Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_21160 Corylus avellana HOM05D009046 ORTHO05D010499 2.5e-49 199.1 159 100.0
Cfa017052 Carpinus fangiana HOM05D009046 ORTHO05D010499 1.7e-37 159.8 160 58.1
QL09p025537 Quercus lobata HOM05D009046 ORTHO05D010499 1.2e-14 84.0 74 56.8
Thecc.04G176200 Theobroma cacao HOM05D009046 ORTHO05D010499 5.8e-14 81.6 94 50.0
Thecc.04G174900 Theobroma cacao HOM05D009046 ORTHO05D010499 1.7e-13 80.1 83 51.8
Thecc.04G174700 Theobroma cacao HOM05D009046 ORTHO05D010499 2.9e-13 79.3 83 51.8
Thecc.04G174500 Theobroma cacao HOM05D009046 ORTHO05D010499 3.8e-13 79.0 83 50.6
QL09p042663 Quercus lobata HOM05D009046 ORTHO05D010499 8.4e-13 77.8 82 51.2
Cfa015893 Carpinus fangiana HOM05D009046 ORTHO05D010499 1.9e-12 76.6 78 48.7
QL09p042742 Quercus lobata HOM05D009046 ORTHO05D010499 2.4e-12 76.3 82 50.0
QL09p042668 Quercus lobata HOM05D009046 ORTHO05D010499 4.2e-12 75.5 82 48.8
QL07p032484 Quercus lobata HOM05D009046 ORTHO05D010499 2.3e-10 69.7 65 56.9
QL07p032500 Quercus lobata HOM05D011519 ORTHO05D010499 3.0e-10 69.3 65 55.4
Atru.chr2.2398 Acer truncatum HOM05D009046 ORTHO05D010499 1.9e-09 66.6 77 49.4
QL09p042594 Quercus lobata HOM05D009046 ORTHO05D010499 3.3e-09 65.9 50 62.0
Ciclev10023880m.g Citrus clementina HOM05D009046 ORTHO05D010499 4.8e-08 62.0 52 57.7
Potri.013G054600 Populus trichocarpa HOM05D009046 ORTHO05D010499 4.8e-08 62.0 63 50.8
Manes.09G014201 Manihot esculenta HOM05D009046 ORTHO05D010499 6.2e-08 61.6 70 44.3
COL.COLO4_20670 Corchorus olitorius HOM05D009046 ORTHO05D010499 8.1e-08 61.2 57 52.6
Prupe.2G131500 Prunus persica HOM05D009046 ORTHO05D010499 1.4e-07 60.5 82 42.7
PGR119G0114 Punica granatum HOM05D009046 ORTHO05D010499 1.4e-07 60.5 74 45.9
Manes.09G012601 Manihot esculenta HOM05D009046 ORTHO05D010499 1.8e-07 60.1 70 42.9
Cpa.g.sc76.56 Carica papaya HOM05D009046 ORTHO05D010499 4.0e-07 58.9 75 46.7
Manes.09G132801 Manihot esculenta HOM05D009046 ORTHO05D010499 4.0e-07 58.9 75 42.7
Cpa.g.sc48.221 Carica papaya HOM05D009046 ORTHO05D010499 5.3e-07 58.5 55 54.5
Prupe.2G131400 Prunus persica HOM05D009046 ORTHO05D010499 6.9e-07 58.2 78 39.7
Cpa.g.sc34.167 Carica papaya HOM05D009046 ORTHO05D010499 1.2e-06 57.4 76 44.7
Prupe.2G131600 Prunus persica HOM05D009046 ORTHO05D010499 1.2e-06 57.4 78 39.7
Cpa.g.c34620 Carica papaya HOM05D009046 ORTHO05D010499 2.0e-06 56.6 56 53.6
Cpa.g.sc3.422 Carica papaya HOM05D009046 ORTHO05D010499 2.0e-06 56.6 79 43.0
Cpa.g.sc3.420 Carica papaya HOM05D009046 ORTHO05D010499 3.4e-06 55.8 51 52.9
Ca_20487_v3 Cicer arietinum L. HOM05D000057 ORTHO05D000021 7.6e-06 54.7 62 43.5
Nn2g10332 Nelumbo nucifera HOM05D009046 ORTHO05D010499 7.6e-06 54.7 73 41.1
TAR636G3259 Trochodendron aralioides HOM05D000057 ORTHO05D010499 7.6e-06 54.7 84 38.1
Ca_20477_v3 Cicer arietinum L. HOM05D000057 ORTHO05D000021 9.9e-06 54.3 64 42.2
FvH4_6g10090 Fragaria vesca HOM05D019556 ORTHO05D017924 9.9e-06 54.3 74 40.5
FAN14G4714 Fragaria x ananassa HOM05D019556 ORTHO05D017924 9.9e-06 54.3 74 40.5


User provided reference genes

Program Settings