Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_21707 Corylus avellana HOM05D003482 ORTHO05D044810 7.3e-95 350.5 174 100.0
Cfa013321 Carpinus fangiana HOM05D003482 ORTHO05D004194 5.0e-19 98.6 69 72.5
CiPaw.07G208900 Carya illinoinensis HOM05D003482 ORTHO05D004194 3.0e-16 89.4 69 62.3
QL12p026010 Quercus lobata HOM05D003482 ORTHO05D004194 8.9e-16 87.8 69 62.3
FvH4_2g36370 Fragaria vesca HOM05D003482 ORTHO05D004194 2.9e-14 82.8 69 60.9
FAN20G1504 Fragaria x ananassa HOM05D003482 ORTHO05D004194 2.9e-14 82.8 69 60.9
FAN27G0167 Fragaria x ananassa HOM05D003482 ORTHO05D004194 2.9e-14 82.8 69 60.9
RcHm_v2.0_Chr6g0305511 Rosa chinensis HOM05D003482 ORTHO05D004194 3.7e-14 82.4 69 60.9
Haze_21808 Corylus avellana HOM05D003482 ORTHO05D044810 6.4e-14 81.6 61 75.4
Medtr1g008980 Medicago truncatula HOM05D003482 ORTHO05D004194 6.4e-14 81.6 69 58.0
Thecc.09G004000 Theobroma cacao HOM05D003482 ORTHO05D004194 6.4e-14 81.6 69 60.9
FAN15G0261 Fragaria x ananassa HOM05D003482 ORTHO05D004194 8.3e-14 81.3 69 59.4
Ca_12826_v3 Cicer arietinum L. HOM05D003482 ORTHO05D004194 1.1e-13 80.9 69 56.5
TAR506G0002 Trochodendron aralioides HOM05D003482 ORTHO05D004194 1.1e-13 80.9 69 59.4
Psat6g006000 Pisum sativum HOM05D003482 ORTHO05D004194 1.4e-13 80.5 69 56.5
TAR626G0827 Trochodendron aralioides HOM05D003482 ORTHO05D004194 1.8e-13 80.1 79 55.7
Duzib168G0916 Durio zibethinus HOM05D003482 ORTHO05D004194 3.2e-13 79.3 69 59.4
SalBow4G3081 Salvia bowleyana HOM05D003482 ORTHO05D004194 4.1e-13 79.0 69 58.0
Atru.chr7.2677 Acer truncatum HOM05D003482 ORTHO05D004194 7.0e-13 78.2 69 58.0
Dinv11875 Davidia involucrata HOM05D003482 ORTHO05D004194 9.2e-13 77.8 69 59.4
Potri.018G003400 Populus trichocarpa HOM05D003482 ORTHO05D004194 9.2e-13 77.8 69 59.4
COL.COLO4_18624 Corchorus olitorius HOM05D003482 ORTHO05D004194 1.2e-12 77.4 69 58.0
Phvul.001G077100 Phaseolus vulgaris HOM05D003482 ORTHO05D004194 1.2e-12 77.4 69 56.5
DCAR_004550 Daucus carota HOM05D003482 ORTHO05D004194 1.6e-12 77.0 69 56.5
Glyma.17G188300 Glycine max HOM05D003482 ORTHO05D004194 1.6e-12 77.0 69 55.1
MSTRG.11822 Avicennia marina HOM05D003482 ORTHO05D004194 2.0e-12 76.6 69 56.5
Glyma.14G139800 Glycine max HOM05D003482 ORTHO05D004194 2.0e-12 76.6 69 55.1
Nn8g40986 Nelumbo nucifera HOM05D003482 ORTHO05D004194 2.0e-12 76.6 69 56.5
Oeu059294.1 Olea europaea HOM05D003482 ORTHO05D004194 2.0e-12 76.6 69 55.1
Potri.018G000101 Populus trichocarpa HOM05D003482 ORTHO05D004194 2.0e-12 76.6 69 58.0
Prupe.1G455100 Prunus persica HOM05D003482 ORTHO05D004194 2.0e-12 76.6 69 58.0
GSVIVG01035556001 Vitis vinifera HOM05D003482 ORTHO05D004194 2.0e-12 76.6 79 54.4
Cpa.g.sc328.6 Carica papaya HOM05D003482 ORTHO05D004194 2.7e-12 76.3 69 58.0
Eucgr.C03989 Eucalyptus grandis HOM05D003482 ORTHO05D004194 2.7e-12 76.3 69 56.5
Lalb_Chr14g0362391 Lupinus albus HOM05D003482 ORTHO05D004194 2.7e-12 76.3 69 56.5
SGA_v2.0_scaffold27G11648 Striga asiatica HOM05D003482 ORTHO05D004194 2.7e-12 76.3 69 58.0
CARHR188650 Cardamine hirsuta HOM05D003482 ORTHO05D004194 3.5e-12 75.9 69 55.1
Manes.03G001800 Manihot esculenta HOM05D003482 ORTHO05D004194 3.5e-12 75.9 70 54.3
THA.LOC104814963 Tarenaya hassleriana HOM05D003482 ORTHO05D004194 3.5e-12 75.9 69 56.5
Lj7C753G1 Lonicera japonica HOM05D003482 ORTHO05D004194 4.6e-12 75.5 69 59.4
Potri.018G003600 Populus trichocarpa HOM05D003482 ORTHO05D004194 4.6e-12 75.5 69 56.5
Sp2g22640 Schrenkiella parvula HOM05D003482 ORTHO05D004194 4.6e-12 75.5 69 53.6
Aqoxy7G02727 Aquilegia oxysepala HOM05D003482 ORTHO05D004194 6.0e-12 75.1 69 56.5
arahy.Tifrunner.gnm1.ann1.N6E37M Arachis hypogaea HOM05D003482 ORTHO05D004194 7.8e-12 74.7 69 53.6
C07p42960 Brassica napus HOM05D003482 ORTHO05D004194 7.8e-12 74.7 69 53.6
BolC7t44825H Brassica oleracea HOM05D003482 ORTHO05D004194 7.8e-12 74.7 69 53.6
Migut.A00459 Erythranthe guttata HOM05D003482 ORTHO05D004194 7.8e-12 74.7 69 56.5
Thhalv10003586m.g Eutrema salsugineum HOM05D003482 ORTHO05D004194 7.8e-12 74.7 69 53.6
Lj1g0006594 Lotus japonicus HOM05D003482 ORTHO05D004194 7.8e-12 74.7 69 52.2
Ciclev10007354m.g Citrus clementina HOM05D003482 ORTHO05D004194 1.0e-11 74.3 70 55.7
Sc14g0002010 Simmondsia chinensis HOM05D003482 ORTHO05D004194 1.0e-11 74.3 69 55.1
A06p35580 Brassica napus HOM05D003482 ORTHO05D004194 1.3e-11 73.9 69 53.6
BraA06t26483Z Brassica rapa HOM05D003482 ORTHO05D004194 1.3e-11 73.9 69 53.6
Carub.0006s2266 Capsella rubella HOM05D003482 ORTHO05D004194 1.3e-11 73.9 69 53.6
MD08G1123100 Malus domestica HOM05D003482 ORTHO05D004194 1.3e-11 73.9 69 55.1
AL6G36450 Arabidopsis lyrata HOM05D003482 ORTHO05D004194 1.7e-11 73.6 69 52.2
arahy.Tifrunner.gnm1.ann1.21Z9DD Arachis hypogaea HOM05D003482 ORTHO05D004194 1.7e-11 73.6 69 53.6
BcaB07g29924 Brassica carinata HOM05D003482 ORTHO05D004194 1.7e-11 73.6 69 52.2
HanXRQChr03g0082881 Helianthus annuus HOM05D003482 ORTHO05D004194 1.7e-11 73.6 69 56.5
Potri.006G276600 Populus trichocarpa HOM05D003482 ORTHO05D004194 1.7e-11 73.6 69 53.6
vmacro05100 Vaccinium macrocarpon HOM05D003482 ORTHO05D004194 1.7e-11 73.6 69 59.4
CAN.G195.3 Capsicum annuum HOM05D003482 ORTHO05D004194 3.0e-11 72.8 69 58.0
PGR044G0156 Punica granatum HOM05D003482 ORTHO05D004194 3.0e-11 72.8 69 53.6
Actinidia14155 Actinidia chinensis HOM05D003482 ORTHO05D004194 3.9e-11 72.4 69 58.0
AT5G24810 Arabidopsis thaliana HOM05D003482 ORTHO05D004194 3.9e-11 72.4 69 52.2
MD15G1100800 Malus domestica HOM05D003482 ORTHO05D004194 3.9e-11 72.4 69 53.6
TWI32G0788 Tripterygium wilfordii HOM05D003482 ORTHO05D004194 3.9e-11 72.4 69 56.5
ATR0626G323 Amborella trichopoda HOM05D003482 ORTHO05D004194 5.0e-11 72.0 69 55.1
BcaC03g17943 Brassica carinata HOM05D003482 ORTHO05D004194 5.0e-11 72.0 69 50.7
A02p40080 Brassica napus HOM05D003482 ORTHO05D004194 5.0e-11 72.0 69 50.7
C02p60040 Brassica napus HOM05D003482 ORTHO05D004194 5.0e-11 72.0 69 50.7
BraA02t08971Z Brassica rapa HOM05D003482 ORTHO05D004194 5.0e-11 72.0 69 50.7
Haze_21807 Corylus avellana HOM05D003482 ORTHO05D004194 5.0e-11 72.0 38 92.1
Nitab4.5_0000970g0010 Nicotiana tabacum HOM05D003482 ORTHO05D004194 5.0e-11 72.0 69 58.0
BolC2t12059H Brassica oleracea HOM05D003482 ORTHO05D004194 6.6e-11 71.6 69 50.7
ECA240G1915 Erigeron canadensis HOM05D003482 ORTHO05D004194 6.6e-11 71.6 69 56.5
Manes.16G137200 Manihot esculenta HOM05D003482 ORTHO05D004194 6.6e-11 71.6 69 52.2
Rhsim07G0170800 Rhododendron simsii HOM05D003482 ORTHO05D004194 6.6e-11 71.6 69 58.0
Sed0005804 Sechium edule HOM05D003482 ORTHO05D004194 6.6e-11 71.6 68 54.4
CANSAT25G1343 Cannabis sativa HOM05D003482 ORTHO05D004194 8.6e-11 71.2 69 55.1
Peaxi162Scf00213g01025 Petunia axillaris HOM05D003482 ORTHO05D004194 8.6e-11 71.2 69 56.5
BcaNung01256 Brassica carinata HOM05D003482 ORTHO05D004194 1.5e-10 70.5 69 50.7
Lalb_Chr22g0361011 Lupinus albus HOM05D003482 ORTHO05D004194 1.9e-10 70.1 69 53.6
Gohir.A05G066000 Gossypium hirsutum HOM05D003482 ORTHO05D004194 2.5e-10 69.7 68 54.4
Gohir.D05G068400 Gossypium hirsutum HOM05D003482 ORTHO05D004194 2.5e-10 69.7 68 54.4
Gorai.009G069300 Gossypium raimondii HOM05D003482 ORTHO05D004194 2.5e-10 69.7 68 54.4
Nitab4.5_0000919g0060 Nicotiana tabacum HOM05D003482 ORTHO05D004194 2.5e-10 69.7 69 55.1
Aa31LG11G4020 Aethionema arabicum HOM05D003482 ORTHO05D004194 3.3e-10 69.3 69 50.7
HanXRQChr13g0411821 Helianthus annuus HOM05D003482 ORTHO05D004194 3.3e-10 69.3 69 53.6
Lsat_1_v5_gn_5_60380 Lactuca sativa HOM05D003482 ORTHO05D004194 3.3e-10 69.3 69 55.1
Solyc08g074280.4 Solanum lycopersicum HOM05D003482 ORTHO05D004194 3.3e-10 69.3 69 56.5
Sopen08g022930 Solanum pennellii HOM05D003482 ORTHO05D004194 3.3e-10 69.3 69 56.5
MBI13_g31548_MAGBIO Magnolia biondii HOM05D003482 ORTHO05D004194 4.3e-10 68.9 69 53.6
ClCG11G013930 Citrullus lanatus HOM05D003482 ORTHO05D004194 7.3e-10 68.2 69 50.7
unitig_92.g28144 Utricularia gibba HOM05D003482 ORTHO05D004194 9.5e-10 67.8 69 52.2
Zm00001eb272880 Zea mays HOM05D003482 ORTHO05D004194 9.5e-10 67.8 69 56.5
Ah.10g033820 Amaranthus hybridus HOM05D002718 ORTHO05D003269 1.2e-09 67.4 69 52.2
CSS0039275 Camellia sinensis var. sinensis HOM05D003482 ORTHO05D004194 1.2e-09 67.4 69 55.1
CDE05G0655 Ceratophyllum demersum HOM05D003482 ORTHO05D004194 2.1e-09 66.6 69 53.6
PSO423G0073 Papaver somniferum HOM05D003482 ORTHO05D004194 2.1e-09 66.6 69 53.6
PSO596G0002 Papaver somniferum HOM05D003482 ORTHO05D004194 2.1e-09 66.6 69 53.6
PSO755G0001 Papaver somniferum HOM05D003482 ORTHO05D004194 2.1e-09 66.6 69 53.6
EL10Ac2g03705 Beta vulgaris HOM05D003482 ORTHO05D004194 2.8e-09 66.2 69 49.3
HPP92_015798 Vanilla planifolia HOM05D003482 ORTHO05D004194 4.7e-09 65.5 69 52.2
MELO3C003597.2 Cucumis melo HOM05D003482 ORTHO05D004194 6.2e-09 65.1 69 49.3
HanXRQChr03g0081371 Helianthus annuus HOM05D003482 ORTHO05D004194 6.2e-09 65.1 69 50.7
CsaV3_3G047320 Cucumis sativus L. HOM05D003482 ORTHO05D004194 1.4e-08 63.9 69 47.8
Pp3c5_19100 Physcomitrium patens HOM05D003482 ORTHO05D004194 4.0e-08 62.4 69 42.0
Hund03269 Selenicereus undatus HOM05D003482 ORTHO05D004194 4.0e-08 62.4 69 49.3
Os06g0701300 Oryza sativa ssp. japonica HOM05D003482 ORTHO05D004194 6.8e-08 61.6 69 52.2
Pp3c16_18060 Physcomitrium patens HOM05D003482 ORTHO05D004194 8.9e-08 61.2 69 39.1
AagrBONN_evm.TU.Sc2ySwM_228.3219 Anthoceros agrestis HOM05D003482 ORTHO05D004194 1.7e-06 57.0 69 43.5
COL.COLO4_18622 Corchorus olitorius HOM05D003482 ORTHO05D004194 1.7e-06 57.0 108 34.3
SMO353G0164 Selaginella moellendorffii HOM05D003482 ORTHO05D004194 2.2e-06 56.6 69 42.0
SMO353G0165 Selaginella moellendorffii HOM05D003482 ORTHO05D004194 2.2e-06 56.6 69 42.0
Sabra06G0214300 Salix brachista HOM05D003482 ORTHO05D004194 2.9e-06 56.2 129 32.6
Mapoly0007s0194 Marchantia polymorpha HOM05D003482 ORTHO05D004194 3.7e-06 55.8 69 42.0


User provided reference genes

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