Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_21041 Corylus avellana HOM05D006801 ORTHO05D008490 1.7e-96 355.9 167 100.0
Cfa017164 Carpinus fangiana HOM05D006801 ORTHO05D008490 6.2e-91 337.4 167 95.2
QL07p034435 Quercus lobata HOM05D006801 ORTHO05D008490 1.2e-86 323.2 166 91.6
TWI74G0346 Tripterygium wilfordii HOM05D006801 ORTHO05D008490 7.8e-86 320.5 167 88.6
Ciclev10012687m.g Citrus clementina HOM05D006801 ORTHO05D008490 5.1e-85 317.8 167 88.0
CiPaw.10G158900 Carya illinoinensis HOM05D006801 ORTHO05D008490 3.3e-84 315.1 168 87.5
TAR140G0003 Trochodendron aralioides HOM05D006801 ORTHO05D008490 8.1e-83 310.5 167 86.8
TAR623G0428 Trochodendron aralioides HOM05D006801 ORTHO05D008490 8.1e-83 310.5 167 86.8
Prupe.6G281700 Prunus persica HOM05D006801 ORTHO05D008490 4.0e-82 308.1 166 83.1
Manes.09G108600 Manihot esculenta HOM05D006801 ORTHO05D008490 6.8e-82 307.4 165 86.7
Cpa.g.sc120.28 Carica papaya HOM05D006801 ORTHO05D008490 2.0e-81 305.8 165 84.8
Lj2A70T41 Lonicera japonica HOM05D006801 ORTHO05D008490 3.8e-80 301.6 165 86.1
MD04G1161900 Malus domestica HOM05D006801 ORTHO05D008490 1.9e-79 299.3 166 81.9
COL.COLO4_14495 Corchorus olitorius HOM05D006801 ORTHO05D008490 5.4e-79 297.7 169 82.2
arahy.Tifrunner.gnm1.ann1.711CF1 Arachis hypogaea HOM05D006801 ORTHO05D008490 9.2e-79 297.0 170 81.2
Nitab4.5_0005348g0010 Nicotiana tabacum HOM05D006801 ORTHO05D008490 1.2e-78 296.6 164 82.9
GSVIVG01030332001 Vitis vinifera HOM05D006801 ORTHO05D008490 2.1e-78 295.8 167 82.6
arahy.Tifrunner.gnm1.ann1.SWS1EB Arachis hypogaea HOM05D006801 ORTHO05D008490 3.5e-78 295.0 170 81.2
Cc06_g01030 Coffea canephora HOM05D006801 ORTHO05D008490 8.6e-77 290.4 168 80.4
Medtr4g017650 Medicago truncatula HOM05D006801 ORTHO05D008490 1.9e-76 289.3 165 80.6
CAN.G41.4 Capsicum annuum HOM05D006801 ORTHO05D008490 2.5e-76 288.9 163 81.0
HanXRQChr10g0291491 Helianthus annuus HOM05D006801 ORTHO05D008490 2.5e-76 288.9 164 78.7
Atru.chr8.2288 Acer truncatum HOM05D006801 ORTHO05D008490 4.3e-76 288.1 162 81.5
CsaV3_3G033500 Cucumis sativus L. HOM05D006801 ORTHO05D008490 7.3e-76 287.3 163 82.8
Gohir.A04G094200 Gossypium hirsutum HOM05D006801 ORTHO05D008490 7.3e-76 287.3 164 79.9
Gorai.002G264900 Gossypium raimondii HOM05D006801 ORTHO05D008490 7.3e-76 287.3 166 77.7
Peaxi162Scf01132g00023 Petunia axillaris HOM05D006801 ORTHO05D008490 7.3e-76 287.3 164 79.3
ClCG10G022380 Citrullus lanatus HOM05D006801 ORTHO05D008490 1.2e-75 286.6 165 81.8
PGR031G3867 Punica granatum HOM05D006801 ORTHO05D008490 1.2e-75 286.6 167 81.4
Gorai.012G117400 Gossypium raimondii HOM05D006801 ORTHO05D008490 1.6e-75 286.2 164 79.3
Lsat_1_v5_gn_9_35501 Lactuca sativa HOM05D006801 ORTHO05D008490 1.6e-75 286.2 164 79.3
TPR.G8225 Trifolium pratense HOM05D006801 ORTHO05D008490 1.6e-75 286.2 165 79.4
Nn2g13198 Nelumbo nucifera HOM05D006801 ORTHO05D008490 2.1e-75 285.8 168 80.4
Gohir.A01G228300 Gossypium hirsutum HOM05D006801 ORTHO05D008490 3.6e-75 285.0 166 77.1
Psat7g243680 Pisum sativum HOM05D006801 ORTHO05D008490 4.7e-75 284.6 170 76.5
MELO3C009141.2 Cucumis melo HOM05D006801 ORTHO05D008490 6.2e-75 284.3 163 81.6
Gohir.D04G133600 Gossypium hirsutum HOM05D006801 ORTHO05D008490 8.1e-75 283.9 164 78.7
Thecc.05G010700 Theobroma cacao HOM05D006801 ORTHO05D008490 8.1e-75 283.9 164 81.1
DCAR_028865 Daucus carota HOM05D006801 ORTHO05D008490 1.8e-74 282.7 166 80.1
Eucgr.A00595 Eucalyptus grandis HOM05D006801 ORTHO05D008490 1.8e-74 282.7 167 79.6
Potri.016G121000 Populus trichocarpa HOM05D006801 ORTHO05D008490 1.8e-74 282.7 165 80.0
Oeu033563.1 Olea europaea HOM05D006801 ORTHO05D008490 2.4e-74 282.3 165 80.0
CANSAT35G1909 Cannabis sativa HOM05D006801 ORTHO05D008490 2.6e-73 278.9 168 78.6
Ca_20198_v3 Cicer arietinum L. HOM05D006801 ORTHO05D008490 2.6e-73 278.9 165 76.4
ECA247G2271 Erigeron canadensis HOM05D006801 ORTHO05D008490 3.4e-73 278.5 166 77.7
Lj3g0017579 Lotus japonicus HOM05D006801 ORTHO05D008490 5.8e-73 277.7 165 77.6
Aqoxy4G02453 Aquilegia oxysepala HOM05D006801 ORTHO05D008490 9.9e-73 276.9 168 78.6
RcHm_v2.0_Chr3g0462371 Rosa chinensis HOM05D006801 ORTHO05D008490 1.3e-72 276.6 166 77.7
MSTRG.18989 Avicennia marina HOM05D006801 ORTHO05D008490 1.7e-72 276.2 165 77.0
THA.LOC104816206 Tarenaya hassleriana HOM05D006801 ORTHO05D008490 5.4e-71 271.2 167 74.3
Lalb_Chr12g0207061 Lupinus albus HOM05D006801 ORTHO05D008490 2.1e-70 269.2 165 75.8
Phvul.010G073500 Phaseolus vulgaris HOM05D006801 ORTHO05D008490 2.1e-70 269.2 164 78.7
PSO170G1048 Papaver somniferum HOM05D006801 ORTHO05D008490 4.6e-70 268.1 167 76.0
VMungo0331G1898 Vigna mungo HOM05D006801 ORTHO05D008490 4.6e-70 268.1 166 77.7
Aa31LG1G22920 Aethionema arabicum HOM05D006801 ORTHO05D008490 6.0e-70 267.7 165 72.7
FvH4_6g11060 Fragaria vesca HOM05D006801 ORTHO05D008490 6.0e-70 267.7 167 74.9
FAN14G3154 Fragaria x ananassa HOM05D006801 ORTHO05D008490 6.0e-70 267.7 167 74.9
AUR62030790 Chenopodium quinoa HOM05D006801 ORTHO05D008490 3.9e-69 265.0 166 72.3
ECA247G3879 Erigeron canadensis HOM05D006801 ORTHO05D008490 1.5e-68 263.1 166 74.1
Sc01g0005740 Simmondsia chinensis HOM05D006801 ORTHO05D008490 1.5e-68 263.1 164 72.0
Migut.J00126 Erythranthe guttata HOM05D006801 ORTHO05D008490 3.3e-68 261.9 166 72.9
Os05g0468800 Oryza sativa ssp. japonica HOM05D006801 ORTHO05D008490 4.3e-68 261.5 168 72.6
AUR62030503 Chenopodium quinoa HOM05D006801 ORTHO05D008490 2.8e-67 258.8 166 71.7
Carub.0006s0052 Capsella rubella HOM05D006801 ORTHO05D008490 6.2e-67 257.7 165 70.3
Glyma.01G123100 Glycine max HOM05D006801 ORTHO05D008490 8.1e-67 257.3 166 73.5
EL10Ac5g12521 Beta vulgaris HOM05D006801 ORTHO05D008490 1.1e-66 256.9 166 71.1
Sp6g40620 Schrenkiella parvula HOM05D006801 ORTHO05D008490 1.8e-66 256.1 165 69.1
CSS0028234 Camellia sinensis var. sinensis HOM05D006801 ORTHO05D008490 2.4e-66 255.8 167 73.7
CARHR211660 Cardamine hirsuta HOM05D006801 ORTHO05D008490 3.1e-66 255.4 160 71.2
Sopen09g001050 Solanum pennellii HOM05D006801 ORTHO05D008490 3.1e-66 255.4 166 74.7
Solyc09g005060.3 Solanum lycopersicum HOM05D006801 ORTHO05D008490 4.0e-66 255.0 166 74.7
AL6G10870 Arabidopsis lyrata HOM05D006801 ORTHO05D008490 5.3e-66 254.6 165 70.3
Glyma.03G052200 Glycine max HOM05D006801 ORTHO05D008490 6.9e-66 254.2 166 72.3
AT5G01300 Arabidopsis thaliana HOM05D006801 ORTHO05D008490 2.0e-65 252.7 165 68.5
PSO729G0120 Papaver somniferum HOM05D006801 ORTHO05D008490 2.6e-65 252.3 170 74.7
BraA10t45402Z Brassica rapa HOM05D006801 ORTHO05D008490 3.4e-65 251.9 161 70.2
BcaC06g31972 Brassica carinata HOM05D006801 ORTHO05D008490 1.7e-64 249.6 162 69.8
PSO729G0014 Papaver somniferum HOM05D006801 ORTHO05D008490 2.2e-64 249.2 169 72.8
Ah.12g058900 Amaranthus hybridus HOM05D006801 ORTHO05D008490 3.8e-64 248.4 165 71.5
PSO724G0025 Papaver somniferum HOM05D006801 ORTHO05D008490 3.8e-64 248.4 169 72.2
SalBow5G2624 Salvia bowleyana HOM05D006801 ORTHO05D008490 6.4e-64 247.7 162 69.1
SalBow5G4248 Salvia bowleyana HOM05D006801 ORTHO05D008490 8.4e-64 247.3 162 69.1
SGA_v2.0_scaffold85G26712 Striga asiatica HOM05D000053 ORTHO05D008490 3.2e-63 245.4 162 70.4
unitig_26.g9083 Utricularia gibba HOM05D006801 ORTHO05D008490 7.9e-62 240.7 156 71.8
Medtr4g017680 Medicago truncatula HOM05D006801 ORTHO05D008490 1.1e-60 236.9 169 68.6
Lalb_Chr07g0191271 Lupinus albus HOM05D006801 ORTHO05D008490 9.6e-60 233.8 141 75.9
FAN09G2180 Fragaria x ananassa HOM05D006801 ORTHO05D008490 4.8e-59 231.5 143 73.4
MBI15_g30116_MAGBIO Magnolia biondii HOM05D006801 ORTHO05D008490 2.4e-58 229.2 142 73.9
C09p74590 Brassica napus HOM05D005640 ORTHO05D007124 4.5e-57 224.9 141 70.2
Lalb_Chr12g0207091 Lupinus albus HOM05D006801 ORTHO05D008490 4.5e-57 224.9 169 65.1
Sed0001867 Sechium edule HOM05D006801 ORTHO05D008490 9.9e-57 223.8 166 66.9
A10p33680 Brassica napus HOM05D005640 ORTHO05D007124 3.8e-56 221.9 141 69.5
Zm00001eb351790 Zea mays HOM05D006801 ORTHO05D008490 3.8e-56 221.9 171 64.3
HPP92_026978 Vanilla planifolia HOM05D006801 ORTHO05D008490 6.4e-56 221.1 167 62.9
VMungo0331G1841 Vigna mungo HOM05D006801 ORTHO05D008490 3.2e-55 218.8 169 65.1
Thhalv10014869m.g Eutrema salsugineum HOM05D006801 ORTHO05D008490 7.1e-55 217.6 166 61.4
HPP92_015418 Vanilla planifolia HOM05D006801 ORTHO05D008490 4.6e-54 214.9 167 61.1
Dinv18520 Davidia involucrata HOM05D006801 ORTHO05D008490 1.0e-53 213.8 129 79.8
Lj3g0026162 Lotus japonicus HOM05D006801 ORTHO05D008490 2.3e-53 212.6 171 63.2
Nitab4.5_0000539g0120 Nicotiana tabacum HOM05D006801 ORTHO05D008490 5.1e-53 211.5 129 75.2
SEGI_01937 Sequoiadendron giganteum HOM05D006801 ORTHO05D008490 9.6e-52 207.2 164 56.1
CSS0011838 Camellia sinensis var. sinensis HOM05D006801 ORTHO05D008490 1.6e-51 206.5 170 61.2
arahy.Tifrunner.gnm1.ann1.M4T34S Arachis hypogaea HOM05D006801 ORTHO05D008490 5.8e-49 198.0 176 59.7
Gohir.D01G218200 Gossypium hirsutum HOM05D006801 ORTHO05D008490 1.3e-48 196.8 118 74.6
Mapoly0003s0041 Marchantia polymorpha HOM05D006801 ORTHO05D008490 6.7e-45 184.5 162 53.1
SMO347G0428 Selaginella moellendorffii HOM05D006801 ORTHO05D008490 1.6e-43 179.9 162 53.1
CDE08G0176 Ceratophyllum demersum HOM05D006801 ORTHO05D008490 1.1e-42 177.2 156 57.7
CBR_g39562 Chara braunii HOM05D006801 ORTHO05D008490 1.2e-41 173.7 166 48.2
Pp3c1_41520 Physcomitrium patens HOM05D006801 ORTHO05D008490 1.4e-39 166.8 161 49.1
AagrBONN_evm.TU.Sc2ySwM_228.3494 Anthoceros agrestis HOM05D006801 ORTHO05D008490 4.6e-38 161.8 143 55.9
Ca_20197_v3 Cicer arietinum L. HOM05D006801 ORTHO05D008490 1.8e-37 159.8 168 51.2
ATR0681G271 Amborella trichopoda HOM05D006801 ORTHO05D008490 8.2e-35 151.0 86 84.9
arahy.Tifrunner.gnm1.ann1.1WC97K Arachis hypogaea HOM05D006801 ORTHO05D008490 3.4e-33 145.6 132 58.3
PGSC0003DMG400006267 Solanum tuberosum HOM05D006801 ORTHO05D008490 3.4e-33 145.6 84 81.0
Pp3c21_8040 Physcomitrium patens HOM05D006801 ORTHO05D008490 1.7e-32 143.3 156 48.7
Hma1.2p1_0501F.1_g167640 Hydrangea macrophylla HOM05D006801 ORTHO05D008490 6.5e-32 141.4 107 67.3
Prupe.1G005200 Prunus persica HOM05D006801 ORTHO05D008490 3.4e-25 119.0 153 46.4
ATR0681G235 Amborella trichopoda HOM05D006801 ORTHO05D008490 9.1e-18 94.4 51 78.4
FAN05G3081 Fragaria x ananassa HOM05D000734 ORTHO05D002223 8.8e-13 77.8 44 79.5
Actinidia20750 Actinidia chinensis HOM05D006801 ORTHO05D008490 7.5e-12 74.7 119 41.2


User provided reference genes

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