Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_21294 Corylus avellana HOM05D007628 ORTHO05D007342 8.7e-41 169.9 85 100.0
FAN14G5279 Fragaria x ananassa HOM05D007628 ORTHO05D007342 8.2e-15 83.6 87 55.2
FvH4_6g07490 Fragaria vesca HOM05D007628 ORTHO05D007342 1.1e-14 83.2 86 55.8
Prupe.1G552700 Prunus persica HOM05D007628 ORTHO05D007342 6.9e-14 80.5 85 50.6
FvH4_5g32140 Fragaria vesca HOM05D007628 ORTHO05D007342 3.4e-13 78.2 86 51.2
FAN18G2608 Fragaria x ananassa HOM05D007628 ORTHO05D007342 3.4e-13 78.2 86 51.2
Lj4g0016425 Lotus japonicus HOM05D007628 ORTHO05D007342 4.5e-13 77.8 81 51.9
FvH4_5g32180 Fragaria vesca HOM05D007628 ORTHO05D007342 5.9e-13 77.4 85 52.9
FAN08G3537 Fragaria x ananassa HOM05D007628 ORTHO05D007342 1.0e-12 76.6 86 51.2
Psat7g225920 Pisum sativum HOM05D007628 ORTHO05D007342 5.0e-12 74.3 80 51.2
Cc00_g22140 Coffea canephora HOM05D007628 ORTHO05D007342 8.5e-12 73.6 82 50.0
FAN08G2431 Fragaria x ananassa HOM05D007628 ORTHO05D007342 1.9e-11 72.4 85 50.6
TPR.G34119 Trifolium pratense HOM05D007628 ORTHO05D007342 2.5e-11 72.0 80 48.8
FAN08G0137 Fragaria x ananassa HOM05D007628 ORTHO05D007342 3.2e-11 71.6 84 45.2
FAN08G3446 Fragaria x ananassa HOM05D007628 ORTHO05D007342 3.2e-11 71.6 84 45.2
RcHm_v2.0_Chr7g0228201 Rosa chinensis HOM05D007628 ORTHO05D007342 4.2e-11 71.2 86 51.2
Cc10_g10210 Coffea canephora HOM05D007628 ORTHO05D007342 9.4e-11 70.1 82 47.6
Psat7g225960 Pisum sativum HOM05D007628 ORTHO05D007342 1.6e-10 69.3 80 46.2
Psat7g226000 Pisum sativum HOM05D007628 ORTHO05D007342 2.1e-10 68.9 78 50.0
Eucgr.F03003 Eucalyptus grandis HOM05D007628 ORTHO05D007342 4.6e-10 67.8 71 50.7
Psat7g225880 Pisum sativum HOM05D007628 ORTHO05D007342 4.6e-10 67.8 77 50.6
Lj4g0001077 Lotus japonicus HOM05D007628 ORTHO05D007342 6.1e-10 67.4 80 48.8
Lalb_Chr25g0283251 Lupinus albus HOM05D007628 ORTHO05D007342 6.1e-10 67.4 79 48.1
TPR.G34100 Trifolium pratense HOM05D007628 ORTHO05D007342 1.4e-09 66.2 79 50.6
Medtr4g032865 Medicago truncatula HOM05D007628 ORTHO05D007342 2.3e-09 65.5 79 48.1
arahy.Tifrunner.gnm1.ann1.GT4ITC Arachis hypogaea HOM05D007628 ORTHO05D007342 3.0e-09 65.1 82 47.6
Migut.C01297 Erythranthe guttata HOM05D007628 ORTHO05D007342 3.0e-09 65.1 85 45.9
TPR.G34134 Trifolium pratense HOM05D007628 ORTHO05D007342 3.0e-09 65.1 79 45.6
CSS0040221 Camellia sinensis var. sinensis HOM05D007628 ORTHO05D007342 3.9e-09 64.7 78 48.7
CSS0048807 Camellia sinensis var. sinensis HOM05D007628 ORTHO05D007342 5.1e-09 64.3 74 47.3
arahy.Tifrunner.gnm1.ann1.L82REB Arachis hypogaea HOM05D007628 ORTHO05D007342 1.1e-08 63.2 80 46.2
FvH4_5g32170 Fragaria vesca HOM05D007628 ORTHO05D007342 1.1e-08 63.2 74 45.9
CSS0007364 Camellia sinensis var. sinensis HOM05D007628 ORTHO05D007342 2.5e-08 62.0 78 47.4
QL02p025803 Quercus lobata HOM05D007628 ORTHO05D007342 2.5e-08 62.0 70 51.4
Sc01g0001910 Simmondsia chinensis HOM05D007628 ORTHO05D007342 3.3e-08 61.6 80 45.0
arahy.Tifrunner.gnm1.ann1.UI0JR9 Arachis hypogaea HOM05D007628 ORTHO05D007342 4.3e-08 61.2 84 46.4
Rhsim06G0114400 Rhododendron simsii HOM05D007628 ORTHO05D007342 5.7e-08 60.8 79 43.0
CAN.G308.48 Capsicum annuum HOM05D007628 ORTHO05D007342 7.4e-08 60.5 58 50.0
Haze_21289 Corylus avellana HOM05D017027 ORTHO05D007342 1.3e-07 59.7 67 49.3
CAN.G508.19 Capsicum annuum HOM05D008200 ORTHO05D007342 1.7e-07 59.3 82 43.9
Lalb_Chr20g0108111 Lupinus albus HOM05D007628 ORTHO05D007342 1.7e-07 59.3 81 45.7
arahy.Tifrunner.gnm1.ann1.I9AMSX Arachis hypogaea HOM05D007628 ORTHO05D007342 2.8e-07 58.5 84 45.2
SalBow7G2761 Salvia bowleyana HOM05D007628 ORTHO05D007342 3.7e-07 58.2 58 55.2
TPR.G34171 Trifolium pratense HOM05D007628 ORTHO05D007342 2.4e-06 55.5 70 47.1
Lalb_Chr01g0016231 Lupinus albus HOM05D007628 ORTHO05D007342 3.1e-06 55.1 59 50.8
Rhsim06G0114500 Rhododendron simsii HOM05D007628 ORTHO05D007342 3.1e-06 55.1 79 39.2


User provided reference genes

Program Settings