Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_21176 Corylus avellana HOM05D007999 ORTHO05D000248 2.4e-60 235.3 120 100.0
Cfa017033 Carpinus fangiana HOM05D007999 ORTHO05D000248 6.0e-56 220.7 120 93.3
Thecc.04G151500 Theobroma cacao HOM05D007999 ORTHO05D000248 1.5e-30 136.3 120 64.2
Gohir.A03G087400 Gossypium hirsutum HOM05D007999 ORTHO05D000248 2.2e-29 132.5 121 62.0
Gohir.D02G108100 Gossypium hirsutum HOM05D007999 ORTHO05D000248 2.2e-29 132.5 121 62.0
CiPaw.09G221400 Carya illinoinensis HOM05D007999 ORTHO05D000248 8.2e-29 130.6 117 64.1
Gorai.005G122700 Gossypium raimondii HOM05D007999 ORTHO05D000248 1.8e-28 129.4 121 61.2
Rhsim05G0230600 Rhododendron simsii HOM05D007999 ORTHO05D000248 4.1e-28 128.3 124 59.7
Manes.09G117900 Manihot esculenta HOM05D007999 ORTHO05D000248 7.0e-28 127.5 123 61.8
QL07p032111 Quercus lobata HOM05D007999 ORTHO05D000248 1.6e-27 126.3 124 58.1
Sabra04G0153500 Salix brachista HOM05D007999 ORTHO05D000248 7.7e-27 124.0 131 58.8
Psat7g234760 Pisum sativum HOM05D007999 ORTHO05D000248 1.7e-26 122.9 121 57.9
Potri.016G136800 Populus trichocarpa HOM05D007999 ORTHO05D000248 2.9e-26 122.1 130 57.7
Actinidia11508 Actinidia chinensis HOM05D007999 ORTHO05D000248 2.1e-24 115.9 122 56.6
Hma1.2p1_0537F.1_g174340 Hydrangea macrophylla HOM05D007999 ORTHO05D000248 3.0e-23 112.1 123 56.1
COL.COLO4_06481 Corchorus olitorius HOM05D007752 ORTHO05D000248 4.0e-23 111.7 110 59.1
Phvul.010G070300 Phaseolus vulgaris HOM05D007999 ORTHO05D000248 4.0e-23 111.7 121 54.5
Medtr4g028110 Medicago truncatula HOM05D007999 ORTHO05D000248 5.2e-23 111.3 120 54.2
FAN02G1196 Fragaria x ananassa HOM05D007999 ORTHO05D000248 8.8e-23 110.5 124 46.8
Glyma.01G133200 Glycine max HOM05D007999 ORTHO05D000248 2.0e-22 109.4 119 53.8
VMungo0331G0380 Vigna mungo HOM05D007999 ORTHO05D000248 5.7e-22 107.8 120 54.2
RcHm_v2.0_Chr3g0460461 Rosa chinensis HOM05D007999 ORTHO05D000248 7.5e-22 107.5 123 50.4
Glyma.03G034300 Glycine max HOM05D007999 ORTHO05D000248 1.3e-21 106.7 119 53.8
Ciclev10013035m.g Citrus clementina HOM05D007999 ORTHO05D000248 2.2e-21 105.9 132 54.5
FvH4_6g09860 Fragaria vesca HOM05D007999 ORTHO05D000248 2.2e-21 105.9 124 48.4
Dinv25344 Davidia involucrata HOM05D007999 ORTHO05D000248 2.8e-21 105.5 108 57.4
TAR636G2047 Trochodendron aralioides HOM05D007999 ORTHO05D000248 3.7e-21 105.1 121 55.4
SGA_v2.0_scaffold373G50183 Striga asiatica HOM05D007999 ORTHO05D000248 8.3e-21 104.0 120 50.8
Ca_26988_v3 Cicer arietinum L. HOM05D007999 ORTHO05D000248 1.1e-20 103.6 120 51.7
Oeu060433.1 Olea europaea HOM05D007999 ORTHO05D000248 1.1e-20 103.6 120 50.8
Migut.J00037 Erythranthe guttata HOM05D007999 ORTHO05D000248 1.4e-20 103.2 115 53.0
Lalb_Chr07g0190371 Lupinus albus HOM05D007999 ORTHO05D000248 1.4e-20 103.2 117 53.8
TAR267G0002 Trochodendron aralioides HOM05D007999 ORTHO05D000248 1.8e-20 102.8 121 54.5
TPR.G5017 Trifolium pratense HOM05D007999 ORTHO05D000248 2.4e-20 102.4 120 51.7
Lj3g0012389 Lotus japonicus HOM05D007999 ORTHO05D000248 9.1e-20 100.5 122 50.8
Gohir.A10G150800 Gossypium hirsutum HOM05D007999 ORTHO05D000248 1.2e-19 100.1 118 51.7
Nitab4.5_0000048g0020 Nicotiana tabacum HOM05D007999 ORTHO05D000248 3.5e-19 98.6 132 47.7
Solyc09g042230.2 Solanum lycopersicum HOM05D007999 ORTHO05D000248 3.5e-19 98.6 118 46.6
Gohir.D10G115500 Gossypium hirsutum HOM05D007999 ORTHO05D000248 4.5e-19 98.2 115 52.2
Gorai.011G127200 Gossypium raimondii HOM05D007999 ORTHO05D000248 4.5e-19 98.2 115 52.2
MSTRG.5499 Avicennia marina HOM05D007999 ORTHO05D000248 1.0e-18 97.1 120 49.2
Nitab4.5_0004433g0050 Nicotiana tabacum HOM05D007999 ORTHO05D000248 1.3e-18 96.7 124 49.2
Sopen09g015370 Solanum pennellii HOM05D007999 ORTHO05D000248 2.2e-18 95.9 113 46.9
TPR.G14122 Trifolium pratense HOM05D007999 ORTHO05D000248 3.8e-18 95.1 124 48.4
VMungo1383G2835 Vigna mungo HOM05D007999 ORTHO05D000248 8.5e-18 94.0 119 52.1
Prupe.6G293700 Prunus persica HOM05D007999 ORTHO05D000248 2.5e-17 92.4 120 46.7
Medtr7g073270 Medicago truncatula HOM05D007999 ORTHO05D000248 4.2e-17 91.7 121 48.8
Psat3g118800 Pisum sativum HOM05D007999 ORTHO05D000248 5.5e-17 91.3 122 50.8
Phvul.008G082700 Phaseolus vulgaris HOM05D007999 ORTHO05D000248 7.2e-17 90.9 126 51.6
PGSC0003DMG400031466 Solanum tuberosum HOM05D007999 ORTHO05D000248 9.4e-17 90.5 120 45.0
Cpa.g.sc86.58 Carica papaya HOM05D007999 ORTHO05D000248 1.2e-16 90.1 120 46.7
Lsat_1_v5_gn_8_107720 Lactuca sativa HOM05D007999 ORTHO05D000248 1.2e-16 90.1 129 48.1
Lj1g0020119 Lotus japonicus HOM05D007999 ORTHO05D000248 2.7e-16 89.0 129 48.8
SalBow8G1753 Salvia bowleyana HOM05D007999 ORTHO05D000248 2.7e-16 89.0 115 50.4
Atru.chr8.114 Acer truncatum HOM05D007999 ORTHO05D000248 6.1e-16 87.8 143 44.1
Lalb_Chr03g0043771 Lupinus albus HOM05D007999 ORTHO05D000248 1.4e-15 86.7 127 48.8
FAN14G1029 Fragaria x ananassa HOM05D007752 ORTHO05D009994 1.8e-15 86.3 112 46.4
FAN09G1066 Fragaria x ananassa HOM05D007752 ORTHO05D009994 2.3e-15 85.9 112 42.9
ClCG10G022740 Citrullus lanatus HOM05D007999 ORTHO05D000248 6.8e-15 84.3 128 44.5
Sc20g0006970 Simmondsia chinensis HOM05D007999 ORTHO05D000248 2.6e-14 82.4 122 43.4
Ah.08g209300 Amaranthus hybridus HOM05D007999 ORTHO05D000248 7.5e-14 80.9 129 38.8
EL10Ac7g17101 Beta vulgaris HOM05D007752 ORTHO05D000248 7.5e-14 80.9 129 41.9
AUR62006417 Chenopodium quinoa HOM05D007752 ORTHO05D000248 1.3e-13 80.1 131 40.5
ECA236G4781 Erigeron canadensis HOM05D007999 ORTHO05D000248 1.3e-13 80.1 89 56.2
MBI03_g22788_MAGBIO Magnolia biondii HOM05D007999 ORTHO05D000248 3.7e-13 78.6 109 46.8
Actinidia29032 Actinidia chinensis HOM05D007752 ORTHO05D009994 6.3e-13 77.8 87 55.2
Peaxi162Scf00732g00333 Petunia axillaris HOM05D007999 ORTHO05D000248 8.3e-13 77.4 126 43.7
Sp5g05490 Schrenkiella parvula HOM05D007999 ORTHO05D000248 7.0e-12 74.3 116 41.4
AUR62029765 Chenopodium quinoa HOM05D007752 ORTHO05D009994 9.1e-12 73.9 129 38.8
Nn2g10298 Nelumbo nucifera HOM05D007999 ORTHO05D000248 9.1e-12 73.9 119 45.4
Peaxi162Scf00732g00031 Petunia axillaris HOM05D007752 ORTHO05D000248 1.6e-11 73.2 84 47.6
Sed0006729 Sechium edule HOM05D007999 ORTHO05D000248 4.5e-11 71.6 129 38.8
Aqoxy4G02427 Aquilegia oxysepala HOM05D007999 ORTHO05D000248 1.7e-10 69.7 118 38.1
Thhalv10006368m.g Eutrema salsugineum HOM05D007999 ORTHO05D000248 3.8e-10 68.6 119 38.7
Oeu060213.1 Olea europaea HOM05D007999 ORTHO05D000248 1.9e-09 66.2 92 46.7
Carub.0005s2390 Capsella rubella HOM05D007999 ORTHO05D000248 3.3e-09 65.5 116 40.5
Oeu060211.1 Olea europaea HOM05D000784 ORTHO05D000248 5.5e-09 64.7 89 47.2
A09p50020 Brassica napus HOM05D002367 ORTHO05D009515 6.1e-08 61.2 113 37.2
BraA09t40452Z Brassica rapa HOM05D007999 ORTHO05D000248 6.1e-08 61.2 113 37.2
BcaC07g40025 Brassica carinata HOM05D007585 ORTHO05D009515 1.0e-07 60.5 113 37.2
C08p32430 Brassica napus HOM05D002367 ORTHO05D009515 1.0e-07 60.5 113 37.2
BolC8t50857H Brassica oleracea HOM05D007999 ORTHO05D000248 1.0e-07 60.5 113 37.2
unitig_749.g14092 Utricularia gibba HOM05D007999 ORTHO05D000248 1.8e-07 59.7 112 37.5
BcaC07g40047 Brassica carinata HOM05D007585 ORTHO05D009515 5.2e-07 58.2 115 35.7
BcaC07g40077 Brassica carinata HOM05D007585 ORTHO05D009515 5.2e-07 58.2 115 35.7


User provided reference genes

Program Settings