Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_21099 Corylus avellana HOM05D006476 ORTHO05D008178 1.4e-125 453.0 224 100.0
Haze_21064 Corylus avellana HOM05D006476 ORTHO05D008178 1.3e-43 180.6 122 76.2
Cfa017133 Carpinus fangiana HOM05D006476 ORTHO05D008178 4.2e-42 175.6 133 69.2
ClCG10G022410 Citrullus lanatus HOM05D006476 ORTHO05D008178 3.6e-38 162.5 181 50.3
Sed0000477 Sechium edule HOM05D006476 ORTHO05D008178 1.2e-36 157.5 122 63.1
PGR031G1226 Punica granatum HOM05D006476 ORTHO05D008178 2.0e-36 156.8 122 64.8
RcHm_v2.0_Chr3g0461841 Rosa chinensis HOM05D006476 ORTHO05D008178 3.4e-36 156.0 132 59.8
Cpa.g.sc162.36 Carica papaya HOM05D006476 ORTHO05D008178 1.3e-35 154.1 132 59.8
FvH4_6g10790 Fragaria vesca HOM05D006476 ORTHO05D008178 2.2e-35 153.3 122 62.3
FAN05G3786 Fragaria x ananassa HOM05D006476 ORTHO05D008178 2.2e-35 153.3 122 62.3
FAN05G4924 Fragaria x ananassa HOM05D006476 ORTHO05D008178 2.2e-35 153.3 122 62.3
FAN09G2591 Fragaria x ananassa HOM05D006476 ORTHO05D008178 2.2e-35 153.3 122 62.3
FAN09G3668 Fragaria x ananassa HOM05D006476 ORTHO05D008178 2.2e-35 153.3 122 62.3
FAN14G4129 Fragaria x ananassa HOM05D006476 ORTHO05D008178 2.2e-35 153.3 122 62.3
CiPaw.10G160000 Carya illinoinensis HOM05D006476 ORTHO05D008178 3.8e-35 152.5 123 60.2
Gohir.A01G229200 Gossypium hirsutum HOM05D006476 ORTHO05D008178 3.8e-35 152.5 106 68.9
QL07p034180 Quercus lobata HOM05D006476 ORTHO05D008178 3.8e-35 152.5 132 57.6
Oeu038728.1 Olea europaea HOM05D006476 ORTHO05D008178 4.9e-35 152.1 122 63.1
Thecc.05G008700 Theobroma cacao HOM05D006476 ORTHO05D008178 4.9e-35 152.1 106 69.8
Gohir.A04G095014 Gossypium hirsutum HOM05D006476 ORTHO05D008178 6.4e-35 151.8 106 67.9
Gohir.D04G134700 Gossypium hirsutum HOM05D006476 ORTHO05D008178 6.4e-35 151.8 106 67.9
Gorai.012G118300 Gossypium raimondii HOM05D006476 ORTHO05D008178 6.4e-35 151.8 106 67.9
Prupe.6G283400 Prunus persica HOM05D006476 ORTHO05D008178 8.4e-35 151.4 131 59.5
Potri.016G123900 Populus trichocarpa HOM05D006476 ORTHO05D008178 1.4e-34 150.6 122 62.3
Eucgr.A00607 Eucalyptus grandis HOM05D006476 ORTHO05D008178 1.9e-34 150.2 132 59.1
Gorai.002G265900 Gossypium raimondii HOM05D006476 ORTHO05D008178 1.9e-34 150.2 106 67.9
Nn2g10977 Nelumbo nucifera HOM05D006476 ORTHO05D008178 1.9e-34 150.2 132 58.3
Gohir.D01G219100 Gossypium hirsutum HOM05D006476 ORTHO05D008178 3.2e-34 149.4 106 67.0
Sabra16G0118700 Salix brachista HOM05D006476 ORTHO05D008178 3.2e-34 149.4 122 61.5
COL.COLO4_14474 Corchorus olitorius HOM05D006476 ORTHO05D008178 9.3e-34 147.9 132 58.3
Cc06_g00920 Coffea canephora HOM05D006476 ORTHO05D008178 1.6e-33 147.1 177 46.3
TAR633G1736 Trochodendron aralioides HOM05D006476 ORTHO05D008178 1.6e-33 147.1 125 59.2
CDE04G2527 Ceratophyllum demersum HOM05D006476 ORTHO05D008178 2.1e-33 146.7 122 60.7
Dinv10268 Davidia involucrata HOM05D006476 ORTHO05D008178 4.6e-33 145.6 122 57.4
CSS0013060 Camellia sinensis var. sinensis HOM05D006476 ORTHO05D008178 6.0e-33 145.2 113 63.7
CSS0023949 Camellia sinensis var. sinensis HOM05D006476 ORTHO05D008178 6.0e-33 145.2 113 63.7
Hma1.2p1_0479F.1_g161560 Hydrangea macrophylla HOM05D006476 ORTHO05D008178 1.0e-32 144.4 122 60.7
GSVIVG01030297001 Vitis vinifera HOM05D006476 ORTHO05D008178 1.0e-32 144.4 132 56.1
Sc07g0006480 Simmondsia chinensis HOM05D006476 ORTHO05D008178 1.8e-32 143.7 121 61.2
TWI53G1048 Tripterygium wilfordii HOM05D006476 ORTHO05D008178 3.0e-32 142.9 121 58.7
BcaB01g06105 Brassica carinata HOM05D006476 ORTHO05D008178 6.7e-32 141.7 126 57.9
C03p00370 Brassica napus HOM05D006476 ORTHO05D008178 6.7e-32 141.7 126 57.9
BolC3t12605H Brassica oleracea HOM05D006476 ORTHO05D008178 6.7e-32 141.7 126 57.9
CAN.G168.26 Capsicum annuum HOM05D006476 ORTHO05D008178 1.1e-31 141.0 122 57.4
Sp6g40850 Schrenkiella parvula HOM05D006476 ORTHO05D008178 1.1e-31 141.0 126 57.1
A03p00230 Brassica napus HOM05D006476 ORTHO05D008178 1.9e-31 140.2 126 57.1
BraA03t09413Z Brassica rapa HOM05D006476 ORTHO05D008178 1.9e-31 140.2 126 57.1
CAN.G1194.2 Capsicum annuum HOM05D006476 ORTHO05D008178 2.5e-31 139.8 122 56.6
Thhalv10013251m.g Eutrema salsugineum HOM05D006476 ORTHO05D008178 2.5e-31 139.8 130 56.9
AL6G10460 Arabidopsis lyrata HOM05D006476 ORTHO05D008178 3.3e-31 139.4 132 55.3
CARHR211940 Cardamine hirsuta HOM05D006476 ORTHO05D008178 4.3e-31 139.0 132 55.3
Nitab4.5_0004676g0040 Nicotiana tabacum HOM05D006476 ORTHO05D008178 4.3e-31 139.0 122 55.7
Duzib093G1646 Durio zibethinus HOM05D006476 ORTHO05D008178 5.6e-31 138.7 106 63.2
THA.LOC104816184 Tarenaya hassleriana HOM05D006476 ORTHO05D008178 5.6e-31 138.7 133 57.1
Carub.0006s0024 Capsella rubella HOM05D006476 ORTHO05D008178 7.4e-31 138.3 132 55.3
AT5G01590 Arabidopsis thaliana HOM05D006476 ORTHO05D008178 9.6e-31 137.9 132 54.5
Solyc09g013100.3 Solanum lycopersicum HOM05D006476 ORTHO05D008178 9.6e-31 137.9 122 55.7
Sopen09g006940 Solanum pennellii HOM05D006476 ORTHO05D008178 9.6e-31 137.9 122 55.7
PGSC0003DMG400029192 Solanum tuberosum HOM05D006476 ORTHO05D008178 9.6e-31 137.9 122 55.7
MD12G1177900 Malus domestica HOM05D006476 ORTHO05D008178 1.6e-30 137.1 117 58.1
BcaB01g06237 Brassica carinata HOM05D006476 ORTHO05D008178 2.8e-30 136.3 130 54.6
Lalb_Chr12g0207111 Lupinus albus HOM05D006476 ORTHO05D008178 2.8e-30 136.3 135 52.6
MSTRG.10202 Avicennia marina HOM05D006476 ORTHO05D008178 3.7e-30 136.0 110 59.1
AUR62030780 Chenopodium quinoa HOM05D006476 ORTHO05D008178 3.7e-30 136.0 122 55.7
Nitab4.5_0000230g0070 Nicotiana tabacum HOM05D006476 ORTHO05D008178 3.7e-30 136.0 122 54.1
ATR0789G002 Amborella trichopoda HOM05D006476 ORTHO05D008178 4.8e-30 135.6 130 53.1
Solyc09g015470.4 Solanum lycopersicum HOM05D006476 ORTHO05D008178 4.8e-30 135.6 122 54.9
CsaV3_3G033460 Cucumis sativus L. HOM05D006476 ORTHO05D008178 1.1e-29 134.4 122 54.1
CANSAT35G1014 Cannabis sativa HOM05D006476 ORTHO05D008178 1.4e-29 134.0 112 58.0
unitig_26.g9345 Utricularia gibba HOM05D006476 ORTHO05D008178 2.4e-29 133.3 123 54.5
Manes.09G110300 Manihot esculenta HOM05D006476 ORTHO05D008178 4.0e-29 132.5 121 58.7
arahy.Tifrunner.gnm1.ann1.39JBYW Arachis hypogaea HOM05D006476 ORTHO05D008178 1.2e-28 131.0 130 51.5
Ciclev10011480m.g Citrus clementina HOM05D006476 ORTHO05D008178 1.2e-28 131.0 128 53.1
AUR62030513 Chenopodium quinoa HOM05D006476 ORTHO05D008178 1.5e-28 130.6 121 53.7
arahy.Tifrunner.gnm1.ann1.86RN6H Arachis hypogaea HOM05D006476 ORTHO05D008178 2.0e-28 130.2 130 51.5
MELO3C009137.2 Cucumis melo HOM05D006476 ORTHO05D008178 2.6e-28 129.8 122 53.3
Glyma.01G124200 Glycine max HOM05D006476 ORTHO05D008178 3.4e-28 129.4 136 48.5
Atru.chr8.2316 Acer truncatum HOM05D006476 ORTHO05D008178 5.8e-28 128.6 130 52.3
Ah.12g058950 Amaranthus hybridus HOM05D006476 ORTHO05D008178 3.8e-27 125.9 132 50.8
Lj3g0015173 Lotus japonicus HOM05D006476 ORTHO05D008178 3.8e-27 125.9 130 48.5
Aa31LG1G23210 Aethionema arabicum HOM05D006476 ORTHO05D008178 4.9e-27 125.6 126 50.0
EL10Ac5g12509 Beta vulgaris HOM05D006476 ORTHO05D008178 2.5e-26 123.2 131 48.9
Migut.L02041 Erythranthe guttata HOM05D006476 ORTHO05D008178 2.5e-26 123.2 108 55.6
Aqoxy1G01315 Aquilegia oxysepala HOM05D006476 ORTHO05D008178 4.2e-26 122.5 132 50.0
ECA247G0212 Erigeron canadensis HOM05D006476 ORTHO05D008178 5.5e-26 122.1 135 50.4
HanXRQChr10g0287121 Helianthus annuus HOM05D006476 ORTHO05D008178 1.6e-25 120.6 125 51.2
Phvul.010G065700 Phaseolus vulgaris HOM05D006476 ORTHO05D008178 1.6e-25 120.6 122 46.7
arahy.Tifrunner.gnm1.ann1.36T17X Arachis hypogaea HOM05D006476 ORTHO05D008178 2.7e-25 119.8 125 48.0
VMungo0331G1781 Vigna mungo HOM05D006476 ORTHO05D008178 2.7e-25 119.8 132 45.5
PSO765G0213 Papaver somniferum HOM05D006476 ORTHO05D008178 6.0e-25 118.6 120 48.3
Lsat_1_v5_gn_9_37301 Lactuca sativa HOM05D006476 ORTHO05D008178 1.0e-24 117.9 126 50.8
HPP92_001920 Vanilla planifolia HOM05D006476 ORTHO05D008178 1.3e-24 117.5 98 57.1
PSO349G0327 Papaver somniferum HOM05D006476 ORTHO05D008178 1.8e-24 117.1 123 49.6
Hund10946 Selenicereus undatus HOM05D006476 ORTHO05D008178 3.0e-24 116.3 132 45.5
Ca_20338_v3 Cicer arietinum L. HOM05D006476 ORTHO05D008178 4.3e-23 112.5 134 46.3
SGA_v2.0_scaffold110G31194 Striga asiatica HOM05D006476 ORTHO05D008178 1.1e-21 107.8 193 34.7
TPR.G5241 Trifolium pratense HOM05D006476 ORTHO05D008178 1.2e-20 104.4 130 44.6
Medtr4g014600 Medicago truncatula HOM05D006476 ORTHO05D008178 1.5e-20 104.0 130 43.8
Peaxi162Scf01132g00347 Petunia axillaris HOM05D006476 ORTHO05D008178 1.5e-20 104.0 102 52.0
Lj3A863T42 Lonicera japonica HOM05D006476 ORTHO05D008178 4.5e-20 102.4 126 47.6
Actinidia29077 Actinidia chinensis HOM05D006476 ORTHO05D008178 7.6e-20 101.7 121 46.3
ATR0810G038 Amborella trichopoda HOM05D006476 ORTHO05D008178 1.3e-16 90.9 83 53.0
Psat7g247200 Pisum sativum HOM05D006476 ORTHO05D008178 6.7e-16 88.6 68 52.9
RcHm_v2.0_Chr3g0461921 Rosa chinensis HOM05D006476 ORTHO05D008178 3.7e-14 82.8 54 64.8
SEGI_26269 Sequoiadendron giganteum HOM05D006476 ORTHO05D008178 1.3e-11 74.3 60 53.3
Pp3c1_41280 Physcomitrium patens HOM05D006476 ORTHO05D008178 6.5e-11 72.0 48 66.7
Mapoly0062s0099 Marchantia polymorpha HOM05D006476 ORTHO05D008178 5.5e-10 68.9 63 50.8
AagrBONN_evm.TU.Sc2ySwM_344.2114 Anthoceros agrestis HOM05D006476 ORTHO05D008178 1.2e-09 67.8 54 59.3
BcaNung03295 Brassica carinata HOM05D006476 ORTHO05D008178 1.8e-08 63.9 73 50.7
C09p74660 Brassica napus HOM05D000872 ORTHO05D000777 1.8e-08 63.9 73 50.7
BolC9t60200H Brassica oleracea HOM05D006476 ORTHO05D008178 1.8e-08 63.9 73 50.7
SMO364G0439 Selaginella moellendorffii HOM05D006476 ORTHO05D008178 8.8e-08 61.6 67 37.3
Dinv12144 Davidia involucrata HOM05D006476 ORTHO05D008178 1.5e-07 60.8 55 56.4


User provided reference genes

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