Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_20630 Corylus avellana HOM05D007360 ORTHO05D008235 2.7e-239 831.6 435 100.0
Cfa017520 Carpinus fangiana HOM05D007360 ORTHO05D008235 2.3e-206 722.2 450 87.8
QL07p045105 Quercus lobata HOM05D007360 ORTHO05D008235 1.7e-116 423.7 450 62.2
CiPaw.09G179100 Carya illinoinensis HOM05D007360 ORTHO05D008235 1.4e-113 414.1 456 59.4
Thecc.05G055700 Theobroma cacao HOM05D007360 ORTHO05D008235 2.9e-92 343.2 452 52.4
Duzib128G1437 Durio zibethinus HOM05D007360 ORTHO05D008235 1.7e-87 327.4 449 51.7
Cpa.g.sc174.13 Carica papaya HOM05D007360 ORTHO05D008235 9.1e-86 321.6 460 48.3
COL.COLO4_27062 Corchorus olitorius HOM05D007360 ORTHO05D008235 2.7e-85 320.1 453 49.9
Prupe.6G240300 Prunus persica HOM05D007360 ORTHO05D008235 3.5e-85 319.7 451 49.9
TWI74G1131 Tripterygium wilfordii HOM05D007360 ORTHO05D008235 1.0e-84 318.2 447 49.7
Ciclev10011834m.g Citrus clementina HOM05D007360 ORTHO05D008235 5.5e-83 312.4 452 48.2
Duzib093G0075 Durio zibethinus HOM05D007360 ORTHO05D008235 9.4e-83 311.6 412 53.4
CsaV3_3G035660 Cucumis sativus L. HOM05D007360 ORTHO05D008235 4.7e-82 309.3 469 45.8
ClCG10G020460 Citrullus lanatus HOM05D007360 ORTHO05D008235 6.1e-82 308.9 478 45.4
Dinv35727 Davidia involucrata HOM05D007360 ORTHO05D008235 1.8e-81 307.4 420 52.1
Atru.chr8.1896 Acer truncatum HOM05D007360 ORTHO05D008235 4.4e-80 302.8 456 50.0
PGR004G0580 Punica granatum HOM05D007360 ORTHO05D008235 2.2e-79 300.4 455 47.5
TAR633G0942 Trochodendron aralioides HOM05D007360 ORTHO05D008235 2.2e-79 300.4 507 45.0
Potri.006G130600 Populus trichocarpa HOM05D007360 ORTHO05D008235 7.7e-77 292.0 445 45.2
Gohir.D04G115000 Gossypium hirsutum HOM05D007360 ORTHO05D008235 1.0e-76 291.6 417 48.9
Gorai.009G419600 Gossypium raimondii HOM05D007360 ORTHO05D008235 3.8e-76 289.7 417 49.2
vmacro20051 Vaccinium macrocarpon HOM05D007360 ORTHO05D008235 5.5e-75 285.8 455 45.7
FvH4_6g15500 Fragaria vesca HOM05D007360 ORTHO05D008235 9.5e-75 285.0 449 45.7
Gohir.A04G075900 Gossypium hirsutum HOM05D007360 ORTHO05D008235 3.6e-74 283.1 417 49.2
MELO3C009325.2 Cucumis melo HOM05D007360 ORTHO05D008235 8.9e-73 278.5 432 46.1
Actinidia19699 Actinidia chinensis HOM05D007360 ORTHO05D008235 3.4e-72 276.6 505 43.2
Hma1.2p1_0111F.1_g053990 Hydrangea macrophylla HOM05D007360 ORTHO05D008235 1.7e-71 274.2 446 45.5
CANSAT80G2624 Cannabis sativa HOM05D007360 ORTHO05D008235 2.2e-71 273.9 454 46.7
FAN14G4542 Fragaria x ananassa HOM05D007360 ORTHO05D008235 8.0e-66 255.4 477 41.5
RcHm_v2.0_Chr3g0469001 Rosa chinensis HOM05D007360 ORTHO05D008235 1.0e-65 255.0 413 46.0
Manes.08G004115 Manihot esculenta HOM05D007360 ORTHO05D008235 2.3e-65 253.8 420 46.2
Manes.12G045236 Manihot esculenta HOM05D007360 ORTHO05D008235 3.4e-64 250.0 425 44.9
Manes.08G004904 Manihot esculenta HOM05D007360 ORTHO05D008235 2.9e-63 246.9 404 45.8
Nn2g13027 Nelumbo nucifera HOM05D007360 ORTHO05D008235 1.9e-62 244.2 445 41.8
Nitab4.5_0006156g0020 Nicotiana tabacum HOM05D007360 ORTHO05D008235 4.1e-62 243.0 480 40.2
Manes.08G004112 Manihot esculenta HOM05D007360 ORTHO05D008235 5.4e-62 242.7 423 44.4
FAN05G5130 Fragaria x ananassa HOM05D007360 ORTHO05D008235 7.0e-62 242.3 460 43.0
FAN02G3036 Fragaria x ananassa HOM05D007360 ORTHO05D008235 4.6e-61 239.6 467 41.1
Manes.08G004132 Manihot esculenta HOM05D007360 ORTHO05D008235 1.3e-60 238.0 422 44.3
Manes.05G197400 Manihot esculenta HOM05D007360 ORTHO05D008235 2.3e-60 237.3 410 45.1
Nitab4.5_0000669g0130 Nicotiana tabacum HOM05D007360 ORTHO05D008235 2.3e-60 237.3 479 39.0
Manes.08G004125 Manihot esculenta HOM05D007360 ORTHO05D008235 6.6e-60 235.7 421 42.8
Manes.08G014114 Manihot esculenta HOM05D007360 ORTHO05D008235 6.6e-60 235.7 423 43.7
Solyc09g007460.4 Solanum lycopersicum HOM05D007360 ORTHO05D008235 2.5e-59 233.8 390 45.1
EL10Ac7g16510 Beta vulgaris HOM05D007360 ORTHO05D008235 3.3e-59 233.4 439 42.1
Sopen09g002350 Solanum pennellii HOM05D007360 ORTHO05D008235 7.3e-59 232.3 390 44.4
Manes.08G004103 Manihot esculenta HOM05D007360 ORTHO05D008235 9.5e-59 231.9 421 43.7
Sc20g0005120 Simmondsia chinensis HOM05D007360 ORTHO05D008235 1.6e-58 231.1 418 42.6
Oeu060091.1 Olea europaea HOM05D007360 ORTHO05D008235 2.1e-58 230.7 424 44.8
Cc06_g03670 Coffea canephora HOM05D007360 ORTHO05D008235 2.8e-58 230.3 480 39.4
Glyma.13G137900 Glycine max HOM05D007360 ORTHO05D008235 2.8e-58 230.3 455 40.7
PGSC0003DMG400001741 Solanum tuberosum HOM05D007360 ORTHO05D008235 2.8e-58 230.3 503 38.4
FAN09G4144 Fragaria x ananassa HOM05D007360 ORTHO05D008235 3.6e-58 229.9 271 53.1
Manes.08G004107 Manihot esculenta HOM05D007360 ORTHO05D008235 3.1e-57 226.9 445 40.9
Manes.08G004130 Manihot esculenta HOM05D007360 ORTHO05D008235 3.4e-56 223.4 394 44.4
Manes.08G004118 Manihot esculenta HOM05D007360 ORTHO05D008235 1.3e-55 221.5 448 41.5
Glyma.10G050400 Glycine max HOM05D007360 ORTHO05D008235 3.7e-55 219.9 450 40.0
Phvul.007G164700 Phaseolus vulgaris HOM05D007360 ORTHO05D008235 6.4e-55 219.2 442 38.9
Lalb_Chr02g0156301 Lupinus albus HOM05D007360 ORTHO05D008235 1.9e-54 217.6 446 39.9
Peaxi162Scf00005g04017 Petunia axillaris HOM05D007360 ORTHO05D008235 3.2e-54 216.9 453 38.4
THA.LOC104816327 Tarenaya hassleriana HOM05D007360 ORTHO05D008235 8.6e-52 208.8 466 39.1
Lsat_1_v5_gn_6_30100 Lactuca sativa HOM05D007360 ORTHO05D008235 1.2e-50 204.9 440 37.7
Migut.L01667 Erythranthe guttata HOM05D007360 ORTHO05D008235 8.1e-50 202.2 444 39.2
Sopen00g009140 Solanum pennellii HOM05D007360 ORTHO05D008235 1.1e-49 201.8 274 47.4
AT3G09730 Arabidopsis thaliana HOM05D007360 ORTHO05D008235 4.0e-49 199.9 475 37.9
Sed0020725 Sechium edule HOM05D007360 ORTHO05D008235 8.9e-49 198.7 316 45.6
AL3G20950 Arabidopsis lyrata HOM05D007360 ORTHO05D008235 2.6e-48 197.2 463 39.3
BolC1t05436H Brassica oleracea HOM05D007360 ORTHO05D008235 9.9e-48 195.3 459 38.8
Sabra06G0102600 Salix brachista HOM05D007360 ORTHO05D008235 1.7e-47 194.5 448 37.9
SGA_v2.0_scaffold126G33907 Striga asiatica HOM05D007360 ORTHO05D008235 4.9e-47 193.0 448 37.9
VMungo0720G0507 Vigna mungo HOM05D007360 ORTHO05D008235 5.4e-46 189.5 252 50.4
Carub.0003s0882 Capsella rubella HOM05D007360 ORTHO05D008235 2.7e-45 187.2 470 37.2
Sp3g08070 Schrenkiella parvula HOM05D007360 ORTHO05D008235 1.0e-44 185.3 461 37.3
Lalb_Chr21g0314721 Lupinus albus HOM05D007360 ORTHO05D008235 1.7e-44 184.5 455 37.1
Thhalv10020860m.g Eutrema salsugineum HOM05D007360 ORTHO05D008235 3.0e-44 183.7 464 36.6
ECA233G0563 Erigeron canadensis HOM05D007360 ORTHO05D008235 3.9e-44 183.3 421 35.9
Lj1g0018826 Lotus japonicus HOM05D007360 ORTHO05D008235 6.6e-44 182.6 246 49.2
BraA01t04285Z Brassica rapa HOM05D007360 ORTHO05D008235 1.2e-42 178.3 459 38.3
MD04G1105400 Malus domestica HOM05D007360 ORTHO05D008235 2.1e-42 177.6 263 50.2
Ah.08g211880 Amaranthus hybridus HOM05D007360 ORTHO05D008235 2.8e-42 177.2 309 42.4
Manes.08G004119 Manihot esculenta HOM05D007360 ORTHO05D008235 5.2e-41 172.9 296 47.0
A01p42170 Brassica napus HOM05D007360 ORTHO05D008235 6.8e-41 172.6 431 39.0
Manes.05G196900 Manihot esculenta HOM05D007360 ORTHO05D008235 3.4e-40 170.2 271 44.3
CARHR084150 Cardamine hirsuta HOM05D007360 ORTHO05D008235 4.4e-40 169.9 445 36.4
DCAR_020845 Daucus carota HOM05D007360 ORTHO05D008235 4.9e-39 166.4 409 35.7
CSS0042376 Camellia sinensis var. sinensis HOM05D007360 ORTHO05D008235 1.1e-38 165.2 518 34.7
Aqoxy4G03227 Aquilegia oxysepala HOM05D007360 ORTHO05D008235 5.4e-38 162.9 372 39.0
Lj5g0015354 Lotus japonicus HOM05D007360 ORTHO05D008235 7.3e-35 152.5 315 39.0
MSTRG.10303 Avicennia marina HOM05D007360 ORTHO05D008235 9.6e-35 152.1 309 40.5
GSVIVG01025644001 Vitis vinifera HOM05D004499 ORTHO05D004928 2.1e-29 134.4 114 59.6
Aa31LG3G2160 Aethionema arabicum HOM05D007360 ORTHO05D008235 1.1e-25 122.1 379 35.4
MD12G1122600 Malus domestica HOM05D007360 ORTHO05D008235 1.2e-24 118.6 144 48.6
HanXRQChr02g0051971 Helianthus annuus HOM05D007360 ORTHO05D008235 8.4e-23 112.5 292 37.0
Phvul.001G175350 Phaseolus vulgaris HOM05D007360 ORTHO05D008235 1.3e-18 98.6 242 35.1
HanXRQChr02g0051981 Helianthus annuus HOM05D007360 ORTHO05D008235 5.7e-11 73.2 130 42.3
Hund20189 Selenicereus undatus HOM05D007360 ORTHO05D008235 3.7e-10 70.5 70 52.9
Oeu018558.1 Olea europaea HOM05D007360 ORTHO05D008235 1.1e-09 68.9 108 42.6
AagrBONN_evm.TU.Sc2ySwM_228.3362 Anthoceros agrestis HOM05D018912 ORTHO05D021275 2.0e-08 64.7 334 26.0
MD04G1102800 Malus domestica HOM05D007360 ORTHO05D008235 2.0e-08 64.7 167 40.1
Oeu030218.3 Olea europaea HOM05D005497 ORTHO05D006733 2.0e-08 64.7 276 29.3
Oeu063812.1 Olea europaea HOM05D007360 ORTHO05D008235 2.0e-08 64.7 108 42.6
Manes.09G079705 Manihot esculenta HOM05D007360 ORTHO05D008235 2.6e-08 64.3 51 66.7
Actinidia04644 Actinidia chinensis HOM05D007360 ORTHO05D008235 1.3e-07 62.0 58 58.6
Actinidia14388 Actinidia chinensis HOM05D004499 ORTHO05D004928 1.3e-07 62.0 58 58.6
Actinidia28468 Actinidia chinensis HOM05D007360 ORTHO05D008235 1.3e-07 62.0 58 58.6
Actinidia33720 Actinidia chinensis HOM05D007360 ORTHO05D008235 1.3e-07 62.0 58 58.6
Haze_21422 Corylus avellana HOM05D005497 ORTHO05D006733 2.9e-07 60.8 311 27.0
ClCG05G016330 Citrullus lanatus HOM05D005497 ORTHO05D006733 6.5e-07 59.7 255 28.2
MELO3C016964.2 Cucumis melo HOM05D005497 ORTHO05D006733 6.5e-07 59.7 255 28.2
Nn8g39874 Nelumbo nucifera HOM05D005497 ORTHO05D006733 2.5e-06 57.8 325 26.5
FAN15G1151 Fragaria x ananassa HOM05D005497 ORTHO05D006733 3.2e-06 57.4 262 24.4
SEGI_31561 Sequoiadendron giganteum HOM05D007360 ORTHO05D008235 4.2e-06 57.0 339 23.9
SEGI_35614 Sequoiadendron giganteum HOM05D003672 ORTHO05D004121 4.2e-06 57.0 276 23.6
Pp3c12_23920 Physcomitrium patens HOM05D018912 ORTHO05D021275 5.5e-06 56.6 270 24.8
Sed0001000 Sechium edule HOM05D005497 ORTHO05D006733 5.5e-06 56.6 301 26.2
Nn8g39876 Nelumbo nucifera HOM05D005497 ORTHO05D006733 7.2e-06 56.2 250 27.2
SMO116G0351 Selaginella moellendorffii HOM05D005497 ORTHO05D006733 9.3e-06 55.8 189 29.6


User provided reference genes

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