Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_20529 Corylus avellana HOM05D006298 ORTHO05D008167 3.4e-144 515.0 260 100.0
Cfa017623 Carpinus fangiana HOM05D006298 ORTHO05D008167 1.9e-126 456.1 260 90.0
CiPaw.09G171800 Carya illinoinensis HOM05D006298 ORTHO05D008167 1.7e-108 396.4 260 79.2
QL07p043135 Quercus lobata HOM05D006298 ORTHO05D008167 3.0e-100 369.0 261 74.3
TAR623G0635 Trochodendron aralioides HOM05D006298 ORTHO05D008167 1.7e-95 353.2 264 70.8
Potri.016G099300 Populus trichocarpa HOM05D006298 ORTHO05D008167 3.8e-95 352.1 261 70.9
Prupe.7G128900 Prunus persica HOM05D006298 ORTHO05D008167 8.4e-95 350.9 263 73.4
Cpa.g.sc102.32 Carica papaya HOM05D006298 ORTHO05D008167 1.1e-94 350.5 263 71.5
Sabra16G0098900 Salix brachista HOM05D006298 ORTHO05D008167 1.6e-93 346.7 261 70.1
Manes.08G011200 Manihot esculenta HOM05D006298 ORTHO05D008167 3.5e-93 345.5 268 69.0
TWI53G1706 Tripterygium wilfordii HOM05D006298 ORTHO05D008167 4.6e-93 345.1 264 71.2
COL.COLO4_26951 Corchorus olitorius HOM05D006298 ORTHO05D008167 1.3e-92 343.6 261 69.3
Gohir.D01G130400 Gossypium hirsutum HOM05D006298 ORTHO05D008167 5.1e-92 341.7 262 69.1
Gorai.002G161800 Gossypium raimondii HOM05D006298 ORTHO05D008167 5.1e-92 341.7 262 69.1
VMungo0720G2332 Vigna mungo HOM05D006298 ORTHO05D008167 8.7e-92 340.9 262 70.6
ClCG10G020070 Citrullus lanatus HOM05D006298 ORTHO05D008167 1.5e-91 340.1 263 70.0
Gohir.A01G141763 Gossypium hirsutum HOM05D006298 ORTHO05D008167 9.6e-91 337.4 262 68.7
CsaV3_3G036020 Cucumis sativus L. HOM05D006298 ORTHO05D008167 4.8e-90 335.1 262 69.8
Thecc.05G068100 Theobroma cacao HOM05D006298 ORTHO05D008167 8.1e-90 334.3 260 68.5
CSS0011355 Camellia sinensis var. sinensis HOM05D006298 ORTHO05D008167 1.4e-89 333.6 266 67.7
MD04G1092500 Malus domestica HOM05D006298 ORTHO05D008167 1.4e-89 333.6 262 68.3
TWI77G0409 Tripterygium wilfordii HOM05D006298 ORTHO05D008167 1.4e-89 333.6 264 68.9
Phvul.007G147500 Phaseolus vulgaris HOM05D006298 ORTHO05D008167 3.1e-89 332.4 262 69.1
PGR142G1273 Punica granatum HOM05D006298 ORTHO05D008167 1.2e-88 330.5 255 71.0
GSVIVG01033647001 Vitis vinifera HOM05D006298 ORTHO05D008167 1.5e-88 330.1 261 69.3
Ciclev10012651m.g Citrus clementina HOM05D006298 ORTHO05D008167 5.8e-88 328.2 264 69.7
Hma1.2p1_0205F.1_g086920 Hydrangea macrophylla HOM05D006298 ORTHO05D008167 9.9e-88 327.4 265 67.9
CSS0035285 Camellia sinensis var. sinensis HOM05D006298 ORTHO05D008167 1.3e-87 327.0 267 67.4
Eucgr.K02926 Eucalyptus grandis HOM05D006298 ORTHO05D008167 1.7e-87 326.6 269 66.2
Rhsim03G0091000 Rhododendron simsii HOM05D006298 ORTHO05D008167 1.7e-87 326.6 265 67.5
Lj4g0025039 Lotus japonicus HOM05D006298 ORTHO05D008167 3.8e-87 325.5 267 67.0
Actinidia08768 Actinidia chinensis HOM05D006298 ORTHO05D008167 4.9e-87 325.1 267 67.0
Duzib106G2039 Durio zibethinus HOM05D006298 ORTHO05D008167 4.9e-87 325.1 258 68.2
Oeu053684.1 Olea europaea HOM05D006298 ORTHO05D008167 6.4e-87 324.7 264 66.3
Ca_11509_v3 Cicer arietinum L. HOM05D006298 ORTHO05D008167 1.1e-86 323.9 265 68.7
FAN05G1999 Fragaria x ananassa HOM05D006298 ORTHO05D008167 1.6e-85 320.1 261 69.0
FAN05G2800 Fragaria x ananassa HOM05D006298 ORTHO05D008167 1.6e-85 320.1 261 69.0
Aqoxy1G01145 Aquilegia oxysepala HOM05D006298 ORTHO05D008167 2.1e-85 319.7 272 66.9
Cc06_g04290 Coffea canephora HOM05D006298 ORTHO05D008167 2.7e-85 319.3 264 64.0
FvH4_6g16470 Fragaria vesca HOM05D006298 ORTHO05D008167 2.7e-85 319.3 249 69.5
FAN14G4061 Fragaria x ananassa HOM05D006298 ORTHO05D008167 2.7e-85 319.3 249 69.5
Sed0010557 Sechium edule HOM05D006298 ORTHO05D008167 2.7e-85 319.3 263 68.8
FAN02G1782 Fragaria x ananassa HOM05D006298 ORTHO05D008167 3.5e-85 318.9 262 69.1
RcHm_v2.0_Chr3g0470361 Rosa chinensis HOM05D006298 ORTHO05D008167 1.3e-84 317.0 261 67.8
THA.LOC104807061 Tarenaya hassleriana HOM05D006298 ORTHO05D008167 1.3e-84 317.0 261 65.9
FAN09G1272 Fragaria x ananassa HOM05D006298 ORTHO05D008167 5.1e-84 315.1 261 69.0
Lj2A120T46 Lonicera japonica HOM05D006298 ORTHO05D008167 1.1e-83 313.9 265 64.9
Sp4g19190 Schrenkiella parvula HOM05D006298 ORTHO05D008167 1.5e-83 313.5 262 63.7
CANSAT80G2892 Cannabis sativa HOM05D006298 ORTHO05D008167 1.3e-82 310.5 263 67.7
Aa31LG5G22130 Aethionema arabicum HOM05D006298 ORTHO05D008167 2.1e-82 309.7 260 62.7
Lalb_Chr21g0315031 Lupinus albus HOM05D006298 ORTHO05D008167 2.8e-82 309.3 262 65.6
Thhalv10017183m.g Eutrema salsugineum HOM05D006298 ORTHO05D008167 1.1e-81 307.4 261 62.8
Actinidia28907 Actinidia chinensis HOM05D006298 ORTHO05D008167 1.4e-81 307.0 308 57.8
TPR.G11270 Trifolium pratense HOM05D006298 ORTHO05D008167 1.4e-81 307.0 264 65.2
DCAR_017674 Daucus carota HOM05D006298 ORTHO05D008167 2.6e-80 302.8 266 63.5
THA.LOC104805233 Tarenaya hassleriana HOM05D006298 ORTHO05D008167 1.3e-79 300.4 290 59.0
Glyma.10G054900 Glycine max HOM05D006298 ORTHO05D008167 4.9e-79 298.5 262 64.5
Psat6g073640 Pisum sativum HOM05D006298 ORTHO05D008167 4.9e-79 298.5 204 71.6
Glyma.13G142000 Glycine max HOM05D006298 ORTHO05D008167 1.1e-78 297.4 186 78.5
arahy.Tifrunner.gnm1.ann1.GSM08A Arachis hypogaea HOM05D006298 ORTHO05D008167 1.9e-78 296.6 263 63.5
arahy.Tifrunner.gnm1.ann1.UZM884 Arachis hypogaea HOM05D006298 ORTHO05D008167 1.9e-78 296.6 263 63.5
BcaB06g28958 Brassica carinata HOM05D006298 ORTHO05D008167 1.9e-78 296.6 260 63.8
Migut.J00651 Erythranthe guttata HOM05D006298 ORTHO05D008167 7.1e-78 294.7 265 62.3
PSO339G0145 Papaver somniferum HOM05D006298 ORTHO05D008167 1.0e-76 290.8 264 59.8
Nitab4.5_0000063g0130 Nicotiana tabacum HOM05D006298 ORTHO05D008167 1.8e-76 290.0 257 61.9
HPP92_022584 Vanilla planifolia HOM05D006298 ORTHO05D008167 2.3e-76 289.7 264 59.1
Carub.0004s1875 Capsella rubella HOM05D006298 ORTHO05D008167 3.9e-76 288.9 261 60.2
CDE04G2630 Ceratophyllum demersum HOM05D006298 ORTHO05D008167 6.7e-76 288.1 266 58.6
Nitab4.5_0000814g0050 Nicotiana tabacum HOM05D006298 ORTHO05D008167 6.7e-76 288.1 267 58.8
PSO063G5537 Papaver somniferum HOM05D006298 ORTHO05D008167 6.7e-76 288.1 264 60.2
SGA_v2.0_scaffold40G15525 Striga asiatica HOM05D006298 ORTHO05D008167 1.5e-75 287.0 277 61.0
Atru.BG.206.p Acer truncatum HOM05D006298 ORTHO05D008167 1.9e-75 286.6 180 77.8
BolC4t28046H Brassica oleracea HOM05D006298 ORTHO05D008167 3.3e-75 285.8 260 61.5
CDE03G0133 Ceratophyllum demersum HOM05D006298 ORTHO05D008167 4.3e-75 285.4 266 58.3
AT2G36895 Arabidopsis thaliana HOM05D006298 ORTHO05D008167 5.7e-75 285.0 287 55.4
A04p28210 Brassica napus HOM05D006298 ORTHO05D008167 5.7e-75 285.0 260 61.9
C04p65570 Brassica napus HOM05D006298 ORTHO05D008167 5.7e-75 285.0 260 61.9
HanXRQChr11g0350481 Helianthus annuus HOM05D006298 ORTHO05D008167 7.4e-75 284.6 267 59.6
Sc20g0005540 Simmondsia chinensis HOM05D006298 ORTHO05D008167 9.7e-75 284.3 269 58.0
BcaC02g07571 Brassica carinata HOM05D006298 ORTHO05D008167 2.1e-74 283.1 260 61.2
PGSC0003DMG400028288 Solanum tuberosum HOM05D006298 ORTHO05D008167 2.8e-74 282.7 250 58.4
BraA04t18305Z Brassica rapa HOM05D006298 ORTHO05D008167 4.8e-74 282.0 260 60.0
MBI18_g02636_MAGBIO Magnolia biondii HOM05D006298 ORTHO05D008167 4.8e-74 282.0 312 54.2
vmacro07297 Vaccinium macrocarpon HOM05D006298 ORTHO05D008167 1.4e-73 280.4 183 76.5
Lsat_1_v5_gn_1_51681 Lactuca sativa HOM05D006298 ORTHO05D008167 2.4e-73 279.6 263 58.9
Peaxi162Scf00311g01110 Petunia axillaris HOM05D006298 ORTHO05D008167 2.4e-73 279.6 246 59.8
ATR0219G012 Amborella trichopoda HOM05D006298 ORTHO05D008167 5.3e-73 278.5 271 57.6
Sopen10g033440 Solanum pennellii HOM05D006298 ORTHO05D008167 9.0e-73 277.7 251 57.8
Solyc10g083990.2 Solanum lycopersicum HOM05D006298 ORTHO05D008167 1.5e-72 276.9 251 57.8
Os03g0152600 Oryza sativa ssp. japonica HOM05D006298 ORTHO05D008167 2.0e-72 276.6 252 59.5
EL10Ac7g16640 Beta vulgaris HOM05D006298 ORTHO05D008167 3.4e-72 275.8 277 56.7
AUR62040336 Chenopodium quinoa HOM05D006298 ORTHO05D008167 7.2e-70 268.1 267 59.2
Ah.08g211590 Amaranthus hybridus HOM05D006298 ORTHO05D008167 7.9e-69 264.6 277 54.9
AUR62042070 Chenopodium quinoa HOM05D006298 ORTHO05D008167 5.7e-67 258.5 267 56.2
AUR62044331 Chenopodium quinoa HOM05D006298 ORTHO05D008167 5.7e-67 258.5 267 56.2
Duzib093G1320 Durio zibethinus HOM05D006298 ORTHO05D008167 5.7e-67 258.5 260 55.8
Nn6g35281 Nelumbo nucifera HOM05D006298 ORTHO05D008167 7.7e-64 248.1 183 71.6
AL4G33120 Arabidopsis lyrata HOM05D006298 ORTHO05D008167 7.2e-62 241.5 260 55.0
Dinv35789 Davidia involucrata HOM05D006298 ORTHO05D008167 1.0e-60 237.7 190 70.5
ECA248G3050 Erigeron canadensis HOM05D006298 ORTHO05D008167 8.8e-60 234.6 189 63.0
SMO119G0246 Selaginella moellendorffii HOM05D006298 ORTHO05D008167 4.2e-54 215.7 210 52.9
Medtr1g063100 Medicago truncatula HOM05D006298 ORTHO05D008167 2.7e-53 213.0 190 64.7
Mapoly0063s0087 Marchantia polymorpha HOM05D006298 ORTHO05D008167 7.9e-53 211.5 200 54.5
Atru.chr8.1795 Acer truncatum HOM05D006298 ORTHO05D008167 1.0e-52 211.1 130 80.8
unitig_26.g9235 Utricularia gibba HOM05D006298 ORTHO05D008167 1.1e-51 207.6 150 69.3
Pp3c6_17550 Physcomitrium patens HOM05D006298 ORTHO05D008167 2.6e-51 206.5 242 49.6
AUR62042510 Chenopodium quinoa HOM05D006298 ORTHO05D008167 2.2e-50 203.4 263 50.2
SEGI_37587 Sequoiadendron giganteum HOM05D006298 ORTHO05D008167 1.2e-48 197.6 151 64.9
Zm00001eb403160 Zea mays HOM05D006298 ORTHO05D008167 4.5e-48 195.7 194 57.2
BcaC02g07569 Brassica carinata HOM05D006298 ORTHO05D008167 1.4e-44 184.1 213 54.0
Hma1.2p1_0205F.1_g086930 Hydrangea macrophylla HOM05D006298 ORTHO05D008167 9.7e-43 177.9 154 64.9
CARHR131360 Cardamine hirsuta HOM05D006298 ORTHO05D008167 7.5e-35 151.8 110 68.2
AagrBONN_evm.TU.Sc2ySwM_228.4347 Anthoceros agrestis HOM05D006298 ORTHO05D008167 1.6e-32 144.1 106 66.0
CBR_g45378 Chara braunii HOM05D006298 ORTHO05D008167 1.2e-27 127.9 105 61.9
Thhalv10000465m.g Eutrema salsugineum HOM05D006298 ORTHO05D008167 3.5e-24 116.3 112 57.1
BcaB01g03809 Brassica carinata HOM05D006298 ORTHO05D008167 2.9e-23 113.2 96 54.2
Cre11.g469100 Chlamydomonas reinhardtii HOM05D006298 ORTHO05D008167 6.6e-23 112.1 174 38.5
Medtr6g035275 Medicago truncatula HOM05D006298 ORTHO05D008167 8.6e-23 111.7 54 96.3
MD12G1110600 Malus domestica HOM05D006298 ORTHO05D008167 1.7e-18 97.4 49 87.8
Ca_27221_v3 Cicer arietinum L. HOM05D006298 ORTHO05D008167 2.9e-18 96.7 65 69.2
BcaC04g19302 Brassica carinata HOM05D006298 ORTHO05D008167 7.0e-17 92.0 56 78.6
BcaC02g07570 Brassica carinata HOM05D006298 ORTHO05D008167 2.6e-11 73.6 38 78.9
Ca_27663_v3 Cicer arietinum L. HOM05D002033 ORTHO05D002181 2.7e-08 63.5 38 78.9
Prupe.4G234300 Prunus persica HOM05D006298 ORTHO05D007008 7.8e-08 62.0 31 87.1
arahy.Tifrunner.gnm1.ann1.31G0Q2 Arachis hypogaea HOM05D006298 ORTHO05D082484 3.9e-07 59.7 34 76.5


User provided reference genes

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