Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_22034 Corylus avellana HOM05D007474 ORTHO05D009367 9.5e-142 506.9 271 100.0
Haze_22037 Corylus avellana HOM05D007474 ORTHO05D009367 9.5e-142 506.9 271 100.0
Cfa013460 Carpinus fangiana HOM05D007474 ORTHO05D009367 6.4e-122 441.0 257 92.6
CiPaw.07G198000 Carya illinoinensis HOM05D007474 ORTHO05D009367 8.2e-101 370.9 251 80.1
Manes.02G078300 Manihot esculenta HOM05D007474 ORTHO05D009367 1.9e-89 333.2 249 71.5
Dinv41187 Davidia involucrata HOM05D007474 ORTHO05D009367 1.0e-87 327.4 243 70.0
Ciclev10010167m.g Citrus clementina HOM05D007474 ORTHO05D009367 6.7e-87 324.7 251 70.5
RcHm_v2.0_Chr4g0399191 Rosa chinensis HOM05D007474 ORTHO05D009367 5.3e-84 315.1 243 69.5
GSVIVG01029310001 Vitis vinifera HOM05D007474 ORTHO05D009367 5.3e-84 315.1 243 67.9
Prupe.1G073900 Prunus persica HOM05D007474 ORTHO05D009367 7.0e-84 314.7 249 69.5
Atru.chr7.945_Atru.chr7.946 Acer truncatum HOM05D007474 ORTHO05D009367 1.5e-83 313.5 250 67.6
TAR625G0702 Trochodendron aralioides HOM05D007474 ORTHO05D009367 2.9e-82 309.3 243 67.9
QL04p010614 Quercus lobata HOM05D007474 ORTHO05D009367 4.2e-81 305.4 255 68.6
Thecc.09G187600 Theobroma cacao HOM05D007474 ORTHO05D009367 4.7e-80 302.0 249 67.5
FAN17G0817 Fragaria x ananassa HOM05D007474 ORTHO05D009367 1.8e-79 300.1 242 65.7
FvH4_4g07070 Fragaria vesca HOM05D007474 ORTHO05D009367 2.0e-78 296.6 243 65.8
Actinidia02497 Actinidia chinensis HOM05D007474 ORTHO05D009367 9.7e-78 294.3 243 63.8
Duzib170G0522 Durio zibethinus HOM05D007474 ORTHO05D009367 4.8e-77 292.0 243 67.5
FAN07G0784 Fragaria x ananassa HOM05D007474 ORTHO05D009367 2.4e-76 289.7 250 64.8
Nn8g40674 Nelumbo nucifera HOM05D007474 ORTHO05D009367 2.4e-76 289.7 249 61.8
FAN22G0500 Fragaria x ananassa HOM05D007474 ORTHO05D009367 5.3e-76 288.5 245 64.1
THA.LOC104813505 Tarenaya hassleriana HOM05D007474 ORTHO05D009367 5.3e-76 288.5 243 63.4
Rhsim01G0114800 Rhododendron simsii HOM05D007474 ORTHO05D009367 2.0e-75 286.6 245 62.9
Rhsim01G0114300 Rhododendron simsii HOM05D007474 ORTHO05D009367 4.5e-75 285.4 245 62.4
Carub.0007s1493 Capsella rubella HOM05D007474 ORTHO05D009367 7.7e-75 284.6 243 63.8
Thhalv10027087m.g Eutrema salsugineum HOM05D007474 ORTHO05D009367 1.7e-74 283.5 243 63.8
AT4G26020 Arabidopsis thaliana HOM05D007474 ORTHO05D009367 5.0e-74 282.0 243 63.8
FAN12G4033 Fragaria x ananassa HOM05D007474 ORTHO05D009367 8.5e-74 281.2 248 63.7
TPR.G7578 Trifolium pratense HOM05D007474 ORTHO05D009367 8.5e-74 281.2 243 60.9
Gohir.A02G011900 Gossypium hirsutum HOM05D007474 ORTHO05D009367 1.6e-72 276.9 248 64.5
MD16G1247400 Malus domestica HOM05D007474 ORTHO05D009367 1.6e-72 276.9 223 66.8
Phvul.009G235500 Phaseolus vulgaris HOM05D007474 ORTHO05D009367 1.6e-72 276.9 249 60.6
A03p56400 Brassica napus HOM05D007474 ORTHO05D009367 3.6e-72 275.8 243 60.9
CARHR233540 Cardamine hirsuta HOM05D007474 ORTHO05D009367 4.7e-72 275.4 243 62.6
Lj6g0008723 Lotus japonicus HOM05D007474 ORTHO05D009367 4.7e-72 275.4 249 59.0
Lalb_Chr23g0276761 Lupinus albus HOM05D007474 ORTHO05D009367 6.1e-72 275.0 243 60.1
Sp7g24050 Schrenkiella parvula HOM05D007474 ORTHO05D009367 6.1e-72 275.0 243 62.1
Psat1g143800 Pisum sativum HOM05D007474 ORTHO05D009367 8.0e-72 274.6 249 59.8
Cpa.g.sc95.3 Carica papaya HOM05D007474 ORTHO05D009367 1.4e-71 273.9 249 60.6
AL7G26960 Arabidopsis lyrata HOM05D007474 ORTHO05D009367 4.0e-71 272.3 243 63.0
C07p54630 Brassica napus HOM05D007474 ORTHO05D009367 6.7e-71 271.6 243 60.5
Medtr2g038090 Medicago truncatula HOM05D007474 ORTHO05D009367 1.5e-70 270.4 243 59.7
PSO063G0774 Papaver somniferum HOM05D007474 ORTHO05D009367 1.5e-70 270.4 246 61.0
Lsat_1_v5_gn_7_55841 Lactuca sativa HOM05D007474 ORTHO05D009367 4.4e-70 268.9 245 60.4
TWI63G0256 Tripterygium wilfordii HOM05D007474 ORTHO05D009367 6.3e-69 265.0 249 58.2
Cc06_g17460 Coffea canephora HOM05D007474 ORTHO05D009367 8.2e-69 264.6 253 58.1
Aqoxy7G02873 Aquilegia oxysepala HOM05D007474 ORTHO05D009367 1.1e-68 264.2 268 56.0
Glyma.09G060400 Glycine max HOM05D007474 ORTHO05D009367 1.8e-68 263.5 243 60.1
VMungo1309G2929 Vigna mungo HOM05D007474 ORTHO05D009367 1.8e-68 263.5 249 59.0
CANSAT56G2223 Cannabis sativa HOM05D007474 ORTHO05D009367 2.4e-68 263.1 248 58.9
HanXRQChr03g0065461 Helianthus annuus HOM05D007474 ORTHO05D009367 1.2e-67 260.8 243 59.3
BolC7t45951H Brassica oleracea HOM05D007474 ORTHO05D009367 1.6e-67 260.4 261 56.3
Gohir.D02G012700 Gossypium hirsutum HOM05D007474 ORTHO05D009367 5.9e-67 258.5 243 62.6
Aa31LG3G380 Aethionema arabicum HOM05D007474 ORTHO05D009367 1.0e-66 257.7 249 58.6
Hma1.2p1_0235F.1_g098730 Hydrangea macrophylla HOM05D007474 ORTHO05D009367 1.3e-66 257.3 214 62.6
Peaxi162Scf00231g01013 Petunia axillaris HOM05D007474 ORTHO05D009367 2.2e-66 256.5 243 57.6
Sabra18G0115300 Salix brachista HOM05D007474 ORTHO05D009367 3.8e-66 255.8 187 70.1
Gorai.005G016200 Gossypium raimondii HOM05D007474 ORTHO05D009367 8.5e-66 254.6 249 61.4
PSO170G3200 Papaver somniferum HOM05D007474 ORTHO05D009367 1.1e-65 254.2 296 51.4
arahy.Tifrunner.gnm1.ann1.0S7KVV Arachis hypogaea HOM05D007474 ORTHO05D009367 5.5e-65 251.9 227 58.1
ECA240G4744 Erigeron canadensis HOM05D007474 ORTHO05D009367 1.4e-63 247.3 237 55.7
Nitab4.5_0011174g0010 Nicotiana tabacum HOM05D007474 ORTHO05D009367 1.8e-63 246.9 243 55.6
arahy.Tifrunner.gnm1.ann1.FGVY1L Arachis hypogaea HOM05D007474 ORTHO05D009367 2.3e-63 246.5 227 57.3
BcaC06g32774 Brassica carinata HOM05D007474 ORTHO05D009367 4.1e-60 235.7 243 56.0
PGR142G1289 Punica granatum HOM05D007474 ORTHO05D009367 5.4e-60 235.3 250 54.8
CAN.G107.39 Capsicum annuum HOM05D007474 ORTHO05D009367 9.1e-60 234.6 239 53.1
MBI16_g28190_MAGBIO Magnolia biondii HOM05D007474 ORTHO05D009367 4.7e-56 222.2 202 58.9
BraA03t14710Z Brassica rapa HOM05D007474 ORTHO05D009367 6.8e-55 218.4 258 49.6
Sc11g0007970 Simmondsia chinensis HOM05D007474 ORTHO05D009367 8.9e-55 218.0 243 51.9
PGR142G0563 Punica granatum HOM05D007474 ORTHO05D009367 1.7e-53 213.8 254 53.5
COL.COLO4_06926 Corchorus olitorius HOM05D007474 ORTHO05D009367 3.5e-51 206.1 199 60.3
DCAR_014675 Daucus carota HOM05D005719 ORTHO05D007030 4.5e-51 205.7 225 50.2
Oeu044666.1 Olea europaea HOM05D007474 ORTHO05D009367 4.3e-49 199.1 198 56.1
Zm00001eb232320 Zea mays HOM05D007474 ORTHO05D009367 4.3e-49 199.1 246 44.7
Nitab4.5_0000056g0090 Nicotiana tabacum HOM05D007474 ORTHO05D009367 5.6e-49 198.7 270 45.9
AUR62012086 Chenopodium quinoa HOM05D007474 ORTHO05D009367 3.6e-48 196.1 243 46.1
EL10Ac2g04755 Beta vulgaris HOM05D007474 ORTHO05D009367 8.9e-47 191.4 243 46.1
Os02g0148600 Oryza sativa ssp. japonica HOM05D007474 ORTHO05D009367 2.0e-46 190.3 246 43.9
AUR62039378 Chenopodium quinoa HOM05D007474 ORTHO05D009367 7.5e-46 188.3 243 46.1
Potri.018G141166 Populus trichocarpa HOM05D007474 ORTHO05D009367 1.5e-41 174.1 125 74.4
AUR62039384 Chenopodium quinoa HOM05D007474 ORTHO05D009367 5.6e-41 172.2 235 43.8
Potri.018G141232 Populus trichocarpa HOM05D007474 ORTHO05D009367 5.6e-41 172.2 126 68.3
Ah.09g225720 Amaranthus hybridus HOM05D007474 ORTHO05D009367 1.1e-39 167.9 249 42.2
Eucgr.C00103 Eucalyptus grandis HOM05D007474 ORTHO05D009367 1.8e-39 167.2 151 58.9
CSS0031812 Camellia sinensis var. sinensis HOM05D007474 ORTHO05D009367 4.9e-37 159.1 157 54.1
vmacro20808 Vaccinium macrocarpon HOM05D007474 ORTHO05D009367 1.5e-33 147.5 139 56.1
Hma1.2p1_0140F.1_g063730 Hydrangea macrophylla HOM05D007474 ORTHO05D009367 2.5e-33 146.7 118 65.3
Ca_02115_v3 Cicer arietinum L. HOM05D007474 ORTHO05D009367 3.4e-30 136.3 126 54.8
PGR142G3816 Punica granatum HOM05D007474 ORTHO05D009367 2.4e-28 130.2 113 63.7
Hund13756 Selenicereus undatus HOM05D007474 ORTHO05D009367 1.4e-23 114.4 132 47.7
QL04p011351 Quercus lobata HOM05D000009 ORTHO05D000008 7.6e-22 108.6 105 59.0
Lj4A313T24 Lonicera japonica HOM05D007474 ORTHO05D009367 9.2e-20 101.7 86 69.8
Actinidia07550 Actinidia chinensis HOM05D007474 ORTHO05D009367 2.1e-19 100.5 78 61.5
AUR62004543 Chenopodium quinoa HOM05D007474 ORTHO05D009367 7.8e-19 98.6 168 38.1
SMO364G0168 Selaginella moellendorffii HOM05D007474 ORTHO05D009367 1.2e-16 91.3 248 28.2
TWI63G1298 Tripterygium wilfordii HOM05D007474 ORTHO05D009367 5.3e-15 85.9 105 46.7
Lju170C0T1 Lonicera japonica HOM05D007424 ORTHO05D009367 7.6e-14 82.0 98 53.1
arahy.Tifrunner.gnm1.ann1.245C1J Arachis hypogaea HOM05D007474 ORTHO05D009367 3.8e-13 79.7 65 58.5
arahy.Tifrunner.gnm1.ann1.TVY351 Arachis hypogaea HOM05D007474 ORTHO05D009367 8.4e-13 78.6 61 62.3
Mapoly0011s0196 Marchantia polymorpha HOM05D007474 ORTHO05D009367 8.4e-13 78.6 259 26.6
vmacro20809 Vaccinium macrocarpon HOM05D007474 ORTHO05D009367 1.4e-12 77.8 55 69.1
Actinidia07549 Actinidia chinensis HOM05D007474 ORTHO05D009367 4.3e-09 66.2 47 68.1
Eucgr.C00104 Eucalyptus grandis HOM05D007474 ORTHO05D009367 2.1e-08 63.9 57 57.9
arahy.Tifrunner.gnm1.ann1.J5XFRX Arachis hypogaea HOM05D011742 ORTHO05D014450 4.0e-07 59.7 55 56.4
MBI16_g42994_MAGBIO Magnolia biondii HOM05D007474 ORTHO05D009367 4.0e-07 59.7 134 32.1


User provided reference genes

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