Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_22010 Corylus avellana HOM05D006321 ORTHO05D007929 2.2e-75 285.4 131 100.0
QL02p047686 Quercus lobata HOM05D006321 ORTHO05D007929 6.6e-64 247.3 152 77.6
CiPaw.08G033200 Carya illinoinensis HOM05D006321 ORTHO05D007929 1.9e-63 245.7 152 77.6
Dinv25432 Davidia involucrata HOM05D006321 ORTHO05D007929 5.6e-63 244.2 152 76.3
CSS0046955 Camellia sinensis var. sinensis HOM05D006321 ORTHO05D007929 2.1e-62 242.3 152 75.7
Prupe.1G076700 Prunus persica HOM05D006321 ORTHO05D007929 8.1e-62 240.4 152 75.0
TAR622G0244 Trochodendron aralioides HOM05D006321 ORTHO05D007929 8.1e-62 240.4 152 75.0
VMungo0540G0928 Vigna mungo HOM05D006321 ORTHO05D007929 1.8e-61 239.2 152 75.0
Atru.chr7.791 Acer truncatum HOM05D006321 ORTHO05D007929 2.3e-61 238.8 152 74.3
CSS0019729 Camellia sinensis var. sinensis HOM05D006321 ORTHO05D007929 2.3e-61 238.8 152 75.0
Thecc.09G184700 Theobroma cacao HOM05D006321 ORTHO05D007929 2.3e-61 238.8 152 75.0
Glyma.01G110600 Glycine max HOM05D006321 ORTHO05D007929 3.1e-61 238.4 152 75.0
Duzib251G0486 Durio zibethinus HOM05D006321 ORTHO05D007929 4.0e-61 238.0 153 74.5
CSS0021189 Camellia sinensis var. sinensis HOM05D006321 ORTHO05D007929 8.9e-61 236.9 152 74.3
PGR142G1933 Punica granatum HOM05D006321 ORTHO05D007929 8.9e-61 236.9 151 73.5
Potri.018G143500 Populus trichocarpa HOM05D006321 ORTHO05D007929 1.2e-60 236.5 152 75.0
Phvul.006G013600 Phaseolus vulgaris HOM05D006321 ORTHO05D007929 1.5e-60 236.1 152 75.0
Manes.02G106300 Manihot esculenta HOM05D006321 ORTHO05D007929 2.6e-60 235.3 151 75.5
COL.COLO4_27457 Corchorus olitorius HOM05D006321 ORTHO05D007929 3.4e-60 235.0 152 74.3
GSVIVG01010872001 Vitis vinifera HOM05D006321 ORTHO05D007929 4.4e-60 234.6 152 75.0
Sed0024765 Sechium edule HOM05D006321 ORTHO05D007929 7.5e-60 233.8 152 71.7
Sc03g0007150 Simmondsia chinensis HOM05D006321 ORTHO05D007929 1.3e-59 233.0 152 73.0
Phvul.003G138800 Phaseolus vulgaris HOM05D006321 ORTHO05D007929 1.7e-59 232.6 152 73.7
Phvul.003G139178 Phaseolus vulgaris HOM05D006321 ORTHO05D007929 1.7e-59 232.6 152 73.7
RcHm_v2.0_Chr4g0399821 Rosa chinensis HOM05D006321 ORTHO05D007929 2.2e-59 232.3 152 73.7
Glyma.03G076300 Glycine max HOM05D006321 ORTHO05D007929 2.9e-59 231.9 152 73.0
Aqoxy3G01064 Aquilegia oxysepala HOM05D006321 ORTHO05D007929 3.7e-59 231.5 152 71.1
Rhsim01G0118600 Rhododendron simsii HOM05D006321 ORTHO05D007929 3.7e-59 231.5 152 71.7
Gohir.A06G171500 Gossypium hirsutum HOM05D006321 ORTHO05D007929 8.3e-59 230.3 150 73.3
Gorai.010G210200 Gossypium raimondii HOM05D006321 ORTHO05D007929 8.3e-59 230.3 150 73.3
MBI17_g07973_MAGBIO Magnolia biondii HOM05D006321 ORTHO05D007929 8.3e-59 230.3 152 71.1
MD16G1249800 Malus domestica HOM05D006321 ORTHO05D007929 1.1e-58 229.9 139 79.9
Potri.006G076300 Populus trichocarpa HOM05D006321 ORTHO05D007929 1.1e-58 229.9 152 73.0
arahy.Tifrunner.gnm1.ann1.CI6UTV Arachis hypogaea HOM05D006321 ORTHO05D007929 1.4e-58 229.6 150 72.0
Lalb_Chr04g0263391 Lupinus albus HOM05D006321 ORTHO05D007929 2.4e-58 228.8 150 72.7
MELO3C012967.2 Cucumis melo HOM05D006321 ORTHO05D007929 3.2e-58 228.4 152 70.4
Gohir.D06G179600 Gossypium hirsutum HOM05D006321 ORTHO05D007929 3.2e-58 228.4 150 72.7
Ciclev10008911m.g Citrus clementina HOM05D006321 ORTHO05D007929 4.1e-58 228.0 151 72.2
CANSAT11G0316 Cannabis sativa HOM05D006321 ORTHO05D007929 5.4e-58 227.6 153 69.9
CsaV3_3G025050 Cucumis sativus L. HOM05D006321 ORTHO05D007929 5.4e-58 227.6 152 70.4
THA.LOC104817778 Tarenaya hassleriana HOM05D006321 ORTHO05D007929 7.1e-58 227.3 153 70.6
A10p14640 Brassica napus HOM05D006321 ORTHO05D007929 1.6e-57 226.1 151 70.2
BraA10t43551Z Brassica rapa HOM05D006321 ORTHO05D007929 1.6e-57 226.1 151 70.2
Nn2g12444 Nelumbo nucifera HOM05D006321 ORTHO05D007929 3.5e-57 224.9 114 87.7
Eucgr.C00122 Eucalyptus grandis HOM05D006321 ORTHO05D007929 4.6e-57 224.6 152 68.4
FvH4_4g07380 Fragaria vesca HOM05D006321 ORTHO05D007929 4.6e-57 224.6 148 73.0
FAN07G2214 Fragaria x ananassa HOM05D006321 ORTHO05D007929 4.6e-57 224.6 148 73.0
FAN12G2844 Fragaria x ananassa HOM05D006321 ORTHO05D007929 4.6e-57 224.6 148 73.0
FAN22G1279 Fragaria x ananassa HOM05D006321 ORTHO05D007929 4.6e-57 224.6 148 73.0
Medtr3g465100 Medicago truncatula HOM05D006321 ORTHO05D007929 4.6e-57 224.6 152 71.1
arahy.Tifrunner.gnm1.ann1.N3I1N2 Arachis hypogaea HOM05D006321 ORTHO05D007929 1.0e-56 223.4 143 73.4
EL10Ac5g11827 Beta vulgaris HOM05D006321 ORTHO05D007929 1.0e-56 223.4 152 69.7
Ca_14974_v3 Cicer arietinum L. HOM05D006321 ORTHO05D007929 1.0e-56 223.4 152 71.1
COL.COLO4_07534 Corchorus olitorius HOM05D006321 ORTHO05D007929 1.0e-56 223.4 142 75.4
Nitab4.5_0002365g0010 Nicotiana tabacum HOM05D006321 ORTHO05D007929 1.0e-56 223.4 152 68.4
BcaC04g19986 Brassica carinata HOM05D006321 ORTHO05D007929 1.3e-56 223.0 151 69.5
Thhalv10014893m.g Eutrema salsugineum HOM05D006321 ORTHO05D007929 1.3e-56 223.0 151 69.5
Lj6g0010246 Lotus japonicus HOM05D006321 ORTHO05D007929 1.3e-56 223.0 152 71.7
AUR62030699 Chenopodium quinoa HOM05D006321 ORTHO05D007929 2.3e-56 222.2 152 67.1
Psat2g182520 Pisum sativum HOM05D006321 ORTHO05D004512 3.9e-56 221.5 152 69.1
Psat4g027120 Pisum sativum HOM05D006321 ORTHO05D007929 3.9e-56 221.5 152 69.1
AL8G33200 Arabidopsis lyrata HOM05D006321 ORTHO05D007929 5.1e-56 221.1 151 68.2
Carub.0008s1773 Capsella rubella HOM05D006321 ORTHO05D007929 5.1e-56 221.1 151 68.2
CAN.G279.32 Capsicum annuum HOM05D006321 ORTHO05D007929 5.1e-56 221.1 152 67.8
AUR62030694 Chenopodium quinoa HOM05D006321 ORTHO05D007929 5.1e-56 221.1 152 66.4
Cc06_g21570 Coffea canephora HOM05D006321 ORTHO05D007929 5.1e-56 221.1 152 69.1
Nitab4.5_0000366g0180 Nicotiana tabacum HOM05D006321 ORTHO05D007929 5.1e-56 221.1 152 68.4
Sp6g18970 Schrenkiella parvula HOM05D006321 ORTHO05D007929 5.1e-56 221.1 151 68.9
TWI60G1509 Tripterygium wilfordii HOM05D006321 ORTHO05D007929 5.1e-56 221.1 152 69.7
BcaB08g36085 Brassica carinata HOM05D006321 ORTHO05D007929 1.1e-55 219.9 151 68.9
CAN.G547.21 Capsicum annuum HOM05D006321 ORTHO05D007929 1.5e-55 219.5 152 67.1
PSO339G6079 Papaver somniferum HOM05D006321 ORTHO05D007929 1.5e-55 219.5 153 68.0
AT5G57230 Arabidopsis thaliana HOM05D006321 ORTHO05D007929 1.9e-55 219.2 151 67.5
MD13G1243200 Malus domestica HOM05D006321 ORTHO05D007929 1.9e-55 219.2 114 87.7
Solyc07g008910.3 Solanum lycopersicum HOM05D006321 ORTHO05D007929 2.5e-55 218.8 152 67.1
Aa31LG3G13120 Aethionema arabicum HOM05D006321 ORTHO05D007929 3.3e-55 218.4 151 68.2
PGSC0003DMG400028738 Solanum tuberosum HOM05D006321 ORTHO05D007929 3.3e-55 218.4 152 66.4
CARHR271020 Cardamine hirsuta HOM05D006321 ORTHO05D007929 4.3e-55 218.0 151 66.9
HanXRQChr16g0529271 Helianthus annuus HOM05D006321 ORTHO05D007929 7.3e-55 217.2 152 65.8
TPR.G32885 Trifolium pratense HOM05D006321 ORTHO05D007929 7.3e-55 217.2 152 69.1
Lsat_1_v5_gn_7_55681 Lactuca sativa HOM05D006321 ORTHO05D007929 1.6e-54 216.1 151 67.5
ECA240G2363 Erigeron canadensis HOM05D006321 ORTHO05D007929 2.8e-54 215.3 152 65.8
HPP92_002000 Vanilla planifolia HOM05D006321 ORTHO05D007929 2.8e-54 215.3 152 66.4
C09p49090 Brassica napus HOM05D006321 ORTHO05D007929 3.6e-54 214.9 159 66.0
BolC9t57758H Brassica oleracea HOM05D006321 ORTHO05D007929 3.6e-54 214.9 159 66.0
PSO384G3851 Papaver somniferum HOM05D006321 ORTHO05D007929 4.7e-54 214.5 153 66.0
Hund14984 Selenicereus undatus HOM05D006321 ORTHO05D007929 6.2e-54 214.2 114 82.5
MSTRG.10445 Avicennia marina HOM05D006321 ORTHO05D007929 1.8e-53 212.6 152 67.8
ECA234G0872 Erigeron canadensis HOM05D006321 ORTHO05D007929 3.1e-53 211.8 152 65.8
Os06g0482200 Oryza sativa ssp. japonica HOM05D006321 ORTHO05D007929 6.8e-53 210.7 152 63.8
vmacro20823 Vaccinium macrocarpon HOM05D006321 ORTHO05D007929 1.5e-52 209.5 114 81.6
Ah.12g059430 Amaranthus hybridus HOM05D006321 ORTHO05D007929 3.4e-52 208.4 153 64.1
Os10g0162834 Oryza sativa ssp. japonica HOM05D006321 ORTHO05D007929 3.4e-52 208.4 152 63.2
HanXRQChr03g0068421 Helianthus annuus HOM05D006321 ORTHO05D007929 1.7e-51 206.1 143 66.4
Oeu044678.1 Olea europaea HOM05D006321 ORTHO05D007929 4.9e-51 204.5 114 79.8
AUR62036340 Chenopodium quinoa HOM05D006321 ORTHO05D007929 1.1e-50 203.4 114 77.2
Migut.L01889 Erythranthe guttata HOM05D006321 ORTHO05D007929 1.1e-50 203.4 152 65.1
Oeu030095.1 Olea europaea HOM05D006321 ORTHO05D007929 4.1e-50 201.4 114 80.7
SEGI_34333 Sequoiadendron giganteum HOM05D006321 ORTHO05D007929 9.2e-50 200.3 153 60.1
Sabra18G0117000 Salix brachista HOM05D003168 ORTHO05D003525 1.2e-49 199.9 102 88.2
Zm00001eb161640 Zea mays HOM05D006321 ORTHO05D007929 1.6e-49 199.5 143 63.6
CDE06G2300 Ceratophyllum demersum HOM05D006321 ORTHO05D007929 2.7e-49 198.7 133 69.9
Sopen07g004840 Solanum pennellii HOM05D003168 ORTHO05D003590 2.7e-49 198.7 114 75.4
PSO541G2755 Papaver somniferum HOM05D006321 ORTHO05D007929 6.0e-49 197.6 114 77.2
SGA_v2.0_scaffold21G09650 Striga asiatica HOM05D006321 ORTHO05D007929 1.0e-48 196.8 152 62.5
Actinidia01283 Actinidia chinensis HOM05D006321 ORTHO05D007929 2.3e-48 195.7 152 65.8
Cpa.g.sc95.16 Carica papaya HOM05D006321 ORTHO05D007929 7.3e-47 190.7 152 63.2
unitig_736.g22252 Utricularia gibba HOM05D006321 ORTHO05D007929 2.8e-46 188.7 134 67.2
Lj6A87G16 Lonicera japonica HOM05D006321 ORTHO05D007929 3.6e-46 188.3 95 88.4
Psat5g235880 Pisum sativum HOM05D006321 ORTHO05D007929 4.7e-46 188.0 93 88.2
ATR1152G025 Amborella trichopoda HOM05D006321 ORTHO05D007929 6.8e-45 184.1 99 79.8
Mapoly0003s0233 Marchantia polymorpha HOM05D006321 ORTHO05D007929 5.8e-44 181.0 140 59.3
Migut.G01073 Erythranthe guttata HOM05D006321 ORTHO05D007929 2.9e-43 178.7 99 81.8
Sabra06G0057200 Salix brachista HOM05D006321 ORTHO05D007929 2.9e-43 178.7 162 56.8
Pp3c22_13020 Physcomitrium patens HOM05D006321 ORTHO05D007929 8.4e-43 177.2 145 55.2
DCAR_005801 Daucus carota HOM05D006321 ORTHO05D007929 4.6e-41 171.4 102 71.6
Mapoly0003s0169 Marchantia polymorpha HOM05D006321 ORTHO05D007929 3.0e-40 168.7 140 56.4
FAN17G2672 Fragaria x ananassa HOM05D006321 ORTHO05D007929 1.4e-37 159.8 128 65.6
COL.COLO4_32845 Corchorus olitorius HOM05D006321 ORTHO05D007929 5.8e-36 154.5 85 82.4
Dinv41168 Davidia involucrata HOM05D000015 ORTHO05D003525 9.9e-36 153.7 86 81.4
TAR629G2308 Trochodendron aralioides HOM05D006321 ORTHO05D007929 6.4e-35 151.0 85 81.2
CBR_g19745 Chara braunii HOM05D006321 ORTHO05D007929 7.4e-31 137.5 132 53.0
Peaxi162Scf00324g00017 Petunia axillaris HOM05D006321 ORTHO05D007929 1.3e-30 136.7 96 67.7
Lj6A100T20 Lonicera japonica HOM05D006321 ORTHO05D007929 6.9e-29 131.0 67 88.1
Aqoxy108s003 Aquilegia oxysepala HOM05D006321 ORTHO05D007929 5.8e-28 127.9 129 51.9
BcaB05g22329 Brassica carinata HOM05D006321 ORTHO05D007929 9.9e-28 127.1 114 57.9
Sopen00g012850 Solanum pennellii HOM05D006321 ORTHO05D007929 2.7e-09 65.9 31 83.9


User provided reference genes

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