Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_21060 Corylus avellana HOM05D004264 ORTHO05D004680 3.7e-67 258.1 130 100.0
Cfa017136 Carpinus fangiana HOM05D004264 ORTHO05D004680 2.8e-30 135.6 130 60.8
CiPaw.09G213400 Carya illinoinensis HOM05D004264 ORTHO05D004680 5.1e-24 114.8 128 52.3
CsaV3_4G026470 Cucumis sativus L. HOM05D004264 ORTHO05D004680 2.2e-19 99.4 115 44.3
ClCG04G006790 Citrullus lanatus HOM05D004264 ORTHO05D004680 2.9e-19 99.0 119 42.9
Thecc.05G009200 Theobroma cacao HOM05D004264 ORTHO05D004680 2.9e-19 99.0 114 43.9
Dinv08428 Davidia involucrata HOM05D004264 ORTHO05D008966 4.9e-19 98.2 127 45.7
Oeu005191.1 Olea europaea HOM05D004264 ORTHO05D004680 1.4e-18 96.7 58 74.1
Glyma.07G154451 Glycine max HOM05D004264 ORTHO05D004680 3.2e-18 95.5 117 41.9
Hma1.2p1_0479F.1_g161540 Hydrangea macrophylla HOM05D004264 ORTHO05D004680 3.2e-18 95.5 127 44.1
TWI74G1571 Tripterygium wilfordii HOM05D004264 ORTHO05D004680 3.2e-18 95.5 127 42.5
Duzib093G0558 Durio zibethinus HOM05D004264 ORTHO05D004680 5.4e-18 94.7 60 71.7
Glyma.18G205200 Glycine max HOM05D004264 ORTHO05D004680 5.4e-18 94.7 117 41.9
Potri.016G122350 Populus trichocarpa HOM05D004264 ORTHO05D004680 5.4e-18 94.7 60 68.3
Manes.09G110101 Manihot esculenta HOM05D004264 ORTHO05D004680 9.2e-18 94.0 117 46.2
Potri.012G107200 Populus trichocarpa HOM05D004264 ORTHO05D004680 2.1e-17 92.8 60 68.3
Rhsim05G0223700 Rhododendron simsii HOM05D004264 ORTHO05D004680 2.1e-17 92.8 126 42.1
COL.COLO4_14480 Corchorus olitorius HOM05D004264 ORTHO05D004680 2.7e-17 92.4 127 38.6
Gohir.A01G229100 Gossypium hirsutum HOM05D004264 ORTHO05D004680 2.7e-17 92.4 128 39.8
Gohir.D01G219000 Gossypium hirsutum HOM05D004264 ORTHO05D004680 2.7e-17 92.4 128 39.8
Gorai.002G265700 Gossypium raimondii HOM05D004264 ORTHO05D004680 2.7e-17 92.4 128 39.8
TAR623G1256 Trochodendron aralioides HOM05D004264 ORTHO05D004680 1.3e-16 90.1 127 37.8
Medtr1g100900 Medicago truncatula HOM05D004264 ORTHO05D004680 1.7e-16 89.7 118 41.5
CANSAT35G1133 Cannabis sativa HOM05D004264 ORTHO05D004680 2.3e-16 89.4 114 43.0
Ca_07679_v3 Cicer arietinum L. HOM05D004264 ORTHO05D004680 2.3e-16 89.4 59 62.7
Duzib106G1969 Durio zibethinus HOM05D004264 ORTHO05D004680 3.0e-16 89.0 59 64.4
Actinidia29078 Actinidia chinensis HOM05D004264 ORTHO05D004680 5.1e-16 88.2 129 39.5
AUR62030782 Chenopodium quinoa HOM05D004264 ORTHO05D004680 5.1e-16 88.2 58 65.5
TPR.G1155 Trifolium pratense HOM05D004264 ORTHO05D004680 5.1e-16 88.2 65 60.0
Sabra16G0118000 Salix brachista HOM05D004264 ORTHO05D004680 6.6e-16 87.8 55 69.1
Hund14916 Selenicereus undatus HOM05D004264 ORTHO05D004680 6.6e-16 87.8 113 39.8
THA.LOC104816187 Tarenaya hassleriana HOM05D004264 ORTHO05D004680 6.6e-16 87.8 112 42.0
Solyc04g072210.4 Solanum lycopersicum HOM05D004264 ORTHO05D004680 8.7e-16 87.4 56 69.6
EL10Ac5g12510 Beta vulgaris HOM05D004264 ORTHO05D004680 1.1e-15 87.0 60 63.3
Cc05_g01720 Coffea canephora HOM05D004264 ORTHO05D004680 1.1e-15 87.0 126 40.5
FAN09G4226 Fragaria x ananassa HOM05D004264 ORTHO05D004680 1.1e-15 87.0 113 40.7
Atru.chr8.2305 Acer truncatum HOM05D004264 ORTHO05D004680 1.5e-15 86.7 58 63.8
FAN05G3264 Fragaria x ananassa HOM05D004264 ORTHO05D004680 1.5e-15 86.7 113 40.7
Sed0006342 Sechium edule HOM05D004264 ORTHO05D004680 1.5e-15 86.7 117 38.5
Actinidia11558 Actinidia chinensis HOM05D004264 ORTHO05D004680 1.9e-15 86.3 126 38.9
FAN05G1725 Fragaria x ananassa HOM05D004264 ORTHO05D004680 1.9e-15 86.3 113 40.7
FAN05G1746 Fragaria x ananassa HOM05D004264 ORTHO05D004680 1.9e-15 86.3 113 40.7
RcHm_v2.0_Chr3g0462171 Rosa chinensis HOM05D004264 ORTHO05D004680 1.9e-15 86.3 60 63.3
Lj3g0014192 Lotus japonicus HOM05D004264 ORTHO05D004680 2.5e-15 85.9 58 63.8
Lalb_Chr01g0023271 Lupinus albus HOM05D004264 ORTHO05D004680 2.5e-15 85.9 117 41.9
VMungo1383G0682 Vigna mungo HOM05D004264 ORTHO05D004680 2.5e-15 85.9 59 59.3
MD04G1163700 Malus domestica HOM05D004264 ORTHO05D004680 3.3e-15 85.5 60 63.3
PGSC0003DMG400031135 Solanum tuberosum HOM05D004264 ORTHO05D004680 3.3e-15 85.5 56 67.9
VMungo1215G3396 Vigna mungo HOM05D004264 ORTHO05D004680 3.3e-15 85.5 58 60.3
AUR62030512 Chenopodium quinoa HOM05D004264 ORTHO05D004680 4.3e-15 85.1 58 65.5
MBI10_g27417_MAGBIO Magnolia biondii HOM05D004264 ORTHO05D004680 4.3e-15 85.1 57 63.2
Peaxi162Scf00522g00315 Petunia axillaris HOM05D004264 ORTHO05D004680 5.6e-15 84.7 99 46.5
MD12G1177600 Malus domestica HOM05D004264 ORTHO05D004680 7.3e-15 84.3 60 60.0
FvH4_6g10921 Fragaria vesca HOM05D004264 ORTHO05D004680 9.6e-15 84.0 60 61.7
HanXRQChr02g0036821 Helianthus annuus HOM05D004264 ORTHO05D004680 1.6e-14 83.2 57 61.4
Nn8g40771 Nelumbo nucifera HOM05D004264 ORTHO05D004680 1.6e-14 83.2 127 36.2
FAN02G3507 Fragaria x ananassa HOM05D004264 ORTHO05D004680 2.1e-14 82.8 60 60.0
HanXRQChr13g0390251 Helianthus annuus HOM05D004264 ORTHO05D004680 2.1e-14 82.8 59 61.0
ECA233G6002 Erigeron canadensis HOM05D004264 ORTHO05D004680 2.8e-14 82.4 113 38.1
arahy.Tifrunner.gnm1.ann1.IC5F1T Arachis hypogaea HOM05D004264 ORTHO05D004680 3.6e-14 82.0 85 47.1
Aqoxy3G03064 Aquilegia oxysepala HOM05D004264 ORTHO05D004680 6.2e-14 81.3 62 51.6
Phvul.008G094300 Phaseolus vulgaris HOM05D004264 ORTHO05D004680 6.2e-14 81.3 59 57.6
VMungo1383G0816 Vigna mungo HOM05D004264 ORTHO05D004680 6.2e-14 81.3 127 35.4
THA.LOC104827057 Tarenaya hassleriana HOM05D004264 ORTHO05D004680 8.1e-14 80.9 114 37.7
arahy.Tifrunner.gnm1.ann1.G0I7HS Arachis hypogaea HOM05D004264 ORTHO05D004680 1.4e-13 80.1 85 45.9
DCAR_018675 Daucus carota HOM05D004264 ORTHO05D004680 1.4e-13 80.1 57 64.9
PGR004G2045 Punica granatum HOM05D004264 ORTHO05D004680 1.4e-13 80.1 113 38.1
Sp3g07270 Schrenkiella parvula HOM05D004264 ORTHO05D004680 1.4e-13 80.1 113 40.7
AL6G10480 Arabidopsis lyrata HOM05D004264 ORTHO05D004680 1.8e-13 79.7 90 43.3
BcaC09g48040 Brassica carinata HOM05D004264 ORTHO05D004680 1.8e-13 79.7 60 55.0
BNapus_Darmor_BZH_scaffold_167p00190 Brassica napus HOM05D004264 ORTHO05D004680 1.8e-13 79.7 60 55.0
PSO339G3729 Papaver somniferum HOM05D004264 ORTHO05D004680 1.8e-13 79.7 61 57.4
AT3G08880 Arabidopsis thaliana HOM05D004264 ORTHO05D004680 2.4e-13 79.3 60 53.3
BraA01t04327Z Brassica rapa HOM05D004264 ORTHO05D004680 2.4e-13 79.3 60 55.0
Psat3g124240 Pisum sativum HOM05D004264 ORTHO05D004680 2.4e-13 79.3 118 36.4
Oeu041877.1 Olea europaea HOM05D004264 ORTHO05D004680 4.0e-13 78.6 51 68.6
Oeu041878.1 Olea europaea HOM05D004264 ORTHO05D004680 4.0e-13 78.6 51 68.6
BcaC09g47997 Brassica carinata HOM05D004264 ORTHO05D004680 5.3e-13 78.2 60 53.3
AL3G19870 Arabidopsis lyrata HOM05D004264 ORTHO05D004680 9.0e-13 77.4 113 38.1
DCAR_015367 Daucus carota HOM05D004264 ORTHO05D004680 9.0e-13 77.4 56 58.9
Thhalv10021618m.g Eutrema salsugineum HOM05D004264 ORTHO05D004680 1.2e-12 77.0 60 53.3
PSO801G0087 Papaver somniferum HOM05D004264 ORTHO05D004680 1.5e-12 76.6 130 35.4
CARHR083200 Cardamine hirsuta HOM05D004264 ORTHO05D004680 2.0e-12 76.3 115 36.5
Migut.J00116 Erythranthe guttata HOM05D004264 ORTHO05D004680 2.0e-12 76.3 56 64.3
Lsat_1_v5_gn_6_104820 Lactuca sativa HOM05D004264 ORTHO05D004680 2.6e-12 75.9 129 35.7
Carub.0006s0026 Capsella rubella HOM05D004264 ORTHO05D004680 3.4e-12 75.5 58 51.7
Carub.0003s0799 Capsella rubella HOM05D004264 ORTHO05D004680 4.4e-12 75.1 58 51.7
Ah.12g058940 Amaranthus hybridus HOM05D004264 ORTHO05D004680 5.8e-12 74.7 57 56.1
SEGI_36861 Sequoiadendron giganteum HOM05D004264 ORTHO05D004680 4.9e-11 71.6 58 51.7
SEGI_24150 Sequoiadendron giganteum HOM05D004264 ORTHO05D004680 8.4e-11 70.9 58 51.7
unitig_0.g2545 Utricularia gibba HOM05D004264 ORTHO05D004680 1.4e-10 70.1 57 50.9
CSS0010779 Camellia sinensis var. sinensis HOM05D004264 ORTHO05D004680 1.9e-10 69.7 115 40.0
Os04g0445400 Oryza sativa ssp. japonica HOM05D004264 ORTHO05D004680 5.4e-10 68.2 59 49.2
MBI03_g10315_MAGBIO Magnolia biondii HOM05D004264 ORTHO05D004680 7.1e-10 67.8 44 68.2
Zm00001eb068100 Zea mays HOM05D004264 ORTHO05D004680 8.7e-08 60.8 55 49.1
AT5G01570 Arabidopsis thaliana HOM05D004264 ORTHO05D004680 1.1e-07 60.5 54 50.0
BcaB04g18563 Brassica carinata HOM05D004264 ORTHO05D004680 7.3e-07 57.8 62 45.2


User provided reference genes

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