Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_21491 Corylus avellana HOM05D005830 ORTHO05D007212 4.7e-89 331.3 177 100.0
Cfa013122 Carpinus fangiana HOM05D005830 ORTHO05D007212 2.0e-76 289.3 165 94.5
CiPaw.07G225200 Carya illinoinensis HOM05D005830 ORTHO05D007212 7.6e-47 191.0 163 67.5
QL02p021141 Quercus lobata HOM05D005830 ORTHO05D007212 6.0e-44 181.4 165 66.1
CiPaw.08G009900 Carya illinoinensis HOM05D005830 ORTHO05D007212 5.6e-42 174.9 164 60.4
Prupe.1G483400 Prunus persica HOM05D005830 ORTHO05D007212 4.4e-39 165.2 166 52.4
Thecc.09G021700 Theobroma cacao HOM05D005830 ORTHO05D007212 2.5e-34 149.4 165 49.1
Gorai.009G059500 Gossypium raimondii HOM05D005830 ORTHO05D007212 7.3e-34 147.9 165 49.1
Gohir.D05G058400 Gossypium hirsutum HOM05D005830 ORTHO05D007212 9.6e-34 147.5 165 49.1
Medtr3g106630 Medicago truncatula HOM05D005830 ORTHO05D007212 6.2e-33 144.8 156 50.0
MD15G1128100 Malus domestica HOM05D005830 ORTHO05D007212 8.1e-33 144.4 166 47.0
RcHm_v2.0_Chr6g0297551 Rosa chinensis HOM05D005830 ORTHO05D007212 1.1e-32 144.1 165 46.7
Sabra06G0201100 Salix brachista HOM05D005830 ORTHO05D007212 2.4e-32 142.9 166 48.8
TAR625G0228 Trochodendron aralioides HOM05D005830 ORTHO05D007212 4.0e-32 142.1 158 50.0
TAR636G3280 Trochodendron aralioides HOM05D005830 ORTHO05D007212 4.0e-32 142.1 164 49.4
Manes.16G124200 Manihot esculenta HOM05D002641 ORTHO05D001537 6.9e-32 141.4 162 51.9
TPR.G3136 Trifolium pratense HOM05D005830 ORTHO05D007212 1.2e-31 140.6 157 50.3
COL.COLO4_18887 Corchorus olitorius HOM05D005830 ORTHO05D007212 1.5e-31 140.2 167 45.5
Ca_15753_v3 Cicer arietinum L. HOM05D005830 ORTHO05D007212 2.2e-30 136.3 162 47.5
Lalb_Chr11g0063651 Lupinus albus HOM05D005830 ORTHO05D007212 2.9e-30 136.0 164 44.5
vmacro05164 Vaccinium macrocarpon HOM05D005830 ORTHO05D007212 3.8e-30 135.6 165 44.8
Nn2g12145 Nelumbo nucifera HOM05D005830 ORTHO05D007212 1.4e-29 133.7 165 46.1
Potri.006G256900 Populus trichocarpa HOM05D005830 ORTHO05D007212 1.4e-29 133.7 166 47.6
Dinv05006 Davidia involucrata HOM05D005830 ORTHO05D007212 1.9e-29 133.3 165 46.7
Psat5g029840 Pisum sativum HOM05D005830 ORTHO05D007212 5.4e-29 131.7 156 46.2
Nn8g39584 Nelumbo nucifera HOM05D005830 ORTHO05D007212 7.9e-28 127.9 164 44.5
Rhsim07G0159800 Rhododendron simsii HOM05D005830 ORTHO05D007212 7.9e-28 127.9 161 43.5
Lj1g0023135 Lotus japonicus HOM05D005830 ORTHO05D007212 1.0e-27 127.5 154 48.7
FvH4_2g28800 Fragaria vesca HOM05D005830 ORTHO05D007212 2.3e-27 126.3 162 40.1
FAN15G2262 Fragaria x ananassa HOM05D005830 ORTHO05D007212 2.3e-27 126.3 162 40.1
FAN24G0474 Fragaria x ananassa HOM05D005830 ORTHO05D007212 2.3e-27 126.3 162 40.1
FAN27G1157 Fragaria x ananassa HOM05D005830 ORTHO05D007212 3.9e-27 125.6 157 40.8
Aqoxy7G03615 Aquilegia oxysepala HOM05D005830 ORTHO05D007212 1.1e-26 124.0 165 44.2
Ciclev10010445m.g Citrus clementina HOM05D005830 ORTHO05D007212 1.5e-26 123.6 160 46.2
FAN20G1042 Fragaria x ananassa HOM05D005830 ORTHO05D007212 1.9e-26 123.2 162 38.9
TWI63G1326 Tripterygium wilfordii HOM05D005830 ORTHO05D007212 3.3e-26 122.5 168 41.1
Sed0009357 Sechium edule HOM05D005830 ORTHO05D007212 7.4e-26 121.3 155 43.2
ClCG06G011670 Citrullus lanatus HOM05D005830 ORTHO05D007212 9.6e-26 120.9 166 41.0
Aqoxy4G01850 Aquilegia oxysepala HOM05D005830 ORTHO05D007212 3.7e-25 119.0 165 41.8
Eucgr.C02754 Eucalyptus grandis HOM05D005830 ORTHO05D007212 4.8e-25 118.6 161 41.0
AUR62013287 Chenopodium quinoa HOM05D005830 ORTHO05D007212 6.2e-25 118.2 172 43.6
Manes.06G045500 Manihot esculenta HOM05D005830 ORTHO05D007212 6.2e-25 118.2 166 40.4
Ah.09g224370 Amaranthus hybridus HOM05D005830 ORTHO05D007212 8.1e-25 117.9 171 40.4
GSVIVG01012831001 Vitis vinifera HOM05D005830 ORTHO05D007212 8.1e-25 117.9 156 42.3
Dinv36464 Davidia involucrata HOM05D005830 ORTHO05D007212 1.1e-24 117.5 172 39.5
MELO3C010295.2 Cucumis melo HOM05D005830 ORTHO05D007212 1.4e-24 117.1 166 42.2
Phvul.009G091500 Phaseolus vulgaris HOM05D005830 ORTHO05D007212 1.8e-24 116.7 160 43.8
Thecc.09G135000 Theobroma cacao HOM05D005830 ORTHO05D007212 1.8e-24 116.7 166 39.8
CiPaw.03G250100 Carya illinoinensis HOM05D005830 ORTHO05D007212 2.4e-24 116.3 168 41.1
CsaV3_1G027980 Cucumis sativus L. HOM05D005830 ORTHO05D007212 2.4e-24 116.3 166 41.0
COL.COLO4_15558 Corchorus olitorius HOM05D005830 ORTHO05D007212 6.9e-24 114.8 155 40.6
VMungo1309G0557 Vigna mungo HOM05D005830 ORTHO05D007212 9.0e-24 114.4 160 45.6
Glyma.04G065400 Glycine max HOM05D005830 ORTHO05D007212 2.6e-23 112.8 158 44.3
vmacro06159 Vaccinium macrocarpon HOM05D005830 ORTHO05D007212 3.4e-23 112.5 163 39.3
Actinidia26367 Actinidia chinensis HOM05D005830 ORTHO05D007212 4.5e-23 112.1 171 38.0
CiPaw.04G176400 Carya illinoinensis HOM05D005830 ORTHO05D007212 5.8e-23 111.7 157 41.4
Dinv41459 Davidia involucrata HOM05D005830 ORTHO05D007212 5.8e-23 111.7 164 40.2
Manes.14G117500 Manihot esculenta HOM05D005830 ORTHO05D007212 5.8e-23 111.7 155 40.0
MD02G1021100 Malus domestica HOM05D005830 ORTHO05D007212 7.6e-23 111.3 166 39.2
Ciclev10008496m.g Citrus clementina HOM05D005830 ORTHO05D007212 1.0e-22 110.9 170 40.6
Sabra06G0046300 Salix brachista HOM05D005830 ORTHO05D007212 1.0e-22 110.9 167 38.9
Hma1.2p1_0497F.1_g166530 Hydrangea macrophylla HOM05D005830 ORTHO05D007212 1.7e-22 110.2 170 37.1
Atru.chr7.1975 Acer truncatum HOM05D005830 ORTHO05D007212 2.2e-22 109.8 169 38.5
EL10Ac8g18756 Beta vulgaris HOM05D005830 ORTHO05D007212 2.2e-22 109.8 172 41.9
QL02p090253 Quercus lobata HOM05D005830 ORTHO05D007212 2.2e-22 109.8 169 37.9
Cfa002293 Carpinus fangiana HOM05D005830 ORTHO05D007212 4.9e-22 108.6 171 38.0
Duzib150G0784 Durio zibethinus HOM05D005830 ORTHO05D007212 4.9e-22 108.6 166 37.3
Gohir.A05G013800 Gossypium hirsutum HOM05D005830 ORTHO05D007212 1.1e-21 107.5 166 38.0
Cpa.g.sc46.60 Carica papaya HOM05D005830 ORTHO05D007212 2.5e-21 106.3 156 39.7
Potri.006G063600 Populus trichocarpa HOM05D005830 ORTHO05D007212 2.5e-21 106.3 167 37.7
Prupe.7G250400 Prunus persica HOM05D005830 ORTHO05D007212 2.5e-21 106.3 167 39.5
Gohir.D05G014900 Gossypium hirsutum HOM05D005830 ORTHO05D007212 3.2e-21 105.9 166 37.3
Gorai.009G015000 Gossypium raimondii HOM05D005830 ORTHO05D007212 3.2e-21 105.9 166 37.3
FAN23G1789 Fragaria x ananassa HOM05D005830 ORTHO05D007212 7.1e-21 104.8 166 37.3
CANSAT11G0221 Cannabis sativa HOM05D005830 ORTHO05D007212 1.6e-20 103.6 166 38.6
FAN28G1643 Fragaria x ananassa HOM05D005830 ORTHO05D007212 1.6e-20 103.6 166 37.3
MBI14_g38128_MAGBIO Magnolia biondii HOM05D005830 ORTHO05D007212 1.6e-20 103.6 162 43.2
Haze_25480 Corylus avellana HOM05D005830 ORTHO05D007212 2.1e-20 103.2 171 36.3
MD15G1164200 Malus domestica HOM05D005830 ORTHO05D007212 2.7e-20 102.8 166 38.6
Lj9A701G52 Lonicera japonica HOM05D005830 ORTHO05D007212 3.5e-20 102.4 168 36.3
FvH4_1g02430 Fragaria vesca HOM05D005830 ORTHO05D007212 6.0e-20 101.7 166 36.7
FAN19G1317 Fragaria x ananassa HOM05D005830 ORTHO05D007212 6.0e-20 101.7 166 36.7
Potri.018G123400 Populus trichocarpa HOM05D005830 ORTHO05D007212 1.3e-19 100.5 167 37.1
Sc08g0006200 Simmondsia chinensis HOM05D005830 ORTHO05D007212 1.3e-19 100.5 173 36.4
RcHm_v2.0_Chr2g0087391 Rosa chinensis HOM05D005830 ORTHO05D007212 1.8e-19 100.1 158 38.6
Sabra18G0105100 Salix brachista HOM05D005830 ORTHO05D007212 1.8e-19 100.1 167 37.7
Nitab4.5_0002267g0050 Nicotiana tabacum HOM05D005830 ORTHO05D007212 3.9e-19 99.0 171 34.5
Nitab4.5_0000704g0010 Nicotiana tabacum HOM05D005830 ORTHO05D007212 1.1e-18 97.4 176 35.8
DCAR_020892 Daucus carota HOM05D005830 ORTHO05D007212 7.4e-18 94.7 158 33.5
Eucgr.C00582 Eucalyptus grandis HOM05D005830 ORTHO05D007212 9.6e-18 94.4 158 39.2
Lsat_1_v5_gn_5_93541 Lactuca sativa HOM05D005830 ORTHO05D007212 4.8e-17 92.0 170 34.7
QL08p064688 Quercus lobata HOM05D005830 ORTHO05D007212 1.8e-16 90.1 144 38.2
AUR62011200 Chenopodium quinoa HOM05D005830 ORTHO05D007212 3.1e-16 89.4 172 36.6
HanXRQChr12g0356861 Helianthus annuus HOM05D005830 ORTHO05D007212 3.1e-16 89.4 170 32.9
Actinidia14593 Actinidia chinensis HOM05D000485 ORTHO05D000341 4.1e-16 89.0 126 39.7
arahy.Tifrunner.gnm1.ann1.N1L3G9 Arachis hypogaea HOM05D005830 ORTHO05D007212 5.3e-16 88.6 158 35.4
Lalb_Chr13g0301421 Lupinus albus HOM05D005830 ORTHO05D007212 3.4e-15 85.9 171 36.3
Sc06g0000560 Simmondsia chinensis HOM05D005830 ORTHO05D007212 5.8e-15 85.1 150 34.0
Oeu052743.1 Olea europaea HOM05D005830 ORTHO05D007212 1.0e-14 84.3 183 31.1
Peaxi162Scf00088g00106 Petunia axillaris HOM05D005830 ORTHO05D007212 1.7e-14 83.6 181 32.6
HanXRQChr10g0314411 Helianthus annuus HOM05D005830 ORTHO05D007212 2.9e-14 82.8 158 32.9
Lj7P437T13 Lonicera japonica HOM05D005830 ORTHO05D007212 2.9e-14 82.8 158 32.9
PGR142G1093 Punica granatum HOM05D005830 ORTHO05D007212 6.5e-14 81.6 156 33.3
Lj4g0000922 Lotus japonicus HOM05D005830 ORTHO05D007212 1.4e-13 80.5 154 37.0
Cc06_g07840 Coffea canephora HOM05D005830 ORTHO05D007212 6.1e-12 75.1 170 31.8
Ca_21656_v3 Cicer arietinum L. HOM05D005830 ORTHO05D007212 1.0e-11 74.3 165 30.9
TPR.G956 Trifolium pratense HOM05D005830 ORTHO05D007212 1.8e-11 73.6 154 31.8
Phvul.003G170800 Phaseolus vulgaris HOM05D005830 ORTHO05D007212 2.3e-11 73.2 155 35.5
VMungo1215G0722 Vigna mungo HOM05D005830 ORTHO05D007212 2.3e-11 73.2 163 32.5
ATR0800G042 Amborella trichopoda HOM05D005830 ORTHO05D007212 8.7e-11 71.2 153 34.0
AUR62012424 Chenopodium quinoa HOM05D005830 ORTHO05D007212 1.1e-10 70.9 121 33.1
Solyc07g007660.1 Solanum lycopersicum HOM05D005830 ORTHO05D007212 1.5e-10 70.5 118 37.3
Sopen07g003650 Solanum pennellii HOM05D005830 ORTHO05D007212 1.5e-10 70.5 118 37.3
CAN.G1382.7 Capsicum annuum HOM05D005830 ORTHO05D007212 1.9e-10 70.1 134 33.6
Glyma.17G109300 Glycine max HOM05D005830 ORTHO05D007212 4.3e-10 68.9 166 32.5
MSTRG.10652 Avicennia marina HOM05D005830 ORTHO05D007212 9.7e-10 67.8 170 29.4
PGSC0003DMG400030680 Solanum tuberosum HOM05D005830 ORTHO05D007212 9.7e-10 67.8 118 35.6
Oeu056965.1 Olea europaea HOM05D005830 ORTHO05D007212 9.0e-08 61.2 128 30.5
EL10Ac2g04187 Beta vulgaris HOM05D005830 ORTHO05D007212 2.2e-06 56.6 56 44.6
Psat4g036280 Pisum sativum HOM05D005830 ORTHO05D007212 2.2e-06 56.6 156 28.8
Medtr4g115690 Medicago truncatula HOM05D005830 ORTHO05D007212 2.9e-06 56.2 129 29.5
Ah.16g104630 Amaranthus hybridus HOM05D000524 ORTHO05D000381 6.5e-06 55.1 52 48.1


User provided reference genes

Program Settings