Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_21752 Corylus avellana HOM05D006706 ORTHO05D008794 2.3e-75 285.4 136 100.0
Haze_21755 Corylus avellana HOM05D006706 ORTHO05D008794 6.2e-73 277.3 136 97.1
Cfa013279 Carpinus fangiana HOM05D006706 ORTHO05D008794 4.9e-70 267.7 136 93.4
CiPaw.08G020300 Carya illinoinensis HOM05D006706 ORTHO05D008794 2.1e-65 252.3 141 85.8
QL12p025335 Quercus lobata HOM05D006706 ORTHO05D008794 5.2e-64 247.7 136 85.3
Prupe.1G459500 Prunus persica HOM05D006706 ORTHO05D008794 3.8e-62 241.5 137 83.9
RcHm_v2.0_Chr1g0366021 Rosa chinensis HOM05D006706 ORTHO05D008794 3.8e-62 241.5 136 83.1
CiPaw.07G211900 Carya illinoinensis HOM05D006706 ORTHO05D008794 4.9e-62 241.1 131 87.0
FAN27G0070 Fragaria x ananassa HOM05D006706 ORTHO05D008794 3.2e-61 238.4 136 81.6
Duzib187G1270 Durio zibethinus HOM05D006706 ORTHO05D008794 9.2e-61 236.9 135 82.2
FvH4_2g36680 Fragaria vesca HOM05D006706 ORTHO05D008794 9.2e-61 236.9 136 80.9
FAN20G0608 Fragaria x ananassa HOM05D006706 ORTHO05D008794 9.2e-61 236.9 136 80.9
Thecc.09G008100 Theobroma cacao HOM05D006706 ORTHO05D008794 9.2e-61 236.9 137 81.8
Duzib168G0001 Durio zibethinus HOM05D006706 ORTHO05D008794 1.2e-60 236.5 135 83.0
MD08G1127800 Malus domestica HOM05D006706 ORTHO05D008794 1.2e-60 236.5 136 80.9
RcHm_v2.0_Chr6g0305051 Rosa chinensis HOM05D006706 ORTHO05D008794 7.8e-60 233.8 136 81.6
Potri.018G008000 Populus trichocarpa HOM05D006706 ORTHO05D008794 1.0e-59 233.4 124 89.5
Cpa.g.sc23.24 Carica papaya HOM05D006706 ORTHO05D008794 6.6e-59 230.7 141 79.4
Sabra18G0015100 Salix brachista HOM05D006706 ORTHO05D008794 6.6e-59 230.7 136 83.1
CANSAT78G2093 Cannabis sativa HOM05D006706 ORTHO05D008794 1.1e-58 229.9 123 87.0
Ca_15656_v3 Cicer arietinum L. HOM05D006706 ORTHO05D008794 1.1e-58 229.9 144 76.4
Ca_15664_v3 Cicer arietinum L. HOM05D006706 ORTHO05D008794 1.1e-58 229.9 144 76.4
Atru.chr7.2653 Acer truncatum HOM05D006706 ORTHO05D008794 1.5e-58 229.6 121 88.4
Glyma.04G075900 Glycine max HOM05D006706 ORTHO05D008794 1.5e-58 229.6 144 78.5
COL.COLO4_19024 Corchorus olitorius HOM05D006706 ORTHO05D008794 2.5e-58 228.8 134 83.6
THA.LOC104814973 Tarenaya hassleriana HOM05D006706 ORTHO05D008794 2.5e-58 228.8 135 80.7
TWI34G0378 Tripterygium wilfordii HOM05D006706 ORTHO05D008794 2.5e-58 228.8 136 81.6
DCAR_006314 Daucus carota HOM05D006706 ORTHO05D008794 3.3e-58 228.4 132 82.6
Ciclev10009845m.g Citrus clementina HOM05D006706 ORTHO05D008794 4.3e-58 228.0 139 79.1
Manes.03G004300 Manihot esculenta HOM05D006706 ORTHO05D008794 4.3e-58 228.0 127 85.8
Actinidia22256 Actinidia chinensis HOM05D006706 ORTHO05D008794 7.3e-58 227.3 120 85.8
Nn3g19671 Nelumbo nucifera HOM05D006706 ORTHO05D008794 7.3e-58 227.3 134 80.6
TPR.G12362 Trifolium pratense HOM05D006706 ORTHO05D008794 9.6e-58 226.9 143 77.6
GSVIVG01035513001 Vitis vinifera HOM05D006706 ORTHO05D008794 9.6e-58 226.9 122 83.6
Lj1g0012669 Lotus japonicus HOM05D006706 ORTHO05D008794 1.6e-57 226.1 123 87.0
PGR044G2738 Punica granatum HOM05D006706 ORTHO05D008794 2.1e-57 225.7 133 82.7
Dinv26561 Davidia involucrata HOM05D006706 ORTHO05D008794 3.6e-57 224.9 122 86.9
Rhsim07G0178100 Rhododendron simsii HOM05D006706 ORTHO05D008794 3.6e-57 224.9 118 89.0
Glyma.06G077100 Glycine max HOM05D006706 ORTHO05D008794 4.7e-57 224.6 136 80.1
arahy.Tifrunner.gnm1.ann1.G0PQAF Arachis hypogaea HOM05D006706 ORTHO05D008794 8.1e-57 223.8 122 85.2
CSS0022194 Camellia sinensis var. sinensis HOM05D006706 ORTHO05D008794 8.1e-57 223.8 120 87.5
Gorai.010G122100 Gossypium raimondii HOM05D006706 ORTHO05D008794 1.1e-56 223.4 120 86.7
Lalb_Chr23g0269141 Lupinus albus HOM05D006706 ORTHO05D008794 1.1e-56 223.4 141 78.7
Hund07113 Selenicereus undatus HOM05D006706 ORTHO05D008794 1.1e-56 223.4 128 82.0
VMungo1309G0608 Vigna mungo HOM05D006706 ORTHO05D008794 1.1e-56 223.4 143 77.6
Lj7C748T8 Lonicera japonica HOM05D006706 ORTHO05D008794 1.4e-56 223.0 118 85.6
Peaxi162Scf00459g00840 Petunia axillaris HOM05D006706 ORTHO05D008794 1.4e-56 223.0 132 81.1
Eucgr.C04010 Eucalyptus grandis HOM05D006706 ORTHO05D008794 1.8e-56 222.6 118 86.4
vmacro05047 Vaccinium macrocarpon HOM05D006706 ORTHO05D008794 1.8e-56 222.6 136 80.9
arahy.Tifrunner.gnm1.ann1.92NGGW Arachis hypogaea HOM05D006706 ORTHO05D008794 2.4e-56 222.2 122 84.4
Nitab4.5_0010092g0010 Nicotiana tabacum HOM05D006706 ORTHO05D008794 3.1e-56 221.9 119 86.6
PSO063G0792 Papaver somniferum HOM05D006706 ORTHO05D008794 4.0e-56 221.5 120 85.8
Medtr3g108900 Medicago truncatula HOM05D006706 ORTHO05D008794 5.2e-56 221.1 140 77.9
Psat0s1809g0040 Pisum sativum HOM05D006706 ORTHO05D008794 5.2e-56 221.1 143 75.5
Solyc12g096390.2 Solanum lycopersicum HOM05D006706 ORTHO05D008794 6.9e-56 220.7 119 86.6
Sopen12g032240 Solanum pennellii HOM05D006706 ORTHO05D008794 6.9e-56 220.7 119 86.6
ECA246G3311 Erigeron canadensis HOM05D006706 ORTHO05D008794 9.0e-56 220.3 119 85.7
HanXRQChr17g0538031 Helianthus annuus HOM05D006706 ORTHO05D008794 9.0e-56 220.3 133 78.9
PSO170G0804 Papaver somniferum HOM05D006706 ORTHO05D008794 9.0e-56 220.3 123 83.7
PGSC0003DMG400029370 Solanum tuberosum HOM05D006706 ORTHO05D008794 9.0e-56 220.3 119 85.7
Lsat_1_v5_gn_3_19441 Lactuca sativa HOM05D006706 ORTHO05D008794 1.2e-55 219.9 140 77.9
Sed0007748 Sechium edule HOM05D006706 ORTHO05D008794 1.2e-55 219.9 129 80.6
CAN.G566.65 Capsicum annuum HOM05D006706 ORTHO05D008794 1.5e-55 219.5 129 81.4
Nitab4.5_0001159g0140 Nicotiana tabacum HOM05D006706 ORTHO05D008794 2.6e-55 218.8 119 85.7
Phvul.009G101700 Phaseolus vulgaris HOM05D006706 ORTHO05D008794 2.6e-55 218.8 140 77.1
CsaV3_2G031370 Cucumis sativus L. HOM05D006706 ORTHO05D008794 4.4e-55 218.0 130 80.0
Migut.A00436 Erythranthe guttata HOM05D006706 ORTHO05D008794 4.4e-55 218.0 125 80.8
MBI14_g10732_MAGBIO Magnolia biondii HOM05D006706 ORTHO05D008794 1.7e-54 216.1 136 77.2
SalBow4G1165 Salvia bowleyana HOM05D006706 ORTHO05D008794 2.2e-54 215.7 117 83.8
BraA03t09810Z Brassica rapa HOM05D006706 ORTHO05D008794 2.9e-54 215.3 141 73.0
AL6G21240 Arabidopsis lyrata HOM05D006706 ORTHO05D008794 6.4e-54 214.2 141 73.8
Oeu018568.1 Olea europaea HOM05D006706 ORTHO05D008794 6.4e-54 214.2 130 79.2
A03p04700 Brassica napus HOM05D006706 ORTHO05D008794 1.1e-53 213.4 136 73.5
Aqoxy7G02908 Aquilegia oxysepala HOM05D006706 ORTHO05D008794 1.4e-53 213.0 137 74.5
Sp6g32760 Schrenkiella parvula HOM05D006706 ORTHO05D008794 1.4e-53 213.0 134 74.6
AT5G10700 Arabidopsis thaliana HOM05D006706 ORTHO05D008794 2.4e-53 212.2 117 82.9
Aa31LG3G16430 Aethionema arabicum HOM05D006706 ORTHO05D008794 4.2e-53 211.5 128 78.1
MSTRG.25780 Avicennia marina HOM05D006706 ORTHO05D008794 4.2e-53 211.5 125 78.4
BcaB01g05507 Brassica carinata HOM05D006706 ORTHO05D008794 4.2e-53 211.5 141 70.9
C03p05410 Brassica napus HOM05D006706 ORTHO05D008794 4.2e-53 211.5 141 70.9
CDE02G4751 Ceratophyllum demersum HOM05D006706 ORTHO05D008794 4.2e-53 211.5 124 79.8
MELO3C011186.2 Cucumis melo HOM05D006706 ORTHO05D008794 4.2e-53 211.5 130 79.2
AUR62020287 Chenopodium quinoa HOM05D006706 ORTHO05D008794 5.4e-53 211.1 136 75.7
Carub.0006s0917 Capsella rubella HOM05D006706 ORTHO05D008794 7.1e-53 210.7 128 78.9
BcaC04g19291 Brassica carinata HOM05D006706 ORTHO05D008794 9.3e-53 210.3 134 73.9
CARHR202620 Cardamine hirsuta HOM05D006706 ORTHO05D008794 9.3e-53 210.3 138 73.9
BcaB01g06271 Brassica carinata HOM05D006706 ORTHO05D008794 1.2e-52 209.9 132 75.0
Thhalv10014763m.g Eutrema salsugineum HOM05D006706 ORTHO05D008794 1.2e-52 209.9 132 74.2
ATR0580G320 Amborella trichopoda HOM05D006706 ORTHO05D008794 3.5e-52 208.4 123 81.3
HPP92_021967 Vanilla planifolia HOM05D006706 ORTHO05D008794 6.2e-49 197.6 133 72.9
Zm00001eb071580 Zea mays HOM05D006706 ORTHO05D008794 6.2e-49 197.6 134 70.1
SEGI_18071 Sequoiadendron giganteum HOM05D006706 ORTHO05D008794 1.4e-48 196.4 118 74.6
HPP92_021941 Vanilla planifolia HOM05D006706 ORTHO05D008794 2.4e-48 195.7 133 72.2
Os04g0605200 Oryza sativa ssp. japonica HOM05D006706 ORTHO05D008794 5.3e-48 194.5 127 70.9
Pp3c18_3890 Physcomitrium patens HOM05D006706 ORTHO05D008794 2.9e-46 188.7 138 63.8
AUR62037716 Chenopodium quinoa HOM05D006706 ORTHO05D008794 6.4e-46 187.6 123 73.2
AagrBONN_evm.TU.Sc2ySwM_228.645 Anthoceros agrestis HOM05D000036 ORTHO05D038461 8.4e-46 187.2 137 62.0
SMO203G0167 Selaginella moellendorffii HOM05D006706 ORTHO05D008794 1.9e-45 186.0 125 69.6
MD15G1107200 Malus domestica HOM05D006706 ORTHO05D008794 1.2e-44 183.3 146 67.1
SGA_v2.0_scaffold193G40663 Striga asiatica HOM05D006706 ORTHO05D008794 4.6e-44 181.4 150 61.3
ClCG08G012660 Citrullus lanatus HOM05D006706 ORTHO05D008794 3.9e-43 178.3 142 64.1
Mapoly0013s0161 Marchantia polymorpha HOM05D006706 ORTHO05D008794 2.4e-40 169.1 120 63.3
Ah.10g024780 Amaranthus hybridus HOM05D006706 ORTHO05D008794 1.7e-38 162.9 99 73.7
unitig_21.g20325 Utricularia gibba HOM05D006706 ORTHO05D008794 6.4e-38 161.0 138 54.3
CBR_g3167 Chara braunii HOM05D006706 ORTHO05D008794 1.1e-37 160.2 135 58.5
Cre10.g449350 Chlamydomonas reinhardtii HOM05D006706 ORTHO05D008794 1.8e-35 152.9 119 59.7
MCO07G367 Micromonas commoda HOM05D006706 ORTHO05D008794 2.5e-34 149.1 123 57.7
TAR636G3689 Trochodendron aralioides HOM05D006706 ORTHO05D008794 9.0e-24 114.0 75 70.7
Gohir.D06G107400 Gossypium hirsutum HOM05D006706 ORTHO05D008794 2.0e-23 112.8 59 83.1
Gohir.A06G105300 Gossypium hirsutum HOM05D006706 ORTHO05D008794 5.9e-23 111.3 59 81.4
EL10Ac2g02413 Beta vulgaris HOM05D006706 ORTHO05D008794 1.0e-22 110.5 69 73.9
Sc06g0000170 Simmondsia chinensis HOM05D006706 ORTHO05D008794 1.1e-21 107.1 74 64.9
PRCOL_00004161 Prasinoderma coloniale HOM05D006706 ORTHO05D008794 1.9e-21 106.3 120 50.8
Haze_27087 Corylus avellana HOM05D006706 ORTHO05D008794 1.2e-20 103.6 116 45.7
CDE06G2578 Ceratophyllum demersum HOM05D006706 ORTHO05D008794 6.3e-17 91.3 66 62.1
A10p26910 Brassica napus HOM05D006706 ORTHO05D028018 6.3e-09 64.7 34 85.3
Sed0005624 Sechium edule HOM05D006706 ORTHO05D373521 1.2e-07 60.5 60 50.0


User provided reference genes

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