Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_20462 Corylus avellana HOM05D000881 ORTHO05D000666 1.1e-137 493.4 265 100.0
Cfa017687 Carpinus fangiana HOM05D000881 ORTHO05D000666 3.6e-45 186.0 132 75.8
CiPaw.16G038500 Carya illinoinensis HOM05D000881 ORTHO05D000666 5.9e-11 72.4 122 37.7
CiPaw.16G038300 Carya illinoinensis HOM05D000881 ORTHO05D000666 8.5e-10 68.6 121 39.7
Ciclev10022629m.g Citrus clementina HOM05D000881 ORTHO05D000666 9.4e-09 65.1 65 44.6
MD14G1005100 Malus domestica HOM05D000881 ORTHO05D000666 9.4e-09 65.1 127 31.5
Prupe.7G008300 Prunus persica HOM05D000881 ORTHO05D000666 9.4e-09 65.1 142 35.2
TWI34G1202 Tripterygium wilfordii HOM05D000881 ORTHO05D000666 2.1e-08 63.9 65 44.6
MBI11_g45239_MAGBIO Magnolia biondii HOM05D000881 ORTHO05D000666 2.7e-08 63.5 66 45.5
Peaxi162Scf00345g00410 Petunia axillaris HOM05D000881 ORTHO05D000666 3.6e-08 63.2 94 35.1
CSS0033822 Camellia sinensis var. sinensis HOM05D000881 ORTHO05D000666 6.1e-08 62.4 131 38.9
QL10p034472 Quercus lobata HOM05D000881 ORTHO05D000666 1.4e-07 61.2 74 37.8
Sabra04G0129800 Salix brachista HOM05D000881 ORTHO05D000666 2.3e-07 60.5 98 32.7
Sabra04G0129700 Salix brachista HOM05D000881 ORTHO05D000666 3.0e-07 60.1 74 39.2
arahy.Tifrunner.gnm1.ann1.J1HUHD Arachis hypogaea HOM05D000881 ORTHO05D000666 3.9e-07 59.7 68 45.6
arahy.Tifrunner.gnm1.ann1.Y8A2Y7 Arachis hypogaea HOM05D000881 ORTHO05D000666 3.9e-07 59.7 68 45.6
Cfa017677 Carpinus fangiana HOM05D000881 ORTHO05D000666 6.7e-07 58.9 130 31.5
Duzib128G0083 Durio zibethinus HOM05D000391 ORTHO05D010205 6.7e-07 58.9 65 46.2
MBI05_g04123_MAGBIO Magnolia biondii HOM05D000881 ORTHO05D000666 6.7e-07 58.9 65 38.5
Potri.004G191101 Populus trichocarpa HOM05D000881 ORTHO05D000666 6.7e-07 58.9 76 44.7
Potri.004G191200 Populus trichocarpa HOM05D000881 ORTHO05D000666 6.7e-07 58.9 76 44.7
CSS0021436 Camellia sinensis var. sinensis HOM05D000881 ORTHO05D000666 1.1e-06 58.2 75 45.3
Lj2g0006631 Lotus japonicus HOM05D000881 ORTHO05D000666 1.1e-06 58.2 120 31.7
PSO339G0007 Papaver somniferum HOM05D000881 ORTHO05D000666 1.1e-06 58.2 65 41.5
PSO384G0812 Papaver somniferum HOM05D000881 ORTHO05D000666 1.1e-06 58.2 65 41.5
Psat3g087960 Pisum sativum HOM05D000881 ORTHO05D000666 1.5e-06 57.8 69 43.5
RcHm_v2.0_Chr3g0496541 Rosa chinensis HOM05D000881 ORTHO05D000666 1.5e-06 57.8 68 42.6
COL.COLO4_32969 Corchorus olitorius HOM05D000881 ORTHO05D000666 2.0e-06 57.4 118 29.7
Manes.09G138700 Manihot esculenta HOM05D000881 ORTHO05D000666 2.6e-06 57.0 66 48.5
Ciclev10016041m.g Citrus clementina HOM05D000881 ORTHO05D000666 3.3e-06 56.6 64 40.6
Medtr7g086130 Medicago truncatula HOM05D000881 ORTHO05D000666 3.3e-06 56.6 74 39.2
TAR623G1394 Trochodendron aralioides HOM05D000881 ORTHO05D000666 4.4e-06 56.2 66 39.4
Gohir.A08G219200 Gossypium hirsutum HOM05D000881 ORTHO05D000666 5.7e-06 55.8 76 42.1
PSO017G5801 Papaver somniferum HOM05D000881 ORTHO05D000666 5.7e-06 55.8 65 38.5
Phvul.001G113500 Phaseolus vulgaris HOM05D000881 ORTHO05D000666 5.7e-06 55.8 75 40.0
TPR.G22510 Trifolium pratense HOM05D000881 ORTHO05D000666 5.7e-06 55.8 68 42.6
Cfa010462 Carpinus fangiana HOM05D045047 ORTHO05D000666 9.7e-06 55.1 66 36.4


User provided reference genes

Program Settings