Salix brachista HOM05D005890 ORTHO05D006717 8.1e-32 141.7 269 46.5
CANSAT01G0113 Cannabis sativa HOM05D005890 ORTHO05D006717 1.2e-30 137.9 158 51.3
Dinv25461 Davidia involucrata HOM05D005890 ORTHO05D006717 4.4e-30 136.0 257 40.9
Dinv41195 Davidia involucrata HOM05D005890 ORTHO05D006717 8.3e-29 131.7 297 38.0
Potri.018G140200 Populus trichocarpa HOM05D005890 ORTHO05D006717 1.1e-28 131.3 214 43.5
Prupe.1G073000 Prunus persica HOM05D005890 ORTHO05D006717 1.2e-27 127.9 195 44.6
CSS0049336 Camellia sinensis var. sinensis HOM05D005890 ORTHO05D006717 1.6e-27 127.5 151 51.7
Glyma.17G058000 Glycine max HOM05D005890 ORTHO05D006717 2.1e-27 127.1 228 43.9
Atru.BG.17.p Acer truncatum HOM05D005890 ORTHO05D006717 6.6e-26 122.1 167 46.7
Thecc.09G191500 Theobroma cacao HOM05D005890 ORTHO05D006717 6.6e-26 122.1 187 44.4
Atru.chr7.926 Acer truncatum HOM05D005890 ORTHO05D006717 1.1e-25 121.3 167 46.7
CiPaw.08G031700 Carya illinoinensis HOM05D005890 ORTHO05D006717 1.5e-25 120.9 164 48.8
Cc03_g15250 Coffea canephora HOM05D005890 ORTHO05D006717 5.6e-25 119.0 148 50.0
Eucgr.C02214 Eucalyptus grandis HOM05D005890 ORTHO05D006717 1.6e-24 117.5 183 43.7
AUR62027422 Chenopodium quinoa HOM05D005890 ORTHO05D006717 2.1e-24 117.1 126 57.1
MELO3C006422.2 Cucumis melo HOM05D005890 ORTHO05D006717 6.2e-24 115.5 195 43.1
Manes.06G017800 Manihot esculenta HOM05D005890 ORTHO05D006717 1.1e-23 114.8 252 38.5
vmacro20806 Vaccinium macrocarpon HOM05D005890 ORTHO05D006717 1.1e-23 114.8 251 37.1
AUR62031274 Chenopodium quinoa HOM05D005890 ORTHO05D006717 1.4e-23 114.4 124 57.3
CsaV3_3G012070 Cucumis sativus L. HOM05D005890 ORTHO05D006717 1.4e-23 114.4 201 42.8
ClCG06G013720 Citrullus lanatus HOM05D005890 ORTHO05D006717 1.8e-23 114.0 196 43.9
MD13G1240600 Malus domestica HOM05D005890 ORTHO05D006717 4.0e-23 112.8 253 35.6
Sopen07g004220 Solanum pennellii HOM05D005890 ORTHO05D006717 4.0e-23 112.8 128 52.3
CAN.G403.1 Capsicum annuum HOM05D005890 ORTHO05D006717 5.2e-23 112.5 133 51.1
Peaxi162Scf00046g00417 Petunia axillaris HOM05D005890 ORTHO05D006717 6.8e-23 112.1 134 50.0
PGSC0003DMG400019897 Solanum tuberosum HOM05D005890 ORTHO05D006717 8.9e-23 111.7 128 52.3
DCAR_018014 Daucus carota HOM05D005890 ORTHO05D006717 1.2e-22 111.3 161 42.9
Duzib170G1164 Durio zibethinus HOM05D005890 ORTHO05D006717 1.2e-22 111.3 210 39.5
GSVIVG01029286001 Vitis vinifera HOM05D005890 ORTHO05D006717 1.2e-22 111.3 217 40.6
Nitab4.5_0004916g0020 Nicotiana tabacum HOM05D005890 ORTHO05D006717 2.0e-22 110.5 127 51.2
Oeu063100.1 Olea europaea HOM05D005890 ORTHO05D006717 2.6e-22 110.2 125 49.6
Rhsim01G0114500 Rhododendron simsii HOM05D005890 ORTHO05D006717 2.6e-22 110.2 241 35.7
CSS0049604 Camellia sinensis var. sinensis HOM05D005890 ORTHO05D006717 3.4e-22 109.8 183 42.1
Solyc07g008330.3 Solanum lycopersicum HOM05D005890 ORTHO05D006717 4.4e-22 109.4 128 51.6
Nitab4.5_0000028g0410 Nicotiana tabacum HOM05D005890 ORTHO05D006717 5.8e-22 109.0 109 56.9
Nn8g40670 Nelumbo nucifera HOM05D005890 ORTHO05D006717 2.9e-21 106.7 266 34.2
Actinidia02494 Actinidia chinensis HOM05D005890 ORTHO05D006717 7.1e-20 102.1 70 68.6
VMungo1215G0729 Vigna mungo HOM05D005890 ORTHO05D006717 9.2e-20 101.7 223 36.3
Sed0024384 Sechium edule HOM05D005890 ORTHO05D006717 1.2e-19 101.3 215 39.1
EL10Ac8g19296 Beta vulgaris HOM05D005890 ORTHO05D006717 1.6e-19 100.9 117 53.8
Medtr4g127160 Medicago truncatula HOM05D005890 ORTHO05D006717 1.6e-19 100.9 123 48.8
RcHm_v2.0_Chr4g0398981 Rosa chinensis HOM05D005890 ORTHO05D006717 1.6e-19 100.9 60 78.3
Lalb_Chr13g0299851 Lupinus albus HOM05D005890 ORTHO05D006717 2.7e-19 100.1 82 65.9
Gohir.A05G408300 Gossypium hirsutum HOM05D005890 ORTHO05D006717 4.6e-19 99.4 78 62.8
Potri.006G073100 Populus trichocarpa HOM05D005890 ORTHO05D006717 4.6e-19 99.4 263 43.3
Glyma.13G101600 Glycine max HOM05D005890 ORTHO05D006717 6.0e-19 99.0 224 38.4
Gorai.012G008900 Gossypium raimondii HOM05D005890 ORTHO05D006717 1.0e-18 98.2 78 62.8
Sp6g18850 Schrenkiella parvula HOM05D005890 ORTHO05D006717 1.0e-18 98.2 81 61.7
Hund24378 Selenicereus undatus HOM05D005890 ORTHO05D006717 1.0e-18 98.2 104 53.8
Aqoxy7G02888 Aquilegia oxysepala HOM05D005890 ORTHO05D006717 3.0e-18 96.7 226 36.3
COL.COLO4_08570 Corchorus olitorius HOM05D005890 ORTHO05D006717 3.9e-18 96.3 211 37.4
ECA240G0208 Erigeron canadensis HOM05D005890 ORTHO05D006717 6.6e-18 95.5 209 38.3
Hma1.2p1_0235F.1_g098760 Hydrangea macrophylla HOM05D005890 ORTHO05D006717 6.6e-18 95.5 228 36.4
FAN12G2329 Fragaria x ananassa HOM05D005890 ORTHO05D006717 8.7e-18 95.1 223 36.3
FAN17G2561 Fragaria x ananassa HOM05D005890 ORTHO05D006717 8.7e-18 95.1 192 40.1
THA.LOC104813501 Tarenaya hassleriana HOM05D005890 ORTHO05D006717 1.1e-17 94.7 81 63.0
THA.LOC104817770 Tarenaya hassleriana HOM05D005890 ORTHO05D006717 1.1e-17 94.7 77 66.2
Ah.14g085350 Amaranthus hybridus HOM05D005890 ORTHO05D006717 1.5e-17 94.4 144 45.1
PGR044G2166 Punica granatum HOM05D005890 ORTHO05D006717 1.5e-17 94.4 83 61.4
Sed0014693 Sechium edule HOM05D005890 ORTHO05D006717 1.5e-17 94.4 222 36.9
FAN07G1770 Fragaria x ananassa HOM05D005890 ORTHO05D006717 1.9e-17 94.0 192 39.1
TWI32G1283 Tripterygium wilfordii HOM05D005890 ORTHO05D006717 2.5e-17 93.6 270 33.0
Lj4g0027857 Lotus japonicus HOM05D005890 ORTHO05D006717 3.3e-17 93.2 222 42.3
Cpa.g.sc115.65 Carica papaya HOM05D005890 ORTHO05D006717 5.6e-17 92.4 239 41.0
TWI34G1560 Tripterygium wilfordii HOM05D005890 ORTHO05D006717 7.3e-17 92.0 122 45.1
PSO170G0082 Papaver somniferum HOM05D005890 ORTHO05D006717 1.2e-16 91.3 60 71.7
arahy.Tifrunner.gnm1.ann1.CB00ZF Arachis hypogaea HOM05D005890 ORTHO05D006717 2.1e-16 90.5 235 41.7
Psat4g014480 Pisum sativum HOM05D005890 ORTHO05D006717 2.8e-16 90.1 124 45.2
Sabra18G0114500 Salix brachista HOM05D005890 ORTHO05D006717 2.8e-16 90.1 186 36.6
Ca_21262_v3 Cicer arietinum L. HOM05D005890 ORTHO05D006717 3.6e-16 89.7 61 70.5
HanXRQChr03g0065401 Helianthus annuus HOM05D005890 ORTHO05D006717 3.6e-16 89.7 207 42.5
unitig_8.g3553 Utricularia gibba HOM05D005890 ORTHO05D006717 3.6e-16 89.7 124 46.0
ATR1098G092 Amborella trichopoda HOM05D005890 ORTHO05D006717 4.7e-16 89.4 238 35.7
HanXRQChr10g0308981 Helianthus annuus HOM05D005890 ORTHO05D006717 8.1e-16 88.6 115 48.7
Os12g0613500 Oryza sativa ssp. japonica HOM05D005890 ORTHO05D006717 8.1e-16 88.6 210 36.7
Aa31LG3G13020 Aethionema arabicum HOM05D005890 ORTHO05D006717 1.1e-15 88.2 81 56.8
arahy.Tifrunner.gnm1.ann1.V3N0NP Arachis hypogaea HOM05D005890 ORTHO05D006717 1.1e-15 88.2 234 41.0
Thhalv10013871m.g Eutrema salsugineum HOM05D005890 ORTHO05D006717 1.1e-15 88.2 107 47.7
PSO063G0609 Papaver somniferum HOM05D005890 ORTHO05D006717 1.4e-15 87.8 110 49.1
CARHR270890 Cardamine hirsuta HOM05D005890 ORTHO05D006717 2.4e-15 87.0 78 59.0
BcaB08g36002 Brassica carinata HOM05D005890 ORTHO05D006717 3.1e-15 86.7 81 58.0
Lsat_1_v5_gn_7_55781 Lactuca sativa HOM05D005890 ORTHO05D006717 3.1e-15 86.7 56 69.6
TAR637G0001 Trochodendron aralioides HOM05D005890 ORTHO05D006717 4.0e-15 86.3 53 71.7
BcaC03g14182 Brassica carinata HOM05D005890 ORTHO05D006717 5.3e-15 85.9 76 57.9
C02p14590 Brassica napus HOM05D005890 ORTHO05D006717 5.3e-15 85.9 76 57.9
BolC2t07586H Brassica oleracea HOM05D005890 ORTHO05D006717 5.3e-15 85.9 76 57.9
Phvul.003G140452 Phaseolus vulgaris HOM05D005890 ORTHO05D006717 5.3e-15 85.9 247 33.6
BcaC04g20011 Brassica carinata HOM05D005890 ORTHO05D006717 9.0e-15 85.1 81 55.6
C09p48820 Brassica napus HOM05D005890 ORTHO05D006717 9.0e-15 85.1 81 55.6
BolC9t57729H Brassica oleracea HOM05D005890 ORTHO05D006717 9.0e-15 85.1 81 55.6
ECA234G0353 Erigeron canadensis HOM05D005890 ORTHO05D006717 9.0e-15 85.1 104 46.2
MSTRG.26556 Avicennia marina HOM05D005890 ORTHO05D006717 2.0e-14 84.0 220 34.1
A02p08710 Brassica napus HOM05D005890 ORTHO05D006717 2.0e-14 84.0 88 54.5
BraA02t05941Z Brassica rapa HOM05D005890 ORTHO05D006717 2.0e-14 84.0 88 54.5
TPR.G5393 Trifolium pratense HOM05D005890 ORTHO05D006717 2.0e-14 84.0 113 46.9
Lsat_1_v5_gn_5_83860 Lactuca sativa HOM05D005890 ORTHO05D006717 2.6e-14 83.6 76 53.9
BcaB05g22318 Brassica carinata HOM05D005890 ORTHO05D006717 4.4e-14 82.8 81 56.8
CDE02G0471 Ceratophyllum demersum HOM05D005890 ORTHO05D006717 4.4e-14 82.8 124 41.1
CDE05G3513 Ceratophyllum demersum HOM05D005890 ORTHO05D006717 7.6e-14 82.0 107 42.1
Migut.L01872 Erythranthe guttata HOM05D005890 ORTHO05D006717 9.9e-14 81.6 199 35.2
SGA_v2.0_scaffold392G50652 Striga asiatica HOM05D005890 ORTHO05D006717 1.7e-13 80.9 217 35.0
Zm00001eb136110 Zea mays HOM05D005890 ORTHO05D006717 1.7e-13 80.9 213 35.2
MBI18_g10586_MAGBIO Magnolia biondii HOM05D005890 ORTHO05D006717 1.1e-12 78.2 185 39.5
SEGI_20539 Sequoiadendron giganteum HOM05D005890 ORTHO05D006717 1.4e-12 77.8 121 40.5
Pp3c3_34440 Physcomitrium patens HOM05D005890 ORTHO05D006717 5.4e-12 75.9 121 43.0
Pp3c3_34441 Physcomitrium patens HOM05D005890 ORTHO05D006717 5.4e-12 75.9 121 43.0
Mapoly0009s0141 Marchantia polymorpha HOM05D005890 ORTHO05D006717 2.1e-11 73.9 100 40.0
SMO337G0105 Selaginella moellendorffii HOM05D004944 ORTHO05D005989 2.1e-11 73.9 113 39.8
HPP92_018699 Vanilla planifolia HOM05D005890 ORTHO05D006717 3.5e-11 73.2 207 32.4
MBI14_g15782_MAGBIO Magnolia biondii HOM05D005890 ORTHO05D006717 3.0e-10 70.1 209 33.5
SGA_v2.0_scaffold41G15805 Striga asiatica HOM05D005890 ORTHO05D006717 1.6e-08 64.3 254 31.9
Zm00001eb172010 Zea mays HOM05D005890 ORTHO05D006717 4.8e-08 62.8 124 37.9
DCAR_029041 Daucus carota HOM05D005890 ORTHO05D006717 1.4e-07 61.2 217 30.9
Gohir.D04G007200 Gossypium hirsutum HOM05D005890 ORTHO05D006717 4.0e-07 59.7 57 52.6
AT5G57120 Arabidopsis thaliana HOM05D005890 ORTHO05D006717 6.9e-07 58.9 67 47.8
FvH4_4g06950 Fragaria vesca HOM05D005890 ORTHO05D006717 6.9e-07 58.9 202 30.7
CBR_g20282 Chara braunii HOM05D000019 ORTHO05D000002 1.5e-06 57.8 60 50.0
SEGI_22268 Sequoiadendron giganteum HOM05D005890 ORTHO05D006717 7.6e-06 55.5 28 82.1
AL8G33040 Arabidopsis lyrata HOM05D005890 ORTHO05D006717 9.9e-06 55.1 67 46.3


User provided reference genes

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