Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_21888 Corylus avellana HOM05D006532 ORTHO05D008570 1.2e-127 459.9 239 100.0
Cfa013365 Carpinus fangiana HOM05D006532 ORTHO05D008570 3.6e-116 421.8 261 85.8
CiPaw.07G204300 Carya illinoinensis HOM05D006532 ORTHO05D008570 3.7e-97 358.6 261 75.1
QL12p041387 Quercus lobata HOM05D006532 ORTHO05D008570 2.2e-89 332.8 263 71.1
Prupe.1G448300 Prunus persica HOM05D006532 ORTHO05D008570 1.4e-83 313.5 261 66.7
Cpa.g.c24654.2 Carica papaya HOM05D006532 ORTHO05D008570 2.3e-83 312.8 266 66.9
RcHm_v2.0_Chr6g0306211 Rosa chinensis HOM05D006532 ORTHO05D008570 4.0e-83 312.0 261 67.4
Ciclev10008913m.g Citrus clementina HOM05D006532 ORTHO05D008570 5.7e-82 308.1 262 67.9
Thecc.09G045200 Theobroma cacao HOM05D006532 ORTHO05D008570 4.9e-81 305.1 264 66.7
TAR383G0022 Trochodendron aralioides HOM05D006532 ORTHO05D008570 6.3e-81 304.7 258 66.3
FvH4_2g35600 Fragaria vesca HOM05D006532 ORTHO05D008570 1.1e-80 303.9 261 65.9
Duzib168G2121 Durio zibethinus HOM05D006532 ORTHO05D008570 1.4e-80 303.5 258 67.8
FAN27G1267 Fragaria x ananassa HOM05D006532 ORTHO05D008570 1.8e-80 303.1 261 65.5
CSS0019039 Camellia sinensis var. sinensis HOM05D006532 ORTHO05D008570 3.1e-80 302.4 261 65.1
FAN15G2034 Fragaria x ananassa HOM05D006532 ORTHO05D008570 4.1e-80 302.0 261 65.5
Atru.chr7.2089 Acer truncatum HOM05D006532 ORTHO05D008570 1.0e-78 297.4 262 64.9
Gohir.D05G048600 Gossypium hirsutum HOM05D006532 ORTHO05D008570 1.7e-78 296.6 265 66.0
Gorai.009G049900 Gossypium raimondii HOM05D006532 ORTHO05D008570 1.7e-78 296.6 265 66.0
GSVIVG01035625001 Vitis vinifera HOM05D006532 ORTHO05D008570 1.7e-78 296.6 261 65.1
MD08G1113700 Malus domestica HOM05D006532 ORTHO05D008570 2.5e-77 292.7 261 64.8
PGR031G1209 Punica granatum HOM05D006532 ORTHO05D008570 2.5e-77 292.7 265 64.5
Actinidia13336 Actinidia chinensis HOM05D006532 ORTHO05D008570 9.5e-77 290.8 262 62.2
Manes.16G075600 Manihot esculenta HOM05D006532 ORTHO05D008570 9.5e-77 290.8 256 65.6
MBI04_g45213_MAGBIO Magnolia biondii HOM05D006532 ORTHO05D008570 2.1e-76 289.7 260 64.2
THA.LOC104803760 Tarenaya hassleriana HOM05D006532 ORTHO05D008570 8.0e-76 287.7 268 62.3
Rhsim02G0178300 Rhododendron simsii HOM05D006532 ORTHO05D008570 1.0e-75 287.3 262 61.8
Potri.006G238400 Populus trichocarpa HOM05D006532 ORTHO05D008570 1.4e-75 287.0 261 62.5
Sabra06G0186500 Salix brachista HOM05D006532 ORTHO05D008570 6.8e-75 284.6 257 63.8
ClCG08G012230 Citrullus lanatus HOM05D006532 ORTHO05D008570 8.9e-75 284.3 258 64.0
Aqoxy7G03906 Aquilegia oxysepala HOM05D006532 ORTHO05D008570 9.8e-74 280.8 262 61.1
PSO210G1609 Papaver somniferum HOM05D006532 ORTHO05D008570 1.3e-73 280.4 257 60.7
COL.COLO4_20970 Corchorus olitorius HOM05D006532 ORTHO05D008570 6.4e-73 278.1 252 64.7
Dinv27901 Davidia involucrata HOM05D006532 ORTHO05D008570 6.4e-73 278.1 228 66.7
AL4G17550 Arabidopsis lyrata HOM05D006532 ORTHO05D008570 3.2e-72 275.8 266 59.8
ECA233G4786 Erigeron canadensis HOM05D006532 ORTHO05D008570 4.1e-72 275.4 259 60.6
Lsat_1_v5_gn_6_23160 Lactuca sativa HOM05D006532 ORTHO05D008570 4.1e-72 275.4 259 61.0
Sp4g05660 Schrenkiella parvula HOM05D006532 ORTHO05D008570 2.7e-71 272.7 266 59.8
Carub.0004s0565 Capsella rubella HOM05D006532 ORTHO05D008570 3.5e-71 272.3 267 59.6
Hma1.2p1_1753F.1_g300870 Hydrangea macrophylla HOM05D006532 ORTHO05D008570 3.5e-71 272.3 221 67.9
TWI63G1016 Tripterygium wilfordii HOM05D006532 ORTHO05D008570 6.0e-71 271.6 266 60.9
Thhalv10002038m.g Eutrema salsugineum HOM05D006532 ORTHO05D008570 7.8e-71 271.2 267 59.2
Solyc08g066640.3 Solanum lycopersicum HOM05D006532 ORTHO05D008570 1.0e-70 270.8 259 60.2
vmacro11058 Vaccinium macrocarpon HOM05D006532 ORTHO05D008570 1.7e-70 270.0 283 56.5
BolC4t27098H Brassica oleracea HOM05D006532 ORTHO05D008570 3.0e-70 269.2 257 60.3
MELO3C011141.2 Cucumis melo HOM05D006532 ORTHO05D008570 3.9e-70 268.9 257 60.7
HanXRQChr02g0050581 Helianthus annuus HOM05D006532 ORTHO05D008570 3.9e-70 268.9 260 59.2
Eucgr.C00591 Eucalyptus grandis HOM05D006532 ORTHO05D008570 5.0e-70 268.5 269 59.1
Aa31LG5G9920 Aethionema arabicum HOM05D006532 ORTHO05D008570 8.6e-70 267.7 281 57.7
C04p55710 Brassica napus HOM05D006532 ORTHO05D008570 1.1e-69 267.3 257 59.9
Lalb_Chr08g0243051 Lupinus albus HOM05D006532 ORTHO05D008570 1.1e-69 267.3 211 68.7
Phvul.009G109800 Phaseolus vulgaris HOM05D006532 ORTHO05D008570 1.1e-69 267.3 219 64.4
A04p20040 Brassica napus HOM05D006532 ORTHO05D008570 1.9e-69 266.5 258 59.7
Oeu038806.1 Olea europaea HOM05D006532 ORTHO05D008570 1.9e-69 266.5 259 58.7
Sopen08g020510 Solanum pennellii HOM05D006532 ORTHO05D008570 2.5e-69 266.2 260 60.0
CsaV3_2G030860 Cucumis sativus L. HOM05D006532 ORTHO05D008570 3.3e-69 265.8 257 59.5
Ca_15592_v3 Cicer arietinum L. HOM05D006532 ORTHO05D008570 7.3e-69 264.6 248 62.1
Nitab4.5_0003794g0050 Nicotiana tabacum HOM05D006532 ORTHO05D008570 7.3e-69 264.6 259 59.5
EL10Ac2g04018 Beta vulgaris HOM05D006532 ORTHO05D008570 9.5e-69 264.2 262 57.6
VMungo1309G2674 Vigna mungo HOM05D006532 ORTHO05D008570 2.1e-68 263.1 219 64.4
AT2G25830 Arabidopsis thaliana HOM05D006532 ORTHO05D008570 2.8e-68 262.7 270 58.9
AUR62009283 Chenopodium quinoa HOM05D006532 ORTHO05D008570 2.8e-68 262.7 266 59.4
PGSC0003DMG402002229 Solanum tuberosum HOM05D006532 ORTHO05D008570 2.8e-68 262.7 260 59.6
CDE02G1820 Ceratophyllum demersum HOM05D006532 ORTHO05D008570 8.0e-68 261.2 259 57.1
Glyma.06G085900 Glycine max HOM05D006532 ORTHO05D008570 2.3e-67 259.6 234 63.2
arahy.Tifrunner.gnm1.ann1.WYW67Z Arachis hypogaea HOM05D006532 ORTHO05D008570 5.2e-67 258.5 227 65.6
Cc08_g09550 Coffea canephora HOM05D006532 ORTHO05D008570 1.2e-66 257.3 261 57.9
Psat0s1928g0160 Pisum sativum HOM05D006532 ORTHO05D008570 3.4e-66 255.8 242 61.2
CAN.G400.2 Capsicum annuum HOM05D006532 ORTHO05D008570 4.4e-66 255.4 260 59.2
Migut.A00204 Erythranthe guttata HOM05D006532 ORTHO05D008570 5.8e-66 255.0 259 57.9
Sed0025155 Sechium edule HOM05D006532 ORTHO05D008570 5.8e-66 255.0 228 63.6
Lj1g0025870 Lotus japonicus HOM05D006532 ORTHO05D008570 9.8e-66 254.2 195 70.3
ATR0705G133 Amborella trichopoda HOM05D006532 ORTHO05D008570 3.7e-65 252.3 227 61.2
Peaxi162Scf00227g00717 Petunia axillaris HOM05D006532 ORTHO05D008570 3.7e-65 252.3 259 56.8
arahy.Tifrunner.gnm1.ann1.W7W61Q Arachis hypogaea HOM05D006532 ORTHO05D008570 4.9e-65 251.9 241 61.8
MSTRG.11698 Avicennia marina HOM05D006532 ORTHO05D008570 4.9e-65 251.9 265 56.2
CARHR115400 Cardamine hirsuta HOM05D006532 ORTHO05D008570 8.3e-65 251.1 246 58.5
Sc23g0005260 Simmondsia chinensis HOM05D006532 ORTHO05D008570 1.4e-64 250.4 265 57.7
Eucgr.C00548 Eucalyptus grandis HOM05D006532 ORTHO05D008570 1.9e-64 250.0 228 62.3
Glyma.04G084200 Glycine max HOM05D006532 ORTHO05D008570 1.9e-64 250.0 230 60.4
TPR.G15104 Trifolium pratense HOM05D006532 ORTHO05D008570 2.4e-64 249.6 236 58.9
TWI63G0186 Tripterygium wilfordii HOM05D006532 ORTHO05D008570 1.2e-63 247.3 265 57.4
Nn8g39129 Nelumbo nucifera HOM05D006532 ORTHO05D008570 2.7e-63 246.1 154 79.9
SalBow4G2374 Salvia bowleyana HOM05D006532 ORTHO05D008570 2.7e-63 246.1 265 56.2
SGA_v2.0_scaffold75G25009 Striga asiatica HOM05D006532 ORTHO05D008570 7.8e-63 244.6 262 55.7
Hma1.2p1_1138F.1_g260800 Hydrangea macrophylla HOM05D006532 ORTHO05D008570 1.3e-62 243.8 184 69.6
DCAR_004469 Daucus carota HOM05D006532 ORTHO05D008570 1.7e-62 243.4 222 58.6
Medtr3g109620 Medicago truncatula HOM05D006532 ORTHO05D008570 3.0e-62 242.7 278 54.7
Hund19514 Selenicereus undatus HOM05D006532 ORTHO05D008570 3.3e-61 239.2 292 53.1
AUR62039700 Chenopodium quinoa HOM05D006532 ORTHO05D008570 1.2e-60 237.3 235 58.7
Hund03396 Selenicereus undatus HOM05D006532 ORTHO05D008570 2.8e-60 236.1 195 66.2
CANSAT25G2817 Cannabis sativa HOM05D006532 ORTHO05D008570 2.3e-59 233.0 185 68.1
Lj8A581T27 Lonicera japonica HOM05D006532 ORTHO05D008570 5.2e-59 231.9 154 72.7
Ah.10g035030 Amaranthus hybridus HOM05D006532 ORTHO05D008570 6.8e-59 231.5 253 54.2
Zm00001eb293770 Zea mays HOM05D006532 ORTHO05D008570 6.8e-59 231.5 258 53.9
Nitab4.5_0001894g0020 Nicotiana tabacum HOM05D006532 ORTHO05D008570 9.2e-56 221.1 154 71.4
HPP92_022975 Vanilla planifolia HOM05D006532 ORTHO05D008570 1.2e-55 220.7 239 57.3
Os05g0519800 Oryza sativa ssp. japonica HOM05D006532 ORTHO05D008570 4.6e-55 218.8 267 49.8
FAN20G1106 Fragaria x ananassa HOM05D006532 ORTHO05D008570 7.3e-53 211.5 185 62.2
SEGI_00611 Sequoiadendron giganteum HOM05D006532 ORTHO05D008570 1.6e-52 210.3 154 64.9
unitig_748.g7511 Utricularia gibba HOM05D006532 ORTHO05D008570 1.4e-51 207.2 238 49.6
Mapoly0061s0140 Marchantia polymorpha HOM05D006532 ORTHO05D008570 9.9e-42 174.5 183 51.4
AagrBONN_evm.TU.Sc2ySwM_117.144 Anthoceros agrestis HOM05D006532 ORTHO05D008570 1.6e-39 167.2 189 49.7
Pp3c1_5570 Physcomitrium patens HOM05D006532 ORTHO05D008570 5.6e-37 158.7 243 42.4
SMO134G0241 Selaginella moellendorffii HOM05D006532 ORTHO05D008570 1.2e-34 151.0 181 47.0
SMO145G0084 Selaginella moellendorffii HOM05D006532 ORTHO05D008570 2.4e-32 143.3 183 44.3
Gohir.A05G046766 Gossypium hirsutum HOM05D006532 ORTHO05D008570 1.6e-31 140.6 166 56.0
CBR_g34330 Chara braunii HOM05D006532 ORTHO05D008570 6.0e-31 138.7 166 48.8
SMO367G0375 Selaginella moellendorffii HOM05D006532 ORTHO05D008570 1.9e-29 133.7 152 49.3
SMO139G0131 Selaginella moellendorffii HOM05D006532 ORTHO05D008570 1.3e-28 131.0 175 44.0
MCO01G189 Micromonas commoda HOM05D006532 ORTHO05D008570 1.8e-27 127.1 200 37.5
Gohir.A05G046832 Gossypium hirsutum HOM05D006532 ORTHO05D008570 1.5e-21 107.5 64 81.2
PRCOL_00005453 Prasinoderma coloniale HOM05D006532 ORTHO05D008570 4.3e-21 105.9 149 38.9
Cre02.g097550 Chlamydomonas reinhardtii HOM05D006532 ORTHO05D008570 3.7e-20 102.8 152 40.8
Ca_28981_v3 Cicer arietinum L. HOM05D006532 ORTHO05D008570 7.4e-13 78.6 150 34.7
Atru.chr6.459 Acer truncatum HOM05D006532 ORTHO05D008570 4.8e-12 75.9 123 47.2
SGA_v2.0_scaffold88G27190 Striga asiatica HOM05D006532 ORTHO05D008570 1.5e-10 70.9 60 63.3
Ca_28852_v3 Cicer arietinum L. HOM05D006532 ORTHO05D148468 3.8e-09 66.2 133 30.8
PGSC0003DMG401002229 Solanum tuberosum HOM05D006532 ORTHO05D008570 3.2e-08 63.2 88 50.0


User provided reference genes

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