Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_21197 Corylus avellana HOM05D006830 ORTHO05D008119 5.4e-180 634.8 486 100.0
Cfa017009 Carpinus fangiana HOM05D006830 ORTHO05D008119 3.0e-122 443.0 424 89.4
QL07p031724 Quercus lobata HOM05D006830 ORTHO05D008119 2.5e-84 317.0 536 60.8
GSVIVG01025871001 Vitis vinifera HOM05D006830 ORTHO05D008119 4.6e-70 269.6 487 60.0
TWI77G0580 Tripterygium wilfordii HOM05D006830 ORTHO05D008119 2.2e-56 224.2 484 52.1
TWI74G0093 Tripterygium wilfordii HOM05D006830 ORTHO05D008119 8.4e-56 222.2 484 49.4
MD12G1191100 Malus domestica HOM05D006830 ORTHO05D008119 4.8e-51 206.5 256 52.7
Prupe.6G296200 Prunus persica HOM05D006830 ORTHO05D008119 6.9e-50 202.6 257 51.4
RcHm_v2.0_Chr3g0460131 Rosa chinensis HOM05D006830 ORTHO05D008119 2.1e-46 191.0 268 48.1
Lj1g0026994 Lotus japonicus HOM05D006830 ORTHO05D008119 7.9e-46 189.1 259 51.4
Manes.08G169600 Manihot esculenta HOM05D006830 ORTHO05D008119 3.9e-45 186.8 258 50.0
FvH4_6g09531 Fragaria vesca HOM05D006830 ORTHO05D008119 1.9e-44 184.5 268 48.1
FAN14G4211 Fragaria x ananassa HOM05D006830 ORTHO05D008119 1.9e-44 184.5 268 48.1
Thecc.04G149300 Theobroma cacao HOM05D006830 ORTHO05D008119 7.4e-44 182.6 253 49.8
FAN05G1111 Fragaria x ananassa HOM05D006830 ORTHO05D008119 9.7e-44 182.2 268 48.5
FAN09G0658 Fragaria x ananassa HOM05D006830 ORTHO05D008119 1.3e-43 181.8 268 48.1
TAR636G3618 Trochodendron aralioides HOM05D006830 ORTHO05D008119 2.2e-43 181.0 495 48.1
Lj2A57T75 Lonicera japonica HOM05D006830 ORTHO05D008119 3.1e-42 177.2 499 38.9
Dinv16956 Davidia involucrata HOM05D006830 ORTHO05D008119 1.5e-41 174.9 529 46.7
Potri.006G110400 Populus trichocarpa HOM05D006830 ORTHO05D008119 5.9e-41 172.9 254 47.6
arahy.Tifrunner.gnm1.ann1.E2XN58 Arachis hypogaea HOM05D006830 ORTHO05D008119 1.0e-40 172.2 259 46.3
Actinidia29020 Actinidia chinensis HOM05D006830 ORTHO05D008119 3.2e-39 167.2 528 33.3
Eucgr.A00784 Eucalyptus grandis HOM05D006830 ORTHO05D008119 4.2e-39 166.8 250 45.2
PGR031G0539 Punica granatum HOM05D006830 ORTHO05D008119 4.2e-39 166.8 469 45.8
arahy.Tifrunner.gnm1.ann1.QV5EPW Arachis hypogaea HOM05D006830 ORTHO05D008119 3.6e-38 163.7 259 45.2
Cpa.g.sc72.63 Carica papaya HOM05D006830 ORTHO05D008119 4.6e-38 163.3 245 46.1
Sc20g0007150 Simmondsia chinensis HOM05D006830 ORTHO05D008119 4.6e-38 163.3 256 43.4
Potri.016G139000 Populus trichocarpa HOM05D006830 ORTHO05D008119 6.1e-38 162.9 260 47.7
FAN02G1118 Fragaria x ananassa HOM05D006830 ORTHO05D008119 7.9e-38 162.5 256 46.9
Ciclev10011645m.g Citrus clementina HOM05D006830 ORTHO05D008119 6.7e-37 159.5 250 46.8
Duzib268G1795 Durio zibethinus HOM05D006830 ORTHO05D008119 8.8e-37 159.1 208 51.0
COL.COLO4_21252 Corchorus olitorius HOM05D006830 ORTHO05D008119 2.5e-36 157.5 226 48.7
Gorai.006G236000 Gossypium raimondii HOM05D006830 ORTHO05D008119 7.4e-36 156.0 236 44.9
Atru.chr8.80 Acer truncatum HOM05D006830 ORTHO05D008119 9.7e-36 155.6 237 46.0
Nn5g26811 Nelumbo nucifera HOM05D006830 ORTHO05D008119 2.2e-35 154.5 249 45.8
Gohir.D09G215500 Gossypium hirsutum HOM05D006830 ORTHO05D008119 3.1e-34 150.6 236 44.1
AUR62029792 Chenopodium quinoa HOM05D006830 ORTHO05D008119 5.3e-34 149.8 256 40.6
EL10Ac7g17129 Beta vulgaris HOM05D006830 ORTHO05D008119 9.1e-34 149.1 256 39.8
Medtr7g073700 Medicago truncatula HOM05D006830 ORTHO05D008119 1.2e-33 148.7 257 45.1
Glyma.09G273000 Glycine max HOM05D006830 ORTHO05D008119 2.6e-33 147.5 227 47.1
MELO3C009096.2 Cucumis melo HOM05D006830 ORTHO05D008119 7.7e-33 146.0 258 45.3
CsaV3_3G032990 Cucumis sativus L. HOM05D006830 ORTHO05D008119 1.3e-32 145.2 260 45.0
AUR62006437 Chenopodium quinoa HOM05D006830 ORTHO05D008119 1.7e-32 144.8 256 39.5
Rhsim05G0232400 Rhododendron simsii HOM05D006830 ORTHO05D008119 5.0e-32 143.3 606 29.2
Glyma.18G216100 Glycine max HOM05D006830 ORTHO05D008119 8.5e-32 142.5 222 49.1
CSS0029082 Camellia sinensis var. sinensis HOM05D006830 ORTHO05D008119 2.5e-31 141.0 286 40.2
Duzib151G0823 Durio zibethinus HOM05D006830 ORTHO05D008119 5.5e-31 139.8 208 44.7
Sabra04G0154900 Salix brachista HOM05D006830 ORTHO05D008119 2.7e-30 137.5 240 44.2
TPR.G24307 Trifolium pratense HOM05D006830 ORTHO05D008119 2.7e-30 137.5 217 46.5
Gohir.A09G213672 Gossypium hirsutum HOM05D006830 ORTHO05D008119 3.6e-30 137.1 219 42.9
Nitab4.5_0000048g0180 Nicotiana tabacum HOM05D006830 ORTHO05D008119 7.9e-30 136.0 275 39.6
Hma1.2p1_0537F.1_g174220 Hydrangea macrophylla HOM05D006830 ORTHO05D008119 3.9e-29 133.7 315 37.8
MBI15_g32284_MAGBIO Magnolia biondii HOM05D006830 ORTHO05D008119 2.0e-28 131.3 262 39.3
Oeu030099.2 Olea europaea HOM05D006830 ORTHO05D008119 4.4e-28 130.2 274 41.2
Lalb_Chr01g0023901 Lupinus albus HOM05D006830 ORTHO05D008119 7.4e-28 129.4 224 45.5
Solyc09g016940.4 Solanum lycopersicum HOM05D006830 ORTHO05D008119 9.7e-28 129.0 286 39.2
ClCG10G022820 Citrullus lanatus HOM05D006830 ORTHO05D008119 1.7e-27 128.3 303 39.3
Sed0004389 Sechium edule HOM05D006830 ORTHO05D008119 4.8e-27 126.7 222 44.6
Sopen09g010200 Solanum pennellii HOM05D006830 ORTHO05D008119 8.2e-27 125.9 286 38.5
Carub.0004s2057 Capsella rubella HOM05D006830 ORTHO05D008119 3.1e-26 124.0 255 38.0
ECA248G1589 Erigeron canadensis HOM05D006830 ORTHO05D008119 5.3e-26 123.2 259 38.2
Nitab4.5_0001876g0080 Nicotiana tabacum HOM05D006830 ORTHO05D008119 9.1e-26 122.5 275 37.8
Sp4g20920 Schrenkiella parvula HOM05D006830 ORTHO05D008119 1.5e-25 121.7 255 36.5
Ah.08g209170 Amaranthus hybridus HOM05D006830 ORTHO05D008119 7.7e-25 119.4 258 36.0
C03p25270 Brassica napus HOM05D006830 ORTHO05D008119 1.0e-24 119.0 258 37.2
BolC3t14921H Brassica oleracea HOM05D006830 ORTHO05D008119 1.0e-24 119.0 258 37.2
Oeu026939.4 Olea europaea HOM05D006830 ORTHO05D008119 1.0e-24 119.0 272 40.8
Thhalv10016585m.g Eutrema salsugineum HOM05D006830 ORTHO05D008119 2.9e-24 117.5 255 38.0
A03p21400 Brassica napus HOM05D006830 ORTHO05D008119 6.5e-24 116.3 258 36.8
BraA03t11375Z Brassica rapa HOM05D006830 ORTHO05D008119 1.4e-23 115.2 258 36.4
Peaxi162Scf00732g00253 Petunia axillaris HOM05D006830 ORTHO05D008119 4.2e-23 113.6 252 37.7
Hund19745 Selenicereus undatus HOM05D006830 ORTHO05D008119 1.6e-22 111.7 495 33.5
vmacro20384 Vaccinium macrocarpon HOM05D006830 ORTHO05D008119 2.1e-22 111.3 530 40.6
VMungo1383G1745 Vigna mungo HOM05D006830 ORTHO05D008119 1.4e-21 108.6 258 39.1
MSTRG.18932 Avicennia marina HOM05D006830 ORTHO05D008119 1.8e-21 108.2 330 31.5
Migut.J00020 Erythranthe guttata HOM05D006830 ORTHO05D008119 2.3e-21 107.8 261 35.2
THA.LOC104806205 Tarenaya hassleriana HOM05D006830 ORTHO05D008119 3.0e-21 107.5 260 35.4
BcaC01g05528 Brassica carinata HOM05D006830 ORTHO05D008119 6.7e-21 106.3 251 35.9
Ca_07782_v3 Cicer arietinum L. HOM05D006830 ORTHO05D008119 6.7e-21 106.3 216 41.2
Cc06_g00270 Coffea canephora HOM05D002857 ORTHO05D008347 6.7e-21 106.3 280 34.3
CSS0030660 Camellia sinensis var. sinensis HOM05D006830 ORTHO05D008119 8.8e-21 105.9 212 40.6
SGA_v2.0_scaffold85G26596 Striga asiatica HOM05D006830 ORTHO05D008119 1.1e-20 105.5 269 33.5
CiPaw.10G165800 Carya illinoinensis HOM05D006830 ORTHO05D008119 9.7e-20 102.4 113 59.3
AL4G35860 Arabidopsis lyrata HOM05D006830 ORTHO05D008119 3.1e-18 97.4 203 40.4
DCAR_023967 Daucus carota HOM05D006830 ORTHO05D008119 4.1e-18 97.1 290 33.4
CDE04G1359 Ceratophyllum demersum HOM05D006830 ORTHO05D008119 7.0e-18 96.3 276 33.7
AT2G38580 Arabidopsis thaliana HOM05D006830 ORTHO05D008119 9.1e-18 95.9 203 40.4
Phvul.008G080600 Phaseolus vulgaris HOM05D006830 ORTHO05D008119 5.9e-17 93.2 177 41.8
BcaB01g03674 Brassica carinata HOM05D006830 ORTHO05D008119 7.7e-17 92.8 255 32.5
CARHR133260 Cardamine hirsuta HOM05D006830 ORTHO05D008119 1.7e-16 91.7 230 34.3
Hund03691 Selenicereus undatus HOM05D006830 ORTHO05D008119 2.2e-16 91.3 277 33.6
HanXRQChr01g0000521 Helianthus annuus HOM05D006830 ORTHO05D008119 1.5e-15 88.6 223 37.7
CANSAT60G0001 Cannabis sativa HOM05D006830 ORTHO05D008119 3.2e-15 87.4 153 43.1
CANSAT21G1452 Cannabis sativa HOM05D006830 ORTHO05D008119 9.4e-15 85.9 151 43.0
CSS0037917 Camellia sinensis var. sinensis HOM05D006830 ORTHO05D008119 1.2e-14 85.5 211 37.4
PSO384G2539 Papaver somniferum HOM05D006830 ORTHO05D008119 1.2e-14 85.5 261 29.9
C03p25310 Brassica napus HOM05D006830 ORTHO05D008119 4.7e-14 83.6 253 30.4
PSO339G2021 Papaver somniferum HOM05D006830 ORTHO05D008119 2.9e-08 64.3 222 27.9
unitig_22.g6617 Utricularia gibba HOM05D006830 ORTHO05D008119 1.1e-07 62.4 265 28.7
Actinidia11494 Actinidia chinensis HOM05D040087 ORTHO05D008119 9.4e-07 59.3 93 49.5
ATR1127G221 Amborella trichopoda HOM05D006830 ORTHO05D008119 8.0e-06 56.2 110 38.2


User provided reference genes

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