Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_21352 Corylus avellana HOM05D006246 ORTHO05D007932 3.1e-36 155.2 118 100.0
Haze_21346 Corylus avellana HOM05D006246 ORTHO05D007932 1.3e-34 149.8 118 98.3
Cfa012983 Carpinus fangiana HOM05D006246 ORTHO05D007932 6.6e-31 137.5 118 89.8
FAN18G0928 Fragaria x ananassa HOM05D006246 ORTHO05D007932 1.2e-16 90.1 74 66.2
Atru.chr13.2337 Acer truncatum HOM05D006246 ORTHO05D007932 4.6e-16 88.2 73 67.1
THA.LOC104826210 Tarenaya hassleriana HOM05D006246 ORTHO05D007932 7.9e-16 87.4 73 65.8
Atru.chr3.3065 Acer truncatum HOM05D006246 ORTHO05D007932 1.0e-15 87.0 82 62.2
Carub.0004s1261 Capsella rubella HOM05D006246 ORTHO05D007932 3.9e-15 85.1 73 63.0
CARHR124920 Cardamine hirsuta HOM05D006246 ORTHO05D007932 3.9e-15 85.1 73 63.0
Lalb_Chr01g0009371 Lupinus albus HOM05D006246 ORTHO05D007932 3.9e-15 85.1 84 56.0
Sp4g13780 Schrenkiella parvula HOM05D006246 ORTHO05D007932 3.9e-15 85.1 73 63.0
THA.LOC104800880 Tarenaya hassleriana HOM05D006246 ORTHO05D007932 3.9e-15 85.1 73 63.0
Thhalv10017462m.g Eutrema salsugineum HOM05D006246 ORTHO05D007932 5.1e-15 84.7 73 63.0
TWI14G1413 Tripterygium wilfordii HOM05D006246 ORTHO05D007932 5.1e-15 84.7 75 58.7
Cpa.g.sc49.43 Carica papaya HOM05D006246 ORTHO05D007932 1.1e-14 83.6 82 63.4
BcaC02g11223 Brassica carinata HOM05D006246 ORTHO05D007932 1.5e-14 83.2 73 61.6
BolC4t23440H Brassica oleracea HOM05D006246 ORTHO05D007932 1.5e-14 83.2 73 61.6
Aa31LG5G5660 Aethionema arabicum HOM05D006246 ORTHO05D007932 1.9e-14 82.8 73 61.6
BcaB02g10382 Brassica carinata HOM05D006246 ORTHO05D007932 1.9e-14 82.8 74 60.8
A05p14300 Brassica napus HOM05D006246 ORTHO05D007932 1.9e-14 82.8 79 58.2
Ciclev10002937m.g Citrus clementina HOM05D006246 ORTHO05D007932 1.9e-14 82.8 80 58.8
Psat6g198440 Pisum sativum HOM05D006246 ORTHO05D007932 1.9e-14 82.8 83 71.1
Phvul.009G159900 Phaseolus vulgaris HOM05D006246 ORTHO05D007932 3.3e-14 82.0 83 71.1
Sp1g40730 Schrenkiella parvula HOM05D006246 ORTHO05D007932 3.3e-14 82.0 73 61.6
TWI59G0384 Tripterygium wilfordii HOM05D006246 ORTHO05D007932 3.3e-14 82.0 85 55.3
Lalb_Chr03g0034581 Lupinus albus HOM05D006246 ORTHO05D007932 4.3e-14 81.6 85 63.5
QL02p028696 Quercus lobata HOM05D006246 ORTHO05D007932 5.6e-14 81.3 91 69.2
FvH4_5g18370 Fragaria vesca HOM05D006246 ORTHO05D007932 7.4e-14 80.9 43 88.4
FAN08G0289 Fragaria x ananassa HOM05D006246 ORTHO05D007932 7.4e-14 80.9 43 88.4
FAN13G0403 Fragaria x ananassa HOM05D006246 ORTHO05D007932 7.4e-14 80.9 43 88.4
Medtr1g101240 Medicago truncatula HOM05D006246 ORTHO05D007932 1.3e-13 80.1 84 69.0
Carub.0002s2226 Capsella rubella HOM05D006246 ORTHO05D007932 1.6e-13 79.7 80 55.0
DCAR_027686 Daucus carota HOM05D006246 ORTHO05D007932 1.6e-13 79.7 78 73.1
SHI11488 Sapria himalayana HOM05D006246 ORTHO05D007932 1.6e-13 79.7 72 61.1
Glyma.06G161300 Glycine max HOM05D006246 ORTHO05D007932 2.8e-13 79.0 83 71.1
Ca_00010_v3 Cicer arietinum L. HOM05D006246 ORTHO05D007932 8.1e-13 77.4 43 86.0
Ca_00013_v3 Cicer arietinum L. HOM05D006246 ORTHO05D007932 8.1e-13 77.4 43 86.0
Sc23g0001630 Simmondsia chinensis HOM05D006246 ORTHO05D007932 8.1e-13 77.4 42 85.7
Migut.N03358 Erythranthe guttata HOM05D006246 ORTHO05D007932 1.1e-12 77.0 43 86.0
Glyma.04G204100 Glycine max HOM05D006246 ORTHO05D007932 1.1e-12 77.0 84 67.9
Actinidia30538 Actinidia chinensis HOM05D006246 ORTHO05D007932 1.8e-12 76.3 43 83.7
TPR.G26967 Trifolium pratense HOM05D006246 ORTHO05D007932 1.8e-12 76.3 43 83.7
Lj5g0026305 Lotus japonicus HOM05D006246 ORTHO05D007932 3.1e-12 75.5 89 66.3
Potri.007G101900 Populus trichocarpa HOM05D006246 ORTHO05D007932 3.1e-12 75.5 42 85.7
CSS0014325 Camellia sinensis var. sinensis HOM05D006246 ORTHO05D007932 4.0e-12 75.1 36 88.9
Potri.005G067400 Populus trichocarpa HOM05D006246 ORTHO05D007932 5.3e-12 74.7 43 81.4
SalBow8G1996 Salvia bowleyana HOM05D006246 ORTHO05D007932 5.3e-12 74.7 43 83.7
SGA_v2.0_scaffold118G32544 Striga asiatica HOM05D006246 ORTHO05D007932 5.3e-12 74.7 43 83.7
SGA_v2.0_scaffold24G10594 Striga asiatica HOM05D006246 ORTHO05D007932 5.3e-12 74.7 43 83.7
Eucgr.I02713 Eucalyptus grandis HOM05D006246 ORTHO05D007932 6.9e-12 74.3 46 78.3
HanXRQChr11g0322351 Helianthus annuus HOM05D006246 ORTHO05D007932 9.0e-12 73.9 36 86.1
A05p14510 Brassica napus HOM05D006246 ORTHO05D007932 1.2e-11 73.6 62 82.3
CDE02G3719 Ceratophyllum demersum HOM05D006246 ORTHO05D007932 1.5e-11 73.2 85 48.2
Oeu021218.1 Olea europaea HOM05D006246 ORTHO05D007932 1.5e-11 73.2 75 53.3
Sabra07G0084000 Salix brachista HOM05D006246 ORTHO05D007932 1.5e-11 73.2 41 82.9
TPR.G20664 Trifolium pratense HOM05D006246 ORTHO05D007932 1.5e-11 73.2 41 82.9
COL.COLO4_29720 Corchorus olitorius HOM05D006246 ORTHO05D007932 2.0e-11 72.8 43 81.4
MBI03_g07695_MAGBIO Magnolia biondii HOM05D006246 ORTHO05D007932 2.0e-11 72.8 41 80.5
Duzib106G0997 Durio zibethinus HOM05D006246 ORTHO05D007932 2.6e-11 72.4 43 79.1
Thecc.03G070200 Theobroma cacao HOM05D006246 ORTHO05D007932 2.6e-11 72.4 43 79.1
TWI23G1247 Tripterygium wilfordii HOM05D006246 ORTHO05D007932 2.6e-11 72.4 78 71.8
HPP92_026670 Vanilla planifolia HOM05D006246 ORTHO05D007932 2.6e-11 72.4 80 51.2
Gohir.A05G293700 Gossypium hirsutum HOM05D006246 ORTHO05D007932 3.4e-11 72.0 43 79.1
Gohir.A05G410500 Gossypium hirsutum HOM05D006246 ORTHO05D007932 3.4e-11 72.0 41 85.4
Gohir.D05G294400 Gossypium hirsutum HOM05D006246 ORTHO05D007932 3.4e-11 72.0 43 79.1
Gorai.009G310900 Gossypium raimondii HOM05D006246 ORTHO05D007932 3.4e-11 72.0 43 79.1
Sabra05G0055400 Salix brachista HOM05D006246 ORTHO05D007932 3.4e-11 72.0 43 79.1
Aqoxy7G03540 Aquilegia oxysepala HOM05D006246 ORTHO05D007932 4.5e-11 71.6 44 77.3
arahy.Tifrunner.gnm1.ann1.V9PSGM Arachis hypogaea HOM05D006246 ORTHO05D007932 4.5e-11 71.6 42 78.6
BraA05t20382Z Brassica rapa HOM05D006246 ORTHO05D007932 4.5e-11 71.6 62 80.6
CDE09G0543 Ceratophyllum demersum HOM05D000196 ORTHO05D000279 4.5e-11 71.6 85 47.1
Medtr7g085440 Medicago truncatula HOM05D006246 ORTHO05D007932 5.8e-11 71.2 83 63.9
vmacro01162 Vaccinium macrocarpon HOM05D006246 ORTHO05D007932 5.8e-11 71.2 33 90.9
Duzib114G0955 Durio zibethinus HOM05D006246 ORTHO05D007932 7.6e-11 70.9 43 76.7
Migut.C01275 Erythranthe guttata HOM05D006246 ORTHO05D007932 7.6e-11 70.9 43 79.1
TAR636G3186 Trochodendron aralioides HOM05D006246 ORTHO05D007932 7.6e-11 70.9 34 88.2
Sed0027909 Sechium edule HOM05D006246 ORTHO05D007932 9.9e-11 70.5 87 64.4
Duzib128G0188 Durio zibethinus HOM05D006246 ORTHO05D007932 1.7e-10 69.7 35 85.7
FAN04G2944 Fragaria x ananassa HOM05D006246 ORTHO05D007932 1.7e-10 69.7 41 85.4
MD06G1239400 Malus domestica HOM05D006246 ORTHO05D007932 1.7e-10 69.7 34 85.3
Sed0011737 Sechium edule HOM05D006246 ORTHO05D007932 1.7e-10 69.7 33 87.9
Actinidia08157 Actinidia chinensis HOM05D006246 ORTHO05D007932 2.9e-10 68.9 36 77.8
Os04g0295000 Oryza sativa ssp. japonica HOM05D006246 ORTHO05D007932 2.9e-10 68.9 76 67.1
PSO170G6052 Papaver somniferum HOM05D006246 ORTHO05D007932 3.8e-10 68.6 43 74.4
PSO782G0303 Papaver somniferum HOM05D006246 ORTHO05D007932 3.8e-10 68.6 43 74.4
Cc05_g03280 Coffea canephora HOM05D006246 ORTHO05D007932 6.4e-10 67.8 34 85.3
Os05g0270400 Oryza sativa ssp. japonica HOM05D006246 ORTHO05D007932 1.1e-09 67.0 78 67.9
Zm00001eb059790 Zea mays HOM05D006246 ORTHO05D007932 3.2e-09 65.5 42 71.4
CANSAT01G1683 Cannabis sativa HOM05D006246 ORTHO05D007932 5.5e-09 64.7 70 71.4
CAN.G1647.5 Capsicum annuum HOM05D006246 ORTHO05D007932 7.1e-09 64.3 35 77.1
Ah.05g178740 Amaranthus hybridus HOM05D006246 ORTHO05D007932 1.2e-08 63.5 33 78.8
CARHR068770 Cardamine hirsuta HOM05D006246 ORTHO05D007932 2.7e-08 62.4 47 66.0
Nitab4.5_0000365g0140 Nicotiana tabacum HOM05D006246 ORTHO05D007932 3.5e-08 62.0 34 76.5
Nitab4.5_0001579g0010 Nicotiana tabacum HOM05D006246 ORTHO05D007932 3.5e-08 62.0 34 73.5
AagrBONN_evm.TU.Sc2ySwM_344.1565 Anthoceros agrestis HOM05D006246 ORTHO05D007932 1.3e-07 60.1 41 65.9
Gohir.A05G410100 Gossypium hirsutum HOM05D006246 ORTHO05D007932 3.9e-07 58.5 35 82.9
BcaB06g28525 Brassica carinata HOM05D006246 ORTHO05D007932 5.1e-07 58.2 76 47.4
BolC4t27573H Brassica oleracea HOM05D006246 ORTHO05D007932 5.1e-07 58.2 76 47.4
Mapoly0071s0091 Marchantia polymorpha HOM05D006246 ORTHO05D007932 5.1e-07 58.2 85 37.6
Sc26g0000490 Simmondsia chinensis HOM05D006246 ORTHO05D007932 1.5e-06 56.6 41 68.3
AT2G31305 Arabidopsis thaliana HOM05D006246 ORTHO05D007932 9.6e-06 53.9 57 57.9


User provided reference genes

Program Settings