Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_20833 Corylus avellana HOM05D000257 ORTHO05D029148 1.6e-32 142.1 69 100.0
Haze_25573 Corylus avellana HOM05D000257 ORTHO05D029148 1.5e-27 125.6 63 93.7
Haze_20102 Corylus avellana HOM05D000257 ORTHO05D029148 2.0e-27 125.2 66 90.9
Haze_18327 Corylus avellana HOM05D000257 ORTHO05D007882 2.4e-25 118.2 68 82.4
Actinidia14134 Actinidia chinensis HOM05D000257 ORTHO05D007882 1.6e-21 105.5 68 72.1
CiPaw.13G146200 Carya illinoinensis HOM05D000257 ORTHO05D007882 2.1e-21 105.1 68 72.1
COL.COLO4_21166 Corchorus olitorius HOM05D000257 ORTHO05D007882 2.1e-21 105.1 68 70.6
Dinv16884 Davidia involucrata HOM05D000257 ORTHO05D007882 2.8e-21 104.8 68 70.6
TWI63G0681 Tripterygium wilfordii HOM05D000257 ORTHO05D007882 2.8e-21 104.8 68 66.2
Ciclev10008231m.g Citrus clementina HOM05D000257 ORTHO05D007882 3.6e-21 104.4 68 69.1
Duzib168G0022 Durio zibethinus HOM05D000257 ORTHO05D007882 3.6e-21 104.4 68 67.6
HanXRQChr06g0180321 Helianthus annuus HOM05D000257 ORTHO05D007882 3.6e-21 104.4 68 64.7
HanXRQChr14g0455241 Helianthus annuus HOM05D000257 ORTHO05D007882 3.6e-21 104.4 68 64.7
Thecc.09G066100 Theobroma cacao HOM05D000257 ORTHO05D007882 4.7e-21 104.0 68 70.6
VMungo0647G2131 Vigna mungo HOM05D000257 ORTHO05D007882 4.7e-21 104.0 68 66.2
Thhalv10013576m.g Eutrema salsugineum HOM05D000257 ORTHO05D007882 6.2e-21 103.6 67 71.6
Sp6g23220 Schrenkiella parvula HOM05D000257 ORTHO05D007882 6.2e-21 103.6 67 71.6
SGA_v2.0_scaffold237G43836 Striga asiatica HOM05D000257 ORTHO05D007882 6.2e-21 103.6 67 74.6
CANSAT56G0635 Cannabis sativa HOM05D000257 ORTHO05D007882 8.1e-21 103.2 68 66.2
Phvul.001G029400 Phaseolus vulgaris HOM05D000257 ORTHO05D007882 8.1e-21 103.2 68 66.2
MSTRG.6232 Avicennia marina HOM05D000257 ORTHO05D007882 1.1e-20 102.8 67 74.6
Lsat_1_v5_gn_4_37701 Lactuca sativa HOM05D000257 ORTHO05D007882 1.1e-20 102.8 68 66.2
Oeu056508.1 Olea europaea HOM05D000257 ORTHO05D007882 1.1e-20 102.8 68 70.6
Prupe.5G147200 Prunus persica HOM05D000257 ORTHO05D007882 1.1e-20 102.8 68 69.1
Aa31LG1G13450 Aethionema arabicum HOM05D000257 ORTHO05D007882 1.4e-20 102.4 67 70.1
CSS0008745 Camellia sinensis var. sinensis HOM05D000257 ORTHO05D007882 1.4e-20 102.4 68 69.1
CSS0019170 Camellia sinensis var. sinensis HOM05D000257 ORTHO05D007882 1.4e-20 102.4 68 69.1
Gohir.A06G080900 Gossypium hirsutum HOM05D000257 ORTHO05D007882 1.4e-20 102.4 68 67.6
TAR626G0079 Trochodendron aralioides HOM05D000257 ORTHO05D007882 1.8e-20 102.1 68 69.1
Gorai.010G093700 Gossypium raimondii HOM05D000257 ORTHO05D007882 3.1e-20 101.3 68 67.6
Hma1.2p1_0208F.1_g088160 Hydrangea macrophylla HOM05D000257 ORTHO05D007882 3.1e-20 101.3 68 69.1
Lj7P526T74 Lonicera japonica HOM05D000257 ORTHO05D007882 3.1e-20 101.3 68 67.6
PGR119G0414 Punica granatum HOM05D000257 ORTHO05D007882 3.1e-20 101.3 68 64.7
Glyma.08G106300 Glycine max HOM05D000257 ORTHO05D007882 5.2e-20 100.5 68 63.2
SGA_v2.0_scaffold32G13288 Striga asiatica HOM05D000257 ORTHO05D007882 5.2e-20 100.5 67 73.1
SGA_v2.0_scaffold66G22421 Striga asiatica HOM05D000257 ORTHO05D007882 5.2e-20 100.5 67 73.1
Lalb_Chr11g0063401 Lupinus albus HOM05D000257 ORTHO05D007882 6.9e-20 100.1 60 73.3
Rhsim01G0002400 Rhododendron simsii HOM05D000257 ORTHO05D007882 6.9e-20 100.1 68 66.2
ClCG09G003310 Citrullus lanatus HOM05D000257 ORTHO05D007882 8.9e-20 99.8 68 64.7
Gohir.D06G080400 Gossypium hirsutum HOM05D000257 ORTHO05D007882 1.2e-19 99.4 68 66.2
Atru.chr7.1816 Acer truncatum HOM05D000257 ORTHO05D007882 1.5e-19 99.0 68 63.2
ATR0681G227 Amborella trichopoda HOM05D000257 ORTHO05D007882 1.5e-19 99.0 68 64.7
CARHR191560 Cardamine hirsuta HOM05D000257 ORTHO05D007882 1.5e-19 99.0 67 65.7
Psat5g035840 Pisum sativum HOM05D000257 ORTHO05D007882 1.5e-19 99.0 67 64.2
arahy.Tifrunner.gnm1.ann1.W22R0G Arachis hypogaea HOM05D000257 ORTHO05D007882 2.0e-19 98.6 68 61.8
Ca_15802_v3 Cicer arietinum L. HOM05D000257 ORTHO05D007882 2.0e-19 98.6 67 64.2
Sabra06G0168100 Salix brachista HOM05D000257 ORTHO05D007882 2.0e-19 98.6 68 64.7
Aqoxy1G01909 Aquilegia oxysepala HOM05D000257 ORTHO05D007882 2.6e-19 98.2 68 64.7
Aqoxy7G00996 Aquilegia oxysepala HOM05D000257 ORTHO05D007882 2.6e-19 98.2 68 64.7
BcaC04g19529 Brassica carinata HOM05D000257 ORTHO05D007882 2.6e-19 98.2 67 67.2
C09p54700 Brassica napus HOM05D000257 ORTHO05D007882 2.6e-19 98.2 67 67.2
BolC9t58334H Brassica oleracea HOM05D000257 ORTHO05D007882 2.6e-19 98.2 67 67.2
FAN09G1036 Fragaria x ananassa HOM05D000257 ORTHO05D007882 2.6e-19 98.2 68 64.7
vmacro23463 Vaccinium macrocarpon HOM05D000257 ORTHO05D007882 2.6e-19 98.2 68 64.7
ClCG05G015930 Citrullus lanatus HOM05D000257 ORTHO05D007882 3.4e-19 97.8 67 62.7
A10p18750 Brassica napus HOM05D000257 ORTHO05D007882 4.4e-19 97.4 67 65.7
BraA10t43955Z Brassica rapa HOM05D000257 ORTHO05D007882 4.4e-19 97.4 67 65.7
GSVIVG01035500001 Vitis vinifera HOM05D000257 ORTHO05D007882 4.4e-19 97.4 58 75.9
Carub.0006s1961 Capsella rubella HOM05D000257 ORTHO05D007882 7.6e-19 96.7 67 67.2
Cc06_g13110 Coffea canephora HOM05D000257 ORTHO05D007882 7.6e-19 96.7 67 64.2
DCAR_004761 Daucus carota HOM05D000257 ORTHO05D007882 7.6e-19 96.7 68 63.2
Hund17425 Selenicereus undatus HOM05D000257 ORTHO05D007882 7.6e-19 96.7 68 64.7
FAN05G1677 Fragaria x ananassa HOM05D000257 ORTHO05D007882 9.9e-19 96.3 68 61.8
FAN05G1719 Fragaria x ananassa HOM05D000257 ORTHO05D007882 9.9e-19 96.3 68 61.8
Potri.006G218100 Populus trichocarpa HOM05D000257 ORTHO05D007882 9.9e-19 96.3 68 64.7
arahy.Tifrunner.gnm1.ann1.416NC9 Arachis hypogaea HOM05D000257 ORTHO05D007882 1.3e-18 95.9 68 60.3
BcaB08g36462 Brassica carinata HOM05D000257 ORTHO05D007882 1.7e-18 95.5 67 64.2
MD14G1152200 Malus domestica HOM05D000257 ORTHO05D007882 1.7e-18 95.5 68 63.2
AL6G32930 Arabidopsis lyrata HOM05D000257 ORTHO05D007882 2.2e-18 95.1 67 65.7
arahy.Tifrunner.gnm1.ann1.2DRB7F Arachis hypogaea HOM05D000257 ORTHO05D007882 2.2e-18 95.1 68 60.3
TPR.G21442 Trifolium pratense HOM05D000257 ORTHO05D007882 2.2e-18 95.1 67 62.7
Ah.04g159340 Amaranthus hybridus HOM05D000257 ORTHO05D007882 2.9e-18 94.7 68 63.2
CsaV3_4G036200 Cucumis sativus L. HOM05D000257 ORTHO05D007882 3.8e-18 94.4 68 58.8
Lj1g0007895 Lotus japonicus HOM05D000257 ORTHO05D007882 3.8e-18 94.4 67 58.2
Medtr0153s0070 Medicago truncatula HOM05D000257 ORTHO05D007882 3.8e-18 94.4 67 59.7
Medtr3g105530 Medicago truncatula HOM05D000257 ORTHO05D007882 3.8e-18 94.4 67 59.7
FvH4_6g20760 Fragaria vesca HOM05D000257 ORTHO05D007882 6.4e-18 93.6 68 61.8
Sed0001456 Sechium edule HOM05D000257 ORTHO05D007882 8.4e-18 93.2 68 57.4
Aqoxy6G01879 Aquilegia oxysepala HOM05D000257 ORTHO05D007882 1.1e-17 92.8 68 60.3
AT5G21970 Arabidopsis thaliana HOM05D000257 ORTHO05D007882 1.1e-17 92.8 67 64.2
MELO3C016928.2 Cucumis melo HOM05D000257 ORTHO05D007882 1.1e-17 92.8 68 58.8
EL10Ac1g01520 Beta vulgaris HOM05D000257 ORTHO05D007882 1.4e-17 92.4 68 58.8
AUR62013550 Chenopodium quinoa HOM05D000257 ORTHO05D007882 1.4e-17 92.4 68 60.3
AUR62037994 Chenopodium quinoa HOM05D000257 ORTHO05D007882 1.4e-17 92.4 68 60.3
FAN02G1740 Fragaria x ananassa HOM05D000257 ORTHO05D007882 1.4e-17 92.4 68 61.8
Sc02g0004200 Simmondsia chinensis HOM05D000257 ORTHO05D007882 1.9e-17 92.0 68 61.8
Nitab4.5_0006606g0010 Nicotiana tabacum HOM05D000257 ORTHO05D007882 2.4e-17 91.7 67 62.7
FAN14G5499 Fragaria x ananassa HOM05D000257 ORTHO05D007882 3.2e-17 91.3 68 60.3
Nitab4.5_0011152g0010 Nicotiana tabacum HOM05D000257 ORTHO05D007882 3.2e-17 91.3 67 62.7
Manes.03G056000 Manihot esculenta HOM05D000257 ORTHO05D007882 4.2e-17 90.9 68 60.3
Nitab4.5_0000055g0230 Nicotiana tabacum HOM05D000257 ORTHO05D007882 4.2e-17 90.9 60 68.3
unitig_37.g12760 Utricularia gibba HOM05D000257 ORTHO05D007882 5.4e-17 90.5 67 59.7
CAN.G100.79 Capsicum annuum HOM05D000257 ORTHO05D007882 7.1e-17 90.1 67 59.7
Peaxi162Scf01054g00016 Petunia axillaris HOM05D000257 ORTHO05D007882 7.1e-17 90.1 67 59.7
Migut.J01495 Erythranthe guttata HOM05D000257 ORTHO05D007882 1.6e-16 89.0 67 62.7
PGSC0003DMG400009010 Solanum tuberosum HOM05D000257 ORTHO05D007882 2.1e-16 88.6 60 65.0
MBI16_g25135_MAGBIO Magnolia biondii HOM05D000257 ORTHO05D007882 2.7e-16 88.2 58 65.5
CDE05G3488 Ceratophyllum demersum HOM05D000736 ORTHO05D007882 4.6e-16 87.4 68 55.9
HPP92_005718 Vanilla planifolia HOM05D000257 ORTHO05D007882 4.6e-16 87.4 68 54.4
AUR62037996 Chenopodium quinoa HOM05D000257 ORTHO05D007882 6.0e-16 87.0 58 63.8
Solyc01g079430.2 Solanum lycopersicum HOM05D000257 ORTHO05D007882 6.0e-16 87.0 60 63.3
Sopen01g031210 Solanum pennellii HOM05D000257 ORTHO05D007882 6.0e-16 87.0 60 63.3
RcHm_v2.0_Chr3g0476651 Rosa chinensis HOM05D000257 ORTHO05D007882 3.3e-14 81.3 59 59.3
SHI17973 Sapria himalayana HOM05D000257 ORTHO05D007882 7.3e-14 80.1 68 52.9
Glyma.05G149600 Glycine max HOM05D000257 ORTHO05D007882 1.7e-10 68.9 48 56.2
SEGI_00600 Sequoiadendron giganteum HOM05D000257 ORTHO05D007882 4.9e-10 67.4 68 45.6
Os11g0544300 Oryza sativa ssp. japonica HOM05D000257 ORTHO05D007882 6.0e-08 60.5 68 38.2
Os03g0181400 Oryza sativa ssp. japonica HOM05D000257 ORTHO05D007882 3.0e-07 58.2 68 36.8


User provided reference genes

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