Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_21823 Corylus avellana HOM05D006214 ORTHO05D007723 1.3e-91 339.7 173 100.0
Cfa013332 Carpinus fangiana HOM05D006214 ORTHO05D007723 6.0e-89 330.9 173 97.7
CiPaw.07G208400 Carya illinoinensis HOM05D006214 ORTHO05D007723 2.9e-83 312.0 170 89.4
QL12p026136 Quercus lobata HOM05D006214 ORTHO05D007723 2.9e-83 312.0 166 91.0
CiPaw.08G022500 Carya illinoinensis HOM05D006214 ORTHO05D007723 1.9e-79 299.3 167 86.2
Thecc.09G038200 Theobroma cacao HOM05D006214 ORTHO05D007723 1.2e-76 290.0 164 85.4
Dinv30243 Davidia involucrata HOM05D006214 ORTHO05D007723 2.6e-76 288.9 164 84.1
arahy.Tifrunner.gnm1.ann1.72Y1Y4 Arachis hypogaea HOM05D006214 ORTHO05D007723 6.4e-75 284.3 163 87.1
Oeu011261.1 Olea europaea HOM05D006214 ORTHO05D007723 8.4e-75 283.9 164 81.7
COL.COLO4_18710 Corchorus olitorius HOM05D006214 ORTHO05D007723 1.1e-74 283.5 164 82.9
GSVIVG01035713001 Vitis vinifera HOM05D006214 ORTHO05D007723 1.1e-74 283.5 164 83.5
Aqoxy7G01701 Aquilegia oxysepala HOM05D006214 ORTHO05D007723 1.4e-74 283.1 165 84.2
TWI34G1412 Tripterygium wilfordii HOM05D006214 ORTHO05D007723 2.4e-74 282.3 164 82.3
Potri.006G244300 Populus trichocarpa HOM05D006214 ORTHO05D007723 7.1e-74 280.8 164 82.3
Sed0020806 Sechium edule HOM05D006214 ORTHO05D007723 1.6e-73 279.6 162 82.1
AUR62032401 Chenopodium quinoa HOM05D006214 ORTHO05D007723 2.1e-73 279.3 164 81.7
Cpa.g.sc205.8 Carica papaya HOM05D006214 ORTHO05D007723 2.7e-73 278.9 164 81.7
Duzib150G0825 Durio zibethinus HOM05D006214 ORTHO05D007723 3.5e-73 278.5 165 82.4
Duzib168G0494 Durio zibethinus HOM05D006214 ORTHO05D007723 4.6e-73 278.1 164 85.4
PSO782G3114 Papaver somniferum HOM05D006214 ORTHO05D007723 4.6e-73 278.1 165 82.4
arahy.Tifrunner.gnm1.ann1.8TR5WT Arachis hypogaea HOM05D006214 ORTHO05D007723 6.0e-73 277.7 163 84.7
CSS0015630 Camellia sinensis var. sinensis HOM05D006214 ORTHO05D007723 6.0e-73 277.7 164 81.1
CSS0049547 Camellia sinensis var. sinensis HOM05D006214 ORTHO05D007723 6.0e-73 277.7 164 81.1
Ciclev10009715m.g Citrus clementina HOM05D006214 ORTHO05D007723 6.0e-73 277.7 164 82.3
Oeu014655.1 Olea europaea HOM05D006214 ORTHO05D007723 6.0e-73 277.7 164 81.7
VMungo0647G2273 Vigna mungo HOM05D006214 ORTHO05D007723 6.0e-73 277.7 163 86.5
Eucgr.C02883 Eucalyptus grandis HOM05D006214 ORTHO05D007723 7.8e-73 277.3 164 81.1
PSO063G0005 Papaver somniferum HOM05D006214 ORTHO05D007723 1.0e-72 276.9 165 82.4
PGR044G2495 Punica granatum HOM05D006214 ORTHO05D007723 1.0e-72 276.9 165 81.8
Sc06g0000690 Simmondsia chinensis HOM05D006214 ORTHO05D007723 1.0e-72 276.9 161 82.6
MELO3C011160.2 Cucumis melo HOM05D006214 ORTHO05D007723 1.3e-72 276.6 162 80.9
Hund25645 Selenicereus undatus HOM05D006214 ORTHO05D007723 1.7e-72 276.2 164 81.7
Gohir.D13G192400 Gossypium hirsutum HOM05D006214 ORTHO05D007723 2.3e-72 275.8 165 81.8
Gorai.013G218300 Gossypium raimondii HOM05D006214 ORTHO05D007723 2.3e-72 275.8 165 81.8
CANSAT25G2048 Cannabis sativa HOM05D006214 ORTHO05D007723 3.0e-72 275.4 166 81.9
Manes.03G064300 Manihot esculenta HOM05D006214 ORTHO05D007723 3.9e-72 275.0 164 80.5
Nitab4.5_0002393g0090 Nicotiana tabacum HOM05D006214 ORTHO05D007723 3.9e-72 275.0 164 79.9
Psat6g005800 Pisum sativum HOM05D006214 ORTHO05D007723 3.9e-72 275.0 163 84.0
CsaV3_2G031100 Cucumis sativus L. HOM05D006214 ORTHO05D007723 5.1e-72 274.6 162 80.9
Nitab4.5_0000250g0190 Nicotiana tabacum HOM05D006214 ORTHO05D007723 6.6e-72 274.2 164 79.9
TPR.G12079 Trifolium pratense HOM05D006214 ORTHO05D007723 8.7e-72 273.9 163 84.0
Nn8g39214 Nelumbo nucifera HOM05D006214 ORTHO05D007723 1.1e-71 273.5 164 79.3
Hma1.2p1_0003F.1_g003500 Hydrangea macrophylla HOM05D006214 ORTHO05D007723 1.5e-71 273.1 164 78.7
Lalb_Chr22g0361001 Lupinus albus HOM05D006214 ORTHO05D007723 1.5e-71 273.1 155 83.9
Prupe.1G454300 Prunus persica HOM05D006214 ORTHO05D007723 1.5e-71 273.1 169 78.1
TAR624G0931 Trochodendron aralioides HOM05D006214 ORTHO05D007723 2.5e-71 272.3 165 84.2
Lsat_1_v5_gn_6_11341 Lactuca sativa HOM05D006214 ORTHO05D007723 3.3e-71 271.9 165 79.4
Ca_12821_v3 Cicer arietinum L. HOM05D006214 ORTHO05D007723 4.3e-71 271.6 163 83.4
Ca_12822_v3 Cicer arietinum L. HOM05D006214 ORTHO05D007723 4.3e-71 271.6 163 83.4
Actinidia31216 Actinidia chinensis HOM05D006214 ORTHO05D007723 9.6e-71 270.4 164 79.9
Medtr1g008700 Medicago truncatula HOM05D006214 ORTHO05D007723 9.6e-71 270.4 164 79.9
PGSC0003DMG400014492 Solanum tuberosum HOM05D006214 ORTHO05D007723 1.3e-70 270.0 164 78.0
THA.LOC104803814 Tarenaya hassleriana HOM05D006214 ORTHO05D007723 1.3e-70 270.0 167 78.4
Rhsim02G0184100 Rhododendron simsii HOM05D006214 ORTHO05D007723 1.6e-70 269.6 159 81.1
Solyc08g068070.3 Solanum lycopersicum HOM05D006214 ORTHO05D007723 1.6e-70 269.6 164 78.0
Glyma.14G140400 Glycine max HOM05D006214 ORTHO05D007723 2.8e-70 268.9 166 81.9
Migut.A00249 Erythranthe guttata HOM05D006214 ORTHO05D007723 3.6e-70 268.5 163 78.5
Lj1g0018426 Lotus japonicus HOM05D006214 ORTHO05D007723 3.6e-70 268.5 167 81.4
DCAR_001036 Daucus carota HOM05D006214 ORTHO05D007723 4.8e-70 268.1 164 79.9
Peaxi162Scf00105g00059 Petunia axillaris HOM05D006214 ORTHO05D007723 4.8e-70 268.1 164 81.7
HanXRQChr07g0192221 Helianthus annuus HOM05D006214 ORTHO05D007723 8.1e-70 267.3 165 77.6
RcHm_v2.0_Chr6g0305591 Rosa chinensis HOM05D006214 ORTHO05D007723 3.1e-69 265.4 158 81.6
Cc08_g08530 Coffea canephora HOM05D006214 ORTHO05D007723 5.3e-69 264.6 161 78.9
Thhalv10026389m.g Eutrema salsugineum HOM05D006214 ORTHO05D007723 5.3e-69 264.6 168 76.8
Aa31LG2G16930 Aethionema arabicum HOM05D006214 ORTHO05D007723 9.0e-69 263.8 168 76.8
MD15G1099500 Malus domestica HOM05D006214 ORTHO05D007723 1.2e-68 263.5 158 84.8
Manes.16G067000 Manihot esculenta HOM05D006214 ORTHO05D007723 1.2e-68 263.5 164 77.4
SGA_v2.0_scaffold27G11530 Striga asiatica HOM05D006214 ORTHO05D007723 2.0e-68 262.7 171 76.0
Actinidia13304 Actinidia chinensis HOM05D006214 ORTHO05D007723 3.4e-68 261.9 153 82.4
Sp7g30450 Schrenkiella parvula HOM05D006214 ORTHO05D007723 3.4e-68 261.9 168 75.6
Ah.12g061040 Amaranthus hybridus HOM05D006214 ORTHO05D007723 4.5e-68 261.5 167 78.4
Phvul.001G060001 Phaseolus vulgaris HOM05D006214 ORTHO05D007723 4.5e-68 261.5 164 82.3
ATR1120G189 Amborella trichopoda HOM05D006214 ORTHO05D007723 7.6e-68 260.8 164 76.2
C01p06220 Brassica napus HOM05D003889 ORTHO05D004407 7.6e-68 260.8 167 76.6
CARHR240670 Cardamine hirsuta HOM05D006214 ORTHO05D007723 9.9e-68 260.4 161 78.3
A01p05650 Brassica napus HOM05D003889 ORTHO05D004407 1.7e-67 259.6 155 80.0
Sopen08g021960 Solanum pennellii HOM05D006214 ORTHO05D007723 1.7e-67 259.6 166 75.9
BolC1t00620H Brassica oleracea HOM05D006214 ORTHO05D007723 2.2e-67 259.2 169 75.7
BcaC09g52063 Brassica carinata HOM05D003889 ORTHO05D004407 4.9e-67 258.1 167 76.6
VMungo1309G2769 Vigna mungo HOM05D006214 ORTHO05D007723 8.4e-67 257.3 173 72.8
AL7G19050 Arabidopsis lyrata HOM05D006214 ORTHO05D007723 1.4e-66 256.5 170 74.1
AT4G32690 Arabidopsis thaliana HOM05D006214 ORTHO05D007723 1.9e-66 256.1 170 74.1
FvH4_2g36290 Fragaria vesca HOM05D006214 ORTHO05D007723 1.9e-66 256.1 156 82.7
BraA01t00535Z Brassica rapa HOM05D003889 ORTHO05D004407 3.2e-66 255.4 153 79.7
FAN20G2536 Fragaria x ananassa HOM05D006214 ORTHO05D007723 4.2e-66 255.0 156 82.1
Lj1g0018927 Lotus japonicus HOM05D006214 ORTHO05D007723 4.2e-66 255.0 173 73.4
Psat0s1478g0160 Pisum sativum HOM05D006214 ORTHO05D007723 5.4e-66 254.6 172 74.4
FAN15G3028 Fragaria x ananassa HOM05D006214 ORTHO05D007723 7.1e-66 254.2 156 77.6
Solyc08g068090.3 Solanum lycopersicum HOM05D006214 ORTHO05D007723 7.1e-66 254.2 163 75.5
Carub.0007s0784 Capsella rubella HOM05D006214 ORTHO05D007723 9.3e-66 253.8 161 75.8
Lalb_Chr08g0243361 Lupinus albus HOM05D006214 ORTHO05D007723 1.2e-65 253.4 175 73.7
FAN27G2409 Fragaria x ananassa HOM05D006214 ORTHO05D007723 1.6e-65 253.1 156 82.1
Sopen08g021970 Solanum pennellii HOM05D006214 ORTHO05D007723 1.6e-65 253.1 165 74.5
Glyma.04G079200 Glycine max HOM05D006214 ORTHO05D007723 2.3e-64 249.2 173 70.5
Phvul.009G104900 Phaseolus vulgaris HOM05D006214 ORTHO05D007723 2.3e-64 249.2 173 70.5
Medtr3g109420 Medicago truncatula HOM05D006214 ORTHO05D007723 1.5e-63 246.5 173 73.4
Lj8A606G25 Lonicera japonica HOM05D006214 ORTHO05D007723 4.3e-63 245.0 188 67.0
Ca_15627_v3 Cicer arietinum L. HOM05D006214 ORTHO05D007723 9.6e-63 243.8 171 71.3
SEGI_02532 Sequoiadendron giganteum HOM05D006214 ORTHO05D007723 3.7e-62 241.9 156 73.7
Os06g0591600 Oryza sativa ssp. japonica HOM05D006214 ORTHO05D007723 3.1e-61 238.8 168 70.8
Eucgr.L03669 Eucalyptus grandis HOM05D006214 ORTHO05D007723 5.3e-61 238.0 164 72.6
Zm00001eb386050 Zea mays HOM05D006214 ORTHO05D007723 3.4e-60 235.3 166 69.3
Atru.chr7.2182 Acer truncatum HOM05D006214 ORTHO05D007723 5.8e-60 234.6 139 79.9
Atru.chr7.2299 Acer truncatum HOM05D006214 ORTHO05D007723 5.8e-60 234.6 139 79.9
TPR.G1342 Trifolium pratense HOM05D006214 ORTHO05D007723 1.7e-59 233.0 175 70.3
HPP92_005176 Vanilla planifolia HOM05D006214 ORTHO05D007723 1.8e-56 223.0 186 61.8
unitig_0.g2807 Utricularia gibba HOM05D006435 ORTHO05D008262 3.0e-56 222.2 141 80.1
SMO164G0258 Selaginella moellendorffii HOM05D006214 ORTHO05D007723 7.4e-55 217.6 155 67.1
Gohir.D05G051050 Gossypium hirsutum HOM05D006214 ORTHO05D007723 1.8e-53 213.0 178 62.9
arahy.Tifrunner.gnm1.ann1.LJ0T63 Arachis hypogaea HOM05D006214 ORTHO05D007723 3.1e-53 212.2 142 74.6
Sabra06G0191200 Salix brachista HOM05D006214 ORTHO05D007723 3.1e-53 212.2 165 68.5
CAN.G886.7 Capsicum annuum HOM05D006214 ORTHO05D007723 6.9e-53 211.1 134 78.4
AagrBONN_evm.TU.Sc2ySwM_368.1910 Anthoceros agrestis HOM05D006214 ORTHO05D007723 1.2e-52 210.3 158 67.7
Pp3c1_3380 Physcomitrium patens HOM05D006214 ORTHO05D007723 4.5e-52 208.4 151 66.9
Pp3c6_250 Physcomitrium patens HOM05D006214 ORTHO05D007723 2.9e-51 205.7 155 62.6
AUR62024819 Chenopodium quinoa HOM05D006214 ORTHO05D007723 1.1e-50 203.8 119 80.7
ECA233G3302 Erigeron canadensis HOM05D006214 ORTHO05D007723 1.8e-48 196.4 306 41.5
Gorai.009G052700 Gossypium raimondii HOM05D006214 ORTHO05D007723 3.7e-46 188.7 111 80.2
EL10Ac2g02522 Beta vulgaris HOM05D006214 ORTHO05D007723 2.5e-42 176.0 163 60.7
ClCG08G012410 Citrullus lanatus HOM05D006214 ORTHO05D007723 2.4e-37 159.5 203 46.3
MBI04_g08934_MAGBIO Magnolia biondii HOM05D006214 ORTHO05D003073 5.0e-35 151.8 88 83.0
TAR636G1550 Trochodendron aralioides HOM05D006214 ORTHO05D007723 8.5e-35 151.0 212 44.8
CSS0020447 Camellia sinensis var. sinensis HOM05D006214 ORTHO05D007723 7.0e-29 131.3 84 79.8
Potri.018G036200 Populus trichocarpa HOM05D006214 ORTHO05D007723 2.0e-23 113.2 70 72.9
CSS0007395 Camellia sinensis var. sinensis HOM05D006214 ORTHO05D007723 1.4e-21 107.1 61 77.0
Lsat_1_v5_gn_6_11301 Lactuca sativa HOM05D006214 ORTHO05D007723 1.2e-20 104.0 67 76.1
C01p47490 Brassica napus HOM05D006214 ORTHO05D007723 3.4e-15 85.9 79 51.9
HanXRQChr07g0195131 Helianthus annuus HOM05D006214 ORTHO05D007723 1.6e-12 77.0 81 55.6
Glyma.06G080700 Glycine max HOM05D006214 ORTHO05D007723 2.0e-12 76.6 67 50.7
Peaxi162Scf00105g00513 Petunia axillaris HOM05D006214 ORTHO05D007723 3.8e-11 72.4 88 44.3
arahy.Tifrunner.gnm1.ann1.YGZX15 Arachis hypogaea HOM05D000254 ORTHO05D000165 1.6e-09 67.0 117 35.9
BolC1t04720H Brassica oleracea HOM05D006214 ORTHO05D007723 4.7e-09 65.5 44 63.6
Nitab4.5_0000250g0200 Nicotiana tabacum HOM05D006214 ORTHO05D007723 4.4e-07 58.9 82 43.9
SMO164G0257 Selaginella moellendorffii HOM05D014720 ORTHO05D377594 2.8e-06 56.2 47 61.7


User provided reference genes

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