Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_20783 Corylus avellana HOM05D005967 ORTHO05D005174 2.8e-62 242.3 174 100.0
Cfa017389 Carpinus fangiana HOM05D005967 ORTHO05D005174 5.9e-36 154.8 162 66.7
QL07p048152 Quercus lobata HOM05D005967 ORTHO05D005174 7.5e-15 84.7 170 36.5
Duzib106G1613 Durio zibethinus HOM05D005967 ORTHO05D005174 1.1e-10 70.9 163 33.7
Dinv37179 Davidia involucrata HOM05D005967 ORTHO05D005174 2.5e-10 69.7 160 33.8
Manes.09G089000 Manihot esculenta HOM05D005967 ORTHO05D005174 1.6e-09 67.0 158 35.4
Thecc.05G040600 Theobroma cacao HOM05D005967 ORTHO05D005174 1.6e-09 67.0 153 33.3
Duzib093G0486 Durio zibethinus HOM05D005967 ORTHO05D005174 2.1e-09 66.6 159 32.7
Lj3g0001714 Lotus japonicus HOM05D005967 ORTHO05D005174 2.8e-09 66.2 40 72.5
Hma1.2p1_1513F.1_g288050 Hydrangea macrophylla HOM05D005967 ORTHO05D005174 1.8e-08 63.5 160 32.5
Haze_24086 Corylus avellana HOM05D005967 ORTHO05D005174 4.0e-08 62.4 43 72.1
Potri.009G030200 Populus trichocarpa HOM05D005967 ORTHO05D005174 4.0e-08 62.4 43 69.8
Aqoxy4G02913 Aquilegia oxysepala HOM05D005967 ORTHO05D005174 5.2e-08 62.0 55 58.2
Gohir.D01G212200 Gossypium hirsutum HOM05D005967 ORTHO05D005174 6.8e-08 61.6 28 92.9
Gorai.002G258000 Gossypium raimondii HOM05D005967 ORTHO05D005174 6.8e-08 61.6 28 92.9
Aqoxy2G02105 Aquilegia oxysepala HOM05D005967 ORTHO05D005174 8.9e-08 61.2 49 63.3
Manes.11G131200 Manihot esculenta HOM05D005967 ORTHO05D005174 8.9e-08 61.2 174 30.5
Nn5g26925 Nelumbo nucifera HOM05D005967 ORTHO05D005174 8.9e-08 61.2 163 38.0
Cfa011491 Carpinus fangiana HOM05D005967 ORTHO05D005174 1.2e-07 60.8 43 69.8
TPR.G5598 Trifolium pratense HOM05D005967 ORTHO05D005174 2.6e-07 59.7 41 61.0
TWI53G1171 Tripterygium wilfordii HOM05D005967 ORTHO05D005174 2.6e-07 59.7 33 81.8
TAR623G0987 Trochodendron aralioides HOM05D005967 ORTHO05D005174 2.6e-07 59.7 161 31.7
Gohir.A01G222700 Gossypium hirsutum HOM05D005967 ORTHO05D005174 3.4e-07 59.3 32 81.2
Duzib168G1635 Durio zibethinus HOM05D005967 ORTHO05D005174 4.4e-07 58.9 171 29.2
Eucgr.A01260 Eucalyptus grandis HOM05D005967 ORTHO05D005174 5.8e-07 58.5 40 65.0
TWI31G0692 Tripterygium wilfordii HOM05D005967 ORTHO05D005174 5.8e-07 58.5 42 61.9
Oeu007791.1 Olea europaea HOM05D005967 ORTHO05D005174 7.5e-07 58.2 28 89.3
Glyma.08G358900 Glycine max HOM05D005967 ORTHO05D005174 9.8e-07 57.8 34 79.4
Glyma.18G177800 Glycine max HOM05D005967 ORTHO05D005174 9.8e-07 57.8 33 78.8
Oeu036150.1 Olea europaea HOM05D005967 ORTHO05D005174 9.8e-07 57.8 39 64.1
Hma1.2p1_1829F.1_g304460 Hydrangea macrophylla HOM05D005967 ORTHO05D005174 1.3e-06 57.4 29 79.3
Oeu038352.1 Olea europaea HOM05D005967 ORTHO05D005174 1.3e-06 57.4 35 77.1
Phvul.008G100200 Phaseolus vulgaris HOM05D005967 ORTHO05D005174 1.3e-06 57.4 33 81.8
Sabra09G0021100 Salix brachista HOM05D005967 ORTHO05D005174 1.3e-06 57.4 42 66.7
CiPaw.13G095300 Carya illinoinensis HOM05D005967 ORTHO05D005174 1.7e-06 57.0 42 69.0
Duzib150G1094 Durio zibethinus HOM05D005967 ORTHO05D005174 1.7e-06 57.0 43 65.1
Oeu036152.1 Olea europaea HOM05D005967 ORTHO05D005174 1.7e-06 57.0 38 65.8
Manes.04G034400 Manihot esculenta HOM05D005967 ORTHO05D005174 2.2e-06 56.6 43 65.1
Potri.001G239000 Populus trichocarpa HOM05D005967 ORTHO05D005174 2.2e-06 56.6 165 29.7
VMungo1383G3210 Vigna mungo HOM05D005967 ORTHO05D005174 2.2e-06 56.6 158 44.3
Gohir.D04G121000 Gossypium hirsutum HOM05D005967 ORTHO05D005174 2.9e-06 56.2 39 64.1
Gorai.012G103600 Gossypium raimondii HOM05D005967 ORTHO05D005174 2.9e-06 56.2 39 64.1
Oeu024352.1 Olea europaea HOM05D005967 ORTHO05D005174 3.7e-06 55.8 37 75.7
QL01p032269 Quercus lobata HOM05D005967 ORTHO05D005174 4.9e-06 55.5 169 35.5
SalBow3G2287 Salvia bowleyana HOM05D005967 ORTHO05D005174 4.9e-06 55.5 29 79.3
vmacro20146 Vaccinium macrocarpon HOM05D005967 ORTHO05D005174 4.9e-06 55.5 33 72.7
Dinv12413 Davidia involucrata HOM05D005967 ORTHO05D005174 6.4e-06 55.1 42 64.3
Gohir.A07G098000 Gossypium hirsutum HOM05D005967 ORTHO05D005174 6.4e-06 55.1 44 65.9


User provided reference genes

Program Settings