Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_20469 Corylus avellana HOM05D000881 ORTHO05D000666 4.4e-89 331.3 167 100.0
Cfa017677 Carpinus fangiana HOM05D000881 ORTHO05D000666 1.6e-62 243.0 182 75.3
Haze_03451 Corylus avellana HOM05D000881 ORTHO05D000666 1.7e-19 100.1 164 40.9
Haze_03455 Corylus avellana HOM05D000881 ORTHO05D000666 1.7e-19 100.1 164 40.9
Haze_03567 Corylus avellana HOM05D021788 ORTHO05D000666 1.0e-13 80.9 85 50.6
Potri.013G054900 Populus trichocarpa HOM05D000881 ORTHO05D000666 1.4e-13 80.5 195 30.3
Sabra13G0049400 Salix brachista HOM05D000881 ORTHO05D000666 4.0e-13 79.0 197 32.5
Haze_03560 Corylus avellana HOM05D021788 ORTHO05D000666 2.0e-12 76.6 85 48.2
Dinv25100 Davidia involucrata HOM05D000881 ORTHO05D000666 2.0e-12 76.6 195 33.3
Sabra19G0049000 Salix brachista HOM05D000881 ORTHO05D000666 2.6e-12 76.3 184 32.6
Cfa010622 Carpinus fangiana HOM05D021788 ORTHO05D000666 1.7e-11 73.6 85 45.9
Atru.chr2.1411 Acer truncatum HOM05D000881 ORTHO05D000666 2.8e-11 72.8 199 31.2
ClCG04G012640 Citrullus lanatus HOM05D000881 ORTHO05D000666 3.7e-11 72.4 159 33.3
Potri.013G054800 Populus trichocarpa HOM05D000881 ORTHO05D000666 3.7e-11 72.4 167 32.9
DCAR_009080 Daucus carota HOM05D000881 ORTHO05D000666 4.8e-11 72.0 160 31.2
Sed0019450 Sechium edule HOM05D000881 ORTHO05D000666 4.8e-11 72.0 173 32.4
TWI34G1202 Tripterygium wilfordii HOM05D000881 ORTHO05D000666 6.3e-11 71.6 161 32.9
MD14G1004900 Malus domestica HOM05D000881 ORTHO05D000666 8.2e-11 71.2 170 34.7
MELO3C001943.2 Cucumis melo HOM05D000881 ORTHO05D000666 1.4e-10 70.5 147 35.4
Actinidia37795 Actinidia chinensis HOM05D000881 ORTHO05D000666 4.1e-10 68.9 154 35.1
Cpa.g.sc161.5 Carica papaya HOM05D000881 ORTHO05D000666 7.0e-10 68.2 183 31.7
Haze_03563 Corylus avellana HOM05D021788 ORTHO05D000666 9.1e-10 67.8 142 35.2
Thecc.05G246400 Theobroma cacao HOM05D000881 ORTHO05D000666 9.1e-10 67.8 186 30.6
CANSAT78G1545 Cannabis sativa HOM05D000881 ORTHO05D000666 1.2e-09 67.4 174 31.6
AUR62039721 Chenopodium quinoa HOM05D000881 ORTHO05D000666 1.6e-09 67.0 197 27.9
Ciclev10022272m.g Citrus clementina HOM05D000881 ORTHO05D000666 2.0e-09 66.6 121 37.2
Ciclev10022629m.g Citrus clementina HOM05D000881 ORTHO05D000666 2.0e-09 66.6 98 37.8
RcHm_v2.0_Chr3g0496561 Rosa chinensis HOM05D000881 ORTHO05D000666 2.0e-09 66.6 174 31.0
Prupe.7G008300 Prunus persica HOM05D000881 ORTHO05D000666 2.7e-09 66.2 169 32.0
QL10p034472 Quercus lobata HOM05D000881 ORTHO05D000666 2.7e-09 66.2 199 29.1
AUR62036271 Chenopodium quinoa HOM05D000881 ORTHO05D000666 3.5e-09 65.9 193 28.5
MD12G1007600 Malus domestica HOM05D000881 ORTHO05D000666 3.5e-09 65.9 170 32.4
Manes.09G138700 Manihot esculenta HOM05D000881 ORTHO05D000666 4.5e-09 65.5 133 37.6
Actinidia03943 Actinidia chinensis HOM05D000881 ORTHO05D000666 7.7e-09 64.7 106 37.7
Potri.013G054700 Populus trichocarpa HOM05D000881 ORTHO05D000666 1.3e-08 63.9 157 31.2
SpUn0001_0960 Schrenkiella parvula HOM05D000881 ORTHO05D000666 1.3e-08 63.9 165 30.9
BcaB01g04224 Brassica carinata HOM05D000881 ORTHO05D000666 2.9e-08 62.8 160 31.2
FAN03G2527 Fragaria x ananassa HOM05D000881 ORTHO05D000666 2.9e-08 62.8 177 28.8
CsaV3_1G005060 Cucumis sativus L. HOM05D000881 ORTHO05D000666 5.0e-08 62.0 148 32.4
Dinv03863 Davidia involucrata HOM05D000881 ORTHO05D000666 5.0e-08 62.0 175 30.9
FvH4_7g04830 Fragaria vesca HOM05D000881 ORTHO05D000666 5.0e-08 62.0 178 29.2
FAN06G1651 Fragaria x ananassa HOM05D000881 ORTHO05D000666 5.0e-08 62.0 178 29.2
FAN13G1177 Fragaria x ananassa HOM05D000881 ORTHO05D000666 5.0e-08 62.0 122 34.4
Potri.019G037700 Populus trichocarpa HOM05D000881 ORTHO05D000666 5.0e-08 62.0 169 31.4
Rhsim03G0053400 Rhododendron simsii HOM05D000881 ORTHO05D000666 5.0e-08 62.0 171 35.1
DCAR_009079 Daucus carota HOM05D000881 ORTHO05D000666 6.5e-08 61.6 183 27.3
Rhsim03G0053200 Rhododendron simsii HOM05D000881 ORTHO05D000666 6.5e-08 61.6 173 30.1
Rhsim03G0053300 Rhododendron simsii HOM05D000881 ORTHO05D000666 6.5e-08 61.6 170 32.9
TWI60G0863 Tripterygium wilfordii HOM05D000881 ORTHO05D000666 6.5e-08 61.6 193 30.1
CSS0033822 Camellia sinensis var. sinensis HOM05D000881 ORTHO05D000666 8.5e-08 61.2 165 34.5
Dinv11927 Davidia involucrata HOM05D000881 ORTHO05D000666 8.5e-08 61.2 190 31.1
AL1G64700 Arabidopsis lyrata HOM05D000881 ORTHO05D000666 1.1e-07 60.8 165 28.5
Duzib177G0536 Durio zibethinus HOM05D000881 ORTHO05D000666 1.1e-07 60.8 157 31.8
Lj2g0006631 Lotus japonicus HOM05D000881 ORTHO05D000666 1.5e-07 60.5 177 26.6
Medtr6g478190 Medicago truncatula HOM05D000881 ORTHO05D000666 1.5e-07 60.5 163 30.1
BcaC06g31769 Brassica carinata HOM05D000881 ORTHO05D000666 1.9e-07 60.1 169 30.8
Carub.0002s0956 Capsella rubella HOM05D000881 ORTHO05D000666 1.9e-07 60.1 157 30.6
Manes.09G138800 Manihot esculenta HOM05D000881 ORTHO05D000666 1.9e-07 60.1 172 29.1
Prupe.7G008400 Prunus persica HOM05D000881 ORTHO05D000666 1.9e-07 60.1 163 31.3
VMungo0331G1612 Vigna mungo HOM05D008573 ORTHO05D009911 1.9e-07 60.1 159 27.7
BcaC01g06208 Brassica carinata HOM05D000881 ORTHO05D000666 2.5e-07 59.7 160 32.5
A03p15510 Brassica napus HOM05D000881 ORTHO05D000666 2.5e-07 59.7 160 32.5
C03p18100 Brassica napus HOM05D000881 ORTHO05D000666 2.5e-07 59.7 160 32.5
BolC3t14213H Brassica oleracea HOM05D000881 ORTHO05D000666 2.5e-07 59.7 160 32.5
BraA03t10844Z Brassica rapa HOM05D000881 ORTHO05D000666 2.5e-07 59.7 160 32.5
Gohir.D08G236060 Gossypium hirsutum HOM05D000881 ORTHO05D000666 2.5e-07 59.7 159 30.2
Gorai.004G251100 Gossypium raimondii HOM05D000881 ORTHO05D000666 2.5e-07 59.7 159 30.2
EL10Ac5g11762 Beta vulgaris HOM05D000881 ORTHO05D000666 3.2e-07 59.3 187 27.3
Oeu044647.1 Olea europaea HOM05D000881 ORTHO05D000666 3.2e-07 59.3 116 31.0
AT1G54400 Arabidopsis thaliana HOM05D000881 ORTHO05D000666 4.2e-07 58.9 163 31.3
Duzib106G1189 Durio zibethinus HOM05D000881 ORTHO05D000666 4.2e-07 58.9 191 32.5
Psat1g121560 Pisum sativum HOM05D000881 ORTHO05D000666 4.2e-07 58.9 165 27.3
TPR.G19878 Trifolium pratense HOM05D000881 ORTHO05D000666 4.2e-07 58.9 165 27.3
AUR62014290 Chenopodium quinoa HOM05D000881 ORTHO05D000666 5.5e-07 58.5 85 41.2
AUR62034145 Chenopodium quinoa HOM05D000881 ORTHO05D000666 5.5e-07 58.5 85 41.2
Gohir.D11G244000 Gossypium hirsutum HOM05D000881 ORTHO05D000666 7.2e-07 58.2 186 28.0
Gorai.007G259500 Gossypium raimondii HOM05D000881 ORTHO05D000666 7.2e-07 58.2 186 28.0
Gorai.013G194400 Gossypium raimondii HOM05D000881 ORTHO05D000666 9.4e-07 57.8 158 30.4
Glyma.09G165300 Glycine max HOM05D000881 ORTHO05D000666 1.2e-06 57.4 149 28.9
Aa31LG2G1880 Aethionema arabicum HOM05D000881 ORTHO05D000666 1.6e-06 57.0 159 30.8
CARHR055530 Cardamine hirsuta HOM05D000881 ORTHO05D000666 2.1e-06 56.6 164 29.3
FAN04G1642 Fragaria x ananassa HOM05D000881 ORTHO05D000666 2.1e-06 56.6 132 32.6
Phvul.004G140900 Phaseolus vulgaris HOM05D000881 ORTHO05D000666 2.1e-06 56.6 149 26.8
RcHm_v2.0_Chr7g0177251 Rosa chinensis HOM05D000881 ORTHO05D000666 2.1e-06 56.6 117 32.5
Hund06059 Selenicereus undatus HOM05D000881 ORTHO05D000666 2.1e-06 56.6 98 33.7
Actinidia03944 Actinidia chinensis HOM05D000881 ORTHO05D000666 2.7e-06 56.2 163 27.0
Sc06g0002830 Simmondsia chinensis HOM05D000881 ORTHO05D000666 3.6e-06 55.8 85 36.5
CSS0013808 Camellia sinensis var. sinensis HOM05D000881 ORTHO05D000666 4.7e-06 55.5 198 27.3
CDE05G3520 Ceratophyllum demersum HOM05D000881 ORTHO05D000666 4.7e-06 55.5 106 33.0
COL.COLO4_32969 Corchorus olitorius HOM05D000881 ORTHO05D000666 4.7e-06 55.5 159 28.9
Lalb_Chr14g0370271 Lupinus albus HOM05D000881 ORTHO05D000666 4.7e-06 55.5 160 29.4
CSS0028596 Camellia sinensis var. sinensis HOM05D000881 ORTHO05D000666 6.1e-06 55.1 194 30.4
Thhalv10023940m.g Eutrema salsugineum HOM05D000881 ORTHO05D000666 6.1e-06 55.1 168 29.2
Gohir.A13G164900 Gossypium hirsutum HOM05D000881 ORTHO05D000666 8.0e-06 54.7 158 29.1
Sabra13G0049200 Salix brachista HOM05D000881 ORTHO05D000666 8.0e-06 54.7 154 26.0
Sabra13G0049300 Salix brachista HOM05D000881 ORTHO05D000666 8.0e-06 54.7 154 26.0


User provided reference genes

Program Settings