Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_21057 Corylus avellana HOM05D005958 ORTHO05D007469 1.1e-289 999.2 500 100.0
Cfa017138 Carpinus fangiana HOM05D005958 ORTHO05D007469 7.5e-193 677.6 505 73.5
TAR357G0008 Trochodendron aralioides HOM05D005958 ORTHO05D007469 2.5e-132 476.5 543 51.9
Thecc.05G009300 Theobroma cacao HOM05D005958 ORTHO05D007469 1.6e-126 457.2 531 51.0
Duzib093G1771 Durio zibethinus HOM05D005958 ORTHO05D007469 2.3e-125 453.4 545 50.1
Prupe.6G282800 Prunus persica HOM05D005958 ORTHO05D007469 2.8e-123 446.4 548 51.1
Dinv12141 Davidia involucrata HOM05D005958 ORTHO05D007469 1.8e-122 443.7 537 50.8
CiPaw.10G159900 Carya illinoinensis HOM05D005958 ORTHO05D007469 1.5e-121 440.7 516 53.1
TWI77G0943 Tripterygium wilfordii HOM05D005958 ORTHO05D007469 5.0e-120 435.6 546 49.3
TAR369G0426 Trochodendron aralioides HOM05D005958 ORTHO05D007469 6.1e-118 428.7 545 48.4
FAN05G5785 Fragaria x ananassa HOM05D005958 ORTHO05D007469 1.4e-117 427.6 550 48.0
Gohir.D09G162800 Gossypium hirsutum HOM05D005958 ORTHO05D007469 3.9e-117 426.0 543 49.0
Gorai.006G184400 Gossypium raimondii HOM05D005958 ORTHO05D007469 8.8e-117 424.9 543 49.0
CSS0015840 Camellia sinensis var. sinensis HOM05D005958 ORTHO05D007469 1.1e-116 424.5 531 48.0
CSS0028387 Camellia sinensis var. sinensis HOM05D005958 ORTHO05D007469 1.1e-116 424.5 531 48.0
Potri.016G122500 Populus trichocarpa HOM05D005958 ORTHO05D007469 2.0e-116 423.7 553 45.9
FvH4_6g10950 Fragaria vesca HOM05D005958 ORTHO05D007469 5.7e-116 422.2 550 47.3
FAN02G1060 Fragaria x ananassa HOM05D005958 ORTHO05D007469 2.2e-115 420.2 550 47.1
Gohir.A09G166900 Gossypium hirsutum HOM05D005958 ORTHO05D007469 4.8e-115 419.1 543 48.4
FAN05G4888 Fragaria x ananassa HOM05D005958 ORTHO05D007469 6.3e-115 418.7 547 47.3
FAN09G0235 Fragaria x ananassa HOM05D005958 ORTHO05D007469 3.1e-114 416.4 550 47.3
CSS0033178 Camellia sinensis var. sinensis HOM05D005958 ORTHO05D007469 7.0e-114 415.2 531 47.6
MD04G1163400 Malus domestica HOM05D005958 ORTHO05D007469 5.9e-113 412.1 541 47.5
MD12G1176900 Malus domestica HOM05D005958 ORTHO05D007469 2.2e-112 410.2 538 47.2
RcHm_v2.0_Chr3g0462231 Rosa chinensis HOM05D005958 ORTHO05D007469 5.0e-112 409.1 548 47.4
FAN14G5414 Fragaria x ananassa HOM05D005958 ORTHO05D007469 1.2e-110 404.4 541 47.0
TWI74G1578 Tripterygium wilfordii HOM05D005958 ORTHO05D007469 2.0e-108 397.1 540 45.7
Manes.08G095500 Manihot esculenta HOM05D005958 ORTHO05D007469 3.4e-108 396.4 534 45.5
MD04G1163300 Malus domestica HOM05D005958 ORTHO05D007469 1.7e-107 394.0 537 46.4
COL.COLO4_14482 Corchorus olitorius HOM05D005958 ORTHO05D007469 2.8e-107 393.3 545 46.8
Manes.09G109800 Manihot esculenta HOM05D005958 ORTHO05D007469 9.1e-106 388.3 536 46.1
Glyma.18G205100 Glycine max HOM05D005958 ORTHO05D007469 2.0e-105 387.1 554 45.7
Ciclev10011458m.g Citrus clementina HOM05D005958 ORTHO05D007469 1.7e-104 384.0 533 45.8
CSS0015551 Camellia sinensis var. sinensis HOM05D005958 ORTHO05D007469 3.2e-103 379.8 551 43.9
RcHm_v2.0_Chr3g0462211 Rosa chinensis HOM05D005958 ORTHO05D007469 3.2e-103 379.8 548 43.1
Glyma.07G154300 Glycine max HOM05D005958 ORTHO05D007469 2.7e-102 376.7 568 44.0
MD12G1177000 Malus domestica HOM05D005958 ORTHO05D007469 3.6e-102 376.3 538 44.4
Dinv04446 Davidia involucrata HOM05D005958 ORTHO05D007469 6.1e-102 375.6 422 50.9
MD12G1177200 Malus domestica HOM05D005958 ORTHO05D007469 3.0e-101 373.2 381 54.6
Gorai.012G118000 Gossypium raimondii HOM05D005958 ORTHO05D007469 6.8e-101 372.1 553 43.4
Actinidia29080 Actinidia chinensis HOM05D005958 ORTHO05D007469 2.0e-100 370.5 534 46.4
Phvul.008G094400 Phaseolus vulgaris HOM05D005958 ORTHO05D007469 7.0e-98 362.1 503 45.5
VMungo1383G1981 Vigna mungo HOM05D005958 ORTHO05D007469 3.8e-96 356.3 574 42.5
Gohir.A04G094800 Gossypium hirsutum HOM05D005958 ORTHO05D007469 1.9e-95 354.0 553 42.0
Dinv08434 Davidia involucrata HOM05D005958 ORTHO05D007469 7.2e-95 352.1 411 50.4
Dinv08437 Davidia involucrata HOM05D005958 ORTHO05D007469 2.1e-94 350.5 403 50.4
Actinidia20755 Actinidia chinensis HOM05D005958 ORTHO05D007469 6.8e-93 345.5 527 45.4
Aqoxy2G00814 Aquilegia oxysepala HOM05D005958 ORTHO05D007469 2.9e-91 340.1 560 40.7
Eucgr.A00605 Eucalyptus grandis HOM05D005958 ORTHO05D007469 8.3e-91 338.6 549 40.6
FAN05G1422 Fragaria x ananassa HOM05D005958 ORTHO05D007469 2.4e-90 337.0 545 41.5
Cc06_g00940 Coffea canephora HOM05D005958 ORTHO05D007469 4.1e-90 336.3 537 40.8
FvH4_6g10940 Fragaria vesca HOM05D005958 ORTHO05D007469 9.2e-90 335.1 541 42.9
Psat3g124280 Pisum sativum HOM05D005958 ORTHO05D007469 9.2e-90 335.1 420 47.1
Cc06_g00950 Coffea canephora HOM05D005958 ORTHO05D007469 1.2e-89 334.7 417 47.5
Gohir.D04G134450 Gossypium hirsutum HOM05D005958 ORTHO05D007469 1.6e-89 334.3 553 40.3
Glyma.03G050800 Glycine max HOM05D005958 ORTHO05D007469 2.7e-89 333.6 484 44.0
Actinidia11559 Actinidia chinensis HOM05D000026 ORTHO05D000094 3.5e-89 333.2 532 44.2
Actinidia29081 Actinidia chinensis HOM05D005958 ORTHO05D007469 4.6e-89 332.8 429 48.0
Actinidia29082 Actinidia chinensis HOM05D005958 ORTHO05D007469 1.7e-88 330.9 402 49.5
FAN02G3855 Fragaria x ananassa HOM05D005958 ORTHO05D007469 6.6e-88 328.9 528 42.0
Thecc.09G354200 Theobroma cacao HOM05D005958 ORTHO05D007469 7.3e-87 325.5 540 42.4
FAN09G1941 Fragaria x ananassa HOM05D005958 ORTHO05D007469 1.6e-86 324.3 527 41.7
TPR.G21328 Trifolium pratense HOM05D005958 ORTHO05D007469 1.6e-86 324.3 501 41.9
Medtr7g069740 Medicago truncatula HOM05D005958 ORTHO05D007469 2.1e-86 323.9 404 47.0
Nitab4.5_0010796g0010 Nicotiana tabacum HOM05D005958 ORTHO05D007469 6.8e-85 318.9 395 46.3
Ca_07677_v3 Cicer arietinum L. HOM05D005958 ORTHO05D007469 3.4e-84 316.6 381 48.0
DCAR_028875 Daucus carota HOM05D005958 ORTHO05D007469 3.4e-84 316.6 412 44.9
HanXRQChr04g0105851 Helianthus annuus HOM05D005958 ORTHO05D007469 1.3e-83 314.7 524 39.5
Lj1g0001035 Lotus japonicus HOM05D005958 ORTHO05D007469 1.3e-83 314.7 572 39.5
TWI77G0187 Tripterygium wilfordii HOM05D005958 ORTHO05D007469 4.9e-83 312.8 490 43.1
PGSC0003DMG400026643 Solanum tuberosum HOM05D005958 ORTHO05D007469 1.1e-82 311.6 547 39.7
Oeu038745.1 Olea europaea HOM05D005958 ORTHO05D007469 1.9e-82 310.8 548 39.6
MBI15_g36987_MAGBIO Magnolia biondii HOM05D005958 ORTHO05D007469 3.2e-82 310.1 531 41.2
Manes.08G095400 Manihot esculenta HOM05D005958 ORTHO05D007469 9.2e-82 308.5 489 40.7
Lsat_1_v5_gn_8_102760 Lactuca sativa HOM05D005958 ORTHO05D007469 2.0e-81 307.4 512 40.8
Solyc09g018460.1 Solanum lycopersicum HOM05D005958 ORTHO05D007469 1.0e-80 305.1 503 41.4
Sopen09g011650 Solanum pennellii HOM05D005958 ORTHO05D007469 1.3e-80 304.7 503 41.4
Oeu042662.1 Olea europaea HOM05D005958 ORTHO05D007469 1.1e-79 301.6 540 40.0
CAN.G456.8 Capsicum annuum HOM05D005958 ORTHO05D007469 5.6e-79 299.3 403 44.2
Potri.009G075500 Populus trichocarpa HOM05D005958 ORTHO05D007469 2.3e-77 293.9 446 42.2
COL.COLO4_11067 Corchorus olitorius HOM05D005958 ORTHO05D007469 4.0e-77 293.1 542 39.3
DCAR_024004 Daucus carota HOM05D005958 ORTHO05D007469 5.8e-76 289.3 555 37.3
Nitab4.5_0000230g0040 Nicotiana tabacum HOM05D005958 ORTHO05D007469 5.8e-76 289.3 506 38.9
Migut.J00119 Erythranthe guttata HOM05D005958 ORTHO05D007469 7.5e-76 288.9 537 37.4
Duzib150G1675 Durio zibethinus HOM05D005958 ORTHO05D007469 9.8e-76 288.5 563 39.3
PGR031G2865 Punica granatum HOM05D005958 ORTHO05D007469 1.3e-75 288.1 546 37.7
Lsat_1_v5_gn_9_37360 Lactuca sativa HOM05D005958 ORTHO05D007469 1.4e-74 284.6 387 42.4
DCAR_007350 Daucus carota HOM05D005958 ORTHO05D007469 2.4e-74 283.9 546 35.7
PSO801G0039 Papaver somniferum HOM05D005958 ORTHO05D007469 1.3e-72 278.1 428 42.5
ECA247G2256 Erigeron canadensis HOM05D005958 ORTHO05D007469 6.6e-72 275.8 452 39.6
Lsat_1_v5_gn_9_37380 Lactuca sativa HOM05D005958 ORTHO05D007469 1.1e-71 275.0 387 40.8
Atru.chr3.4148 Acer truncatum HOM05D005958 ORTHO05D007469 3.3e-71 273.5 541 37.7
ECA247G1750 Erigeron canadensis HOM05D005958 ORTHO05D007469 5.6e-71 272.7 529 35.2
Rhsim01G0239700 Rhododendron simsii HOM05D005958 ORTHO05D007469 2.8e-70 270.4 539 36.2
CANSAT35G2009 Cannabis sativa HOM05D005958 ORTHO05D007469 3.6e-70 270.0 468 41.7
Lsat_1_v5_gn_9_37420 Lactuca sativa HOM05D005958 ORTHO05D007469 8.1e-70 268.9 404 42.6
ECA247G0388 Erigeron canadensis HOM05D005958 ORTHO05D007469 1.2e-68 265.0 528 35.0
Manes.02G212600 Manihot esculenta HOM05D005958 ORTHO05D007469 1.5e-68 264.6 387 42.1
Actinidia23873 Actinidia chinensis HOM05D005958 ORTHO05D007469 3.4e-68 263.5 424 42.2
ECA247G0460 Erigeron canadensis HOM05D005958 ORTHO05D007469 4.4e-68 263.1 394 41.6
HanXRQChr10g0287091 Helianthus annuus HOM05D005958 ORTHO05D007469 5.8e-68 262.7 374 40.6
Lsat_1_v5_gn_9_37400 Lactuca sativa HOM05D005958 ORTHO05D007469 9.9e-68 261.9 384 41.7
SalBow4G2317 Salvia bowleyana HOM05D005958 ORTHO05D007469 3.7e-67 260.0 409 40.3
Gohir.D08G219600 Gossypium hirsutum HOM05D005958 ORTHO05D007469 6.4e-67 259.2 505 37.4
SalBow4G2100 Salvia bowleyana HOM05D005958 ORTHO05D007469 6.4e-67 259.2 409 40.1
PGR004G1314 Punica granatum HOM05D005958 ORTHO05D007469 8.4e-67 258.8 489 38.7
Gorai.004G233600 Gossypium raimondii HOM05D005958 ORTHO05D007469 3.2e-66 256.9 505 37.4
Gohir.A08G202600 Gossypium hirsutum HOM05D005958 ORTHO05D007469 1.6e-65 254.6 419 40.3
Cpa.g.sc120.45 Carica papaya HOM05D005958 ORTHO05D007469 5.1e-64 249.6 421 41.3
Actinidia34469 Actinidia chinensis HOM05D000314 ORTHO05D007469 7.3e-63 245.7 441 40.8
FAN05G3596 Fragaria x ananassa HOM05D005958 ORTHO05D007469 1.2e-62 245.0 252 52.8
Lsat_1_v5_gn_2_47641 Lactuca sativa HOM05D005958 ORTHO05D007469 1.6e-62 244.6 458 36.0
Migut.J00120 Erythranthe guttata HOM05D005958 ORTHO05D007469 4.7e-62 243.0 399 39.8
CiPaw.10G159700 Carya illinoinensis HOM05D005958 ORTHO05D007469 6.2e-62 242.7 234 61.1
HanXRQChr15g0463921 Helianthus annuus HOM05D005958 ORTHO05D007469 2.6e-60 237.3 372 41.1
HanXRQChr10g0291521 Helianthus annuus HOM05D005958 ORTHO05D007469 5.8e-60 236.1 434 38.2
GSVIVG01030305001 Vitis vinifera HOM05D005958 ORTHO05D007469 7.6e-60 235.7 339 45.1
Eucgr.K02965 Eucalyptus grandis HOM05D005958 ORTHO05D007469 2.9e-59 233.8 541 34.9
Dinv08433 Davidia involucrata HOM05D005958 ORTHO05D007469 4.8e-54 216.5 503 35.4
Atru.chr8.2303 Acer truncatum HOM05D005958 ORTHO05D007469 6.9e-53 212.6 406 41.1
Peaxi162Scf01132g00321 Petunia axillaris HOM05D005958 ORTHO05D007469 3.4e-44 183.7 497 31.0
Oeu009109.1 Olea europaea HOM05D005958 ORTHO05D007469 1.3e-38 165.2 245 40.8
Eucgr.K02964 Eucalyptus grandis HOM05D005958 ORTHO05D007469 4.8e-38 163.3 359 35.4
SalBow5G4815 Salvia bowleyana HOM05D005958 ORTHO05D007469 1.1e-37 162.2 430 33.5
ATR0174G041 Amborella trichopoda HOM05D005958 ORTHO05D007469 2.5e-34 151.0 388 33.5
Atru.chr8.2302 Acer truncatum HOM05D005958 ORTHO05D007469 1.2e-28 132.1 253 37.9
SEGI_12970 Sequoiadendron giganteum HOM05D000063 ORTHO05D006939 7.4e-15 86.3 321 26.5
Rhsim01G0239600 Rhododendron simsii HOM05D005958 ORTHO05D007469 8.2e-14 82.8 151 39.7
SEGI_24403 Sequoiadendron giganteum HOM05D000063 ORTHO05D006939 8.2e-14 82.8 426 25.6
Cpa.g.sc120.44 Carica papaya HOM05D005958 ORTHO05D007469 2.4e-13 81.3 105 44.8
SEGI_11409 Sequoiadendron giganteum HOM05D000063 ORTHO05D006939 1.2e-12 79.0 396 24.7
Potri.001G280332 Populus trichocarpa HOM05D005958 ORTHO05D007469 2.2e-11 74.7 83 49.4
CAN.G122.2 Capsicum annuum HOM05D005958 ORTHO05D007469 3.8e-11 73.9 157 34.4
ATR0681G293 Amborella trichopoda HOM05D000063 ORTHO05D038344 8.8e-08 62.8 382 22.8
Glyma.13G081700 Glycine max HOM05D000063 ORTHO05D006939 3.3e-07 60.8 181 32.6
ATR0681G236 Amborella trichopoda HOM05D000063 ORTHO05D038344 7.4e-07 59.7 400 23.0
Phvul.008G165200 Phaseolus vulgaris HOM05D000063 ORTHO05D006939 1.3e-06 58.9 180 30.6
VMungo0647G0062 Vigna mungo HOM05D000063 ORTHO05D006939 6.3e-06 56.6 183 29.0


User provided reference genes

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