Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_21656 Corylus avellana HOM05D004019 ORTHO05D005136 0.0e+00 1771.9 907 100.0
CiPaw.07G216600 Carya illinoinensis HOM05D004019 ORTHO05D005136 0.0e+00 1203.0 907 70.8
Prupe.1G464500 Prunus persica HOM05D004019 ORTHO05D005136 0.0e+00 1076.2 919 64.3
FAN24G2881 Fragaria x ananassa HOM05D004019 ORTHO05D005136 3.9e-296 1021.5 909 61.6
RcHm_v2.0_Chr6g0312581 Rosa chinensis HOM05D004019 ORTHO05D005136 8.6e-296 1020.4 910 61.1
MD15G1113500 Malus domestica HOM05D004019 ORTHO05D005136 1.6e-294 1016.1 922 61.6
Atru.chr7.2305 Acer truncatum HOM05D004019 ORTHO05D005136 1.8e-293 1012.7 915 60.2
FAN20G0521 Fragaria x ananassa HOM05D004019 ORTHO05D005136 1.5e-292 1009.6 917 60.4
FvH4_2g30330 Fragaria vesca HOM05D004019 ORTHO05D005136 4.9e-291 1004.6 910 60.9
CANSAT25G1365 Cannabis sativa HOM05D004019 ORTHO05D005136 2.5e-287 992.3 921 59.4
CANSAT56G4370 Cannabis sativa HOM05D004019 ORTHO05D005136 2.5e-287 992.3 923 59.3
Ciclev10007225m.g Citrus clementina HOM05D004019 ORTHO05D005136 3.1e-285 985.3 913 59.0
TWI63G0705 Tripterygium wilfordii HOM05D004019 ORTHO05D005136 4.0e-285 984.9 920 57.2
COL.COLO4_18737 Corchorus olitorius HOM05D004019 ORTHO05D005136 4.0e-277 958.4 912 57.5
Thecc.09G037700 Theobroma cacao HOM05D004019 ORTHO05D005136 1.2e-276 956.8 912 57.5
Gorai.009G053000 Gossypium raimondii HOM05D004019 ORTHO05D005136 4.4e-276 954.9 913 56.8
Dinv14207 Davidia involucrata HOM05D004019 ORTHO05D005136 1.7e-275 953.0 910 58.5
Gohir.A05G049400 Gossypium hirsutum HOM05D004019 ORTHO05D005136 1.1e-274 950.3 912 56.6
TAR624G1332 Trochodendron aralioides HOM05D004019 ORTHO05D005136 1.0e-272 943.7 908 56.9
Potri.006G244900 Populus trichocarpa HOM05D004019 ORTHO05D005136 1.1e-271 940.3 927 57.1
Dinv30236 Davidia involucrata HOM05D004019 ORTHO05D005136 3.6e-270 935.3 909 57.1
CSS0034867 Camellia sinensis var. sinensis HOM05D004019 ORTHO05D005136 1.5e-260 903.3 909 54.9
QL12p030952 Quercus lobata HOM05D004019 ORTHO05D005136 1.8e-256 889.8 839 60.8
Sabra06G0191800 Salix brachista HOM05D004019 ORTHO05D005136 5.6e-255 884.8 993 52.7
Lj1g0020850 Lotus japonicus HOM05D004019 ORTHO05D005136 5.3e-253 878.2 908 54.7
Nn8g39221 Nelumbo nucifera HOM05D004019 ORTHO05D005136 6.9e-253 877.9 912 54.4
PGR031G1071 Punica granatum HOM05D004019 ORTHO05D005136 1.4e-250 870.2 909 52.3
GSVIVG01035749001 Vitis vinifera HOM05D004019 ORTHO05D005136 4.2e-250 868.6 908 53.5
arahy.Tifrunner.gnm1.ann1.P4KF2E Arachis hypogaea HOM05D004019 ORTHO05D005136 9.3e-250 867.5 916 53.7
arahy.Tifrunner.gnm1.ann1.WYF2AC Arachis hypogaea HOM05D004019 ORTHO05D005136 9.3e-250 867.5 916 53.9
Glyma.06G074700 Glycine max HOM05D004019 ORTHO05D005136 9.6e-247 857.4 909 53.9
Eucgr.C01572 Eucalyptus grandis HOM05D004019 ORTHO05D005136 2.1e-246 856.3 910 52.6
Ca_15687_v3 Cicer arietinum L. HOM05D004019 ORTHO05D005136 2.8e-246 855.9 914 53.8
Psat5g025600 Pisum sativum HOM05D004019 ORTHO05D005136 2.8e-246 855.9 908 53.1
Lalb_Chr11g0064021 Lupinus albus HOM05D004019 ORTHO05D005136 1.1e-245 854.0 907 54.5
THA.LOC104803772 Tarenaya hassleriana HOM05D004019 ORTHO05D005136 2.0e-244 849.7 919 52.2
CsaV3_3G046830 Cucumis sativus L. HOM05D004019 ORTHO05D005136 2.7e-241 839.3 915 52.1
TPR.G12417 Trifolium pratense HOM05D004019 ORTHO05D005136 1.8e-240 836.6 909 53.2
Sed0026885 Sechium edule HOM05D004019 ORTHO05D005136 6.9e-237 824.7 912 51.8
vmacro11102 Vaccinium macrocarpon HOM05D004019 ORTHO05D005136 1.6e-233 813.5 971 48.7
Rhsim02G0185100 Rhododendron simsii HOM05D004019 ORTHO05D005136 3.6e-233 812.4 912 50.7
Aqoxy7G01749 Aquilegia oxysepala HOM05D004019 ORTHO05D005136 2.3e-232 809.7 912 50.1
Actinidia13300 Actinidia chinensis HOM05D004019 ORTHO05D005136 1.1e-231 807.4 906 50.7
Medtr3g108360 Medicago truncatula HOM05D004019 ORTHO05D005136 1.1e-229 800.8 908 50.3
MBI03_g19627_MAGBIO Magnolia biondii HOM05D004019 ORTHO05D005136 1.4e-229 800.4 918 51.1
AL4G17350 Arabidopsis lyrata HOM05D004019 ORTHO05D005136 4.5e-228 795.4 908 49.2
AT2G25730 Arabidopsis thaliana HOM05D004019 ORTHO05D005136 1.0e-227 794.3 908 49.3
Aa31LG5G9950 Aethionema arabicum HOM05D004019 ORTHO05D005136 1.3e-227 793.9 908 49.4
Carub.0004s0550 Capsella rubella HOM05D004019 ORTHO05D005136 1.3e-227 793.9 909 49.1
Sp4g05330 Schrenkiella parvula HOM05D004019 ORTHO05D005136 2.6e-223 779.6 908 48.7
CARHR115530 Cardamine hirsuta HOM05D004019 ORTHO05D005136 3.2e-218 762.7 909 48.2
HanXRQChr17g0539391 Helianthus annuus HOM05D004019 ORTHO05D005136 7.2e-218 761.5 923 48.6
Lsat_1_v5_gn_3_27801 Lactuca sativa HOM05D004019 ORTHO05D005136 6.1e-217 758.4 957 48.7
PSO063G5962 Papaver somniferum HOM05D004019 ORTHO05D005136 5.7e-215 751.9 926 48.7
PSO782G0289 Papaver somniferum HOM05D004019 ORTHO05D005136 3.7e-214 749.2 933 49.0
ECA246G1280 Erigeron canadensis HOM05D004019 ORTHO05D005136 5.3e-213 745.3 939 47.5
Sopen08g021930 Solanum pennellii HOM05D004019 ORTHO05D005136 1.5e-210 737.3 908 47.1
BolC3t15586H Brassica oleracea HOM05D004019 ORTHO05D005136 2.8e-206 723.0 906 46.6
C03p32450 Brassica napus HOM05D004019 ORTHO05D005136 7.7e-204 714.9 906 46.2
Sc09g0008920 Simmondsia chinensis HOM05D004019 ORTHO05D005136 2.1e-201 706.8 908 46.3
BraA03t11915Z Brassica rapa HOM05D004019 ORTHO05D005136 2.7e-201 706.4 906 45.6
A03p27040 Brassica napus HOM05D004019 ORTHO05D005136 6.1e-201 705.3 906 45.4
ATR1120G055 Amborella trichopoda HOM05D004019 ORTHO05D005136 1.4e-200 704.1 920 45.0
Migut.A00257 Erythranthe guttata HOM05D004019 ORTHO05D005136 1.4e-200 704.1 912 45.2
MSTRG.25887 Avicennia marina HOM05D004019 ORTHO05D005136 1.5e-194 684.1 912 45.4
AUR62024824 Chenopodium quinoa HOM05D004019 ORTHO05D005136 1.2e-188 664.5 912 43.2
AUR62032391 Chenopodium quinoa HOM05D004019 ORTHO05D005136 2.9e-187 659.8 913 43.5
EL10Ac2g02527 Beta vulgaris HOM05D004019 ORTHO05D005136 3.8e-187 659.4 916 42.8
SGA_v2.0_scaffold280G46835 Striga asiatica HOM05D004019 ORTHO05D005136 5.6e-186 655.6 952 42.9
ClCG05G017320 Citrullus lanatus HOM05D004019 ORTHO05D005136 9.5e-186 654.8 777 48.1
Manes.03G064200 Manihot esculenta HOM05D004019 ORTHO05D005136 1.7e-182 644.0 595 59.5
SHI11647 Sapria himalayana HOM05D004019 ORTHO05D005136 1.1e-181 641.3 910 42.1
Ah.12g060350 Amaranthus hybridus HOM05D004019 ORTHO05D005136 1.1e-178 631.3 913 41.8
Cc08_g08140 Coffea canephora HOM05D004019 ORTHO05D005136 1.5e-175 620.9 720 48.5
Peaxi162Scf00105g00812 Petunia axillaris HOM05D004019 ORTHO05D005136 7.3e-170 602.1 768 45.1
Solyc08g068040.3 Solanum lycopersicum HOM05D004019 ORTHO05D005136 4.4e-167 592.8 768 45.6
HPP92_006442 Vanilla planifolia HOM05D004019 ORTHO05D005136 1.4e-165 587.8 910 40.5
Nitab4.5_0000250g0110 Nicotiana tabacum HOM05D004019 ORTHO05D005136 2.7e-164 583.6 936 40.4
Phvul.009G099400 Phaseolus vulgaris HOM05D004019 ORTHO05D005136 1.0e-163 581.6 598 55.0
Cpa.g.sc205.19 Carica papaya HOM05D004019 ORTHO05D005136 3.4e-159 566.6 588 54.4
Zm00001eb161040 Zea mays HOM05D004019 ORTHO05D005136 1.1e-152 545.0 909 38.4
Thhalv10000005m.g Eutrema salsugineum HOM05D004019 ORTHO05D005136 1.6e-145 521.2 595 48.9
Nitab4.5_0002393g0030 Nicotiana tabacum HOM05D004019 ORTHO05D005136 3.4e-143 513.5 585 49.4
DCAR_006255 Daucus carota HOM05D004019 ORTHO05D005136 5.6e-138 496.1 597 50.6
CDE10G0881 Ceratophyllum demersum HOM05D004019 ORTHO05D005136 8.4e-134 482.3 910 35.6
SalBow4G2655 Salvia bowleyana HOM05D004019 ORTHO05D005136 5.9e-119 433.0 584 44.9
SEGI_01785 Sequoiadendron giganteum HOM05D004019 ORTHO05D005136 1.8e-107 394.8 611 38.3
Hma1.2p1_0140F.1_g063760 Hydrangea macrophylla HOM05D004019 ORTHO05D005136 7.4e-98 362.8 401 52.4
Pp3c19_2530 Physcomitrium patens HOM05D004019 ORTHO05D005136 7.7e-95 352.8 1021 29.3
Cpa.g.sc205.16 Carica papaya HOM05D004019 ORTHO05D005136 9.4e-93 345.9 340 55.3
Mapoly0049s0060 Marchantia polymorpha HOM05D004019 ORTHO05D005136 1.3e-89 335.5 1125 27.1
MELO3C003655.2 Cucumis melo HOM05D004019 ORTHO05D005136 2.7e-71 274.6 224 62.9
unitig_747.g21874 Utricularia gibba HOM05D004019 ORTHO05D005136 5.4e-64 250.4 429 39.6
QL12p030977 Quercus lobata HOM05D004019 ORTHO05D005136 1.2e-58 232.6 142 84.5
DCAR_006254 Daucus carota HOM05D004019 ORTHO05D005136 3.4e-58 231.1 310 45.2
Cc00_g31360 Coffea canephora HOM05D004019 ORTHO05D005136 2.1e-52 211.8 314 40.1
Cc08_g08730 Coffea canephora HOM05D000021 ORTHO05D000010 6.2e-52 210.3 313 40.9
unitig_747.g21873 Utricularia gibba HOM05D004019 ORTHO05D005136 2.4e-48 198.4 313 39.3
SMO172G0089 Selaginella moellendorffii HOM05D004019 ORTHO05D005136 1.2e-44 186.0 937 24.4
CBR_g31401 Chara braunii HOM05D004019 ORTHO05D005136 5.4e-40 170.6 1011 25.4
Lj8C607G10 Lonicera japonica HOM05D004019 ORTHO05D005136 4.6e-39 167.5 140 62.9
PGR042G0250 Punica granatum HOM05D004019 ORTHO05D005136 4.0e-35 154.5 141 53.2
AagrBONN_evm.TU.Sc2ySwM_340.130 Anthoceros agrestis HOM05D004019 ORTHO05D005136 7.6e-34 150.2 978 23.3
Solyc08g068030.1 Solanum lycopersicum HOM05D004019 ORTHO05D005136 1.1e-32 146.4 144 55.6
Prupe.5G112400 Prunus persica HOM05D004019 ORTHO05D005136 9.6e-29 133.3 120 63.3
Oeu022768.1 Olea europaea HOM05D004019 ORTHO05D005136 1.6e-28 132.5 121 54.5
Prupe.5G099400 Prunus persica HOM05D004019 ORTHO05D005136 4.8e-20 104.4 71 71.8
FvH4_2g30421 Fragaria vesca HOM05D004019 ORTHO05D035788 1.5e-13 82.8 87 52.9
Cc08_g08790 Coffea canephora HOM05D004019 ORTHO05D005136 1.8e-11 75.9 58 60.3
Cc00_g28950 Coffea canephora HOM05D004019 ORTHO05D005136 1.5e-10 72.8 58 60.3


User provided reference genes

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