Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_20440 Corylus avellana HOM05D003667 ORTHO05D004397 9.1e-57 223.4 117 100.0
Cfa017699 Carpinus fangiana HOM05D003667 ORTHO05D004397 3.0e-52 208.4 117 94.0
CiPaw.03G011100 Carya illinoinensis HOM05D003667 ORTHO05D004397 1.2e-48 196.4 115 87.8
CiPaw.04G007600 Carya illinoinensis HOM05D003667 ORTHO05D004397 2.9e-47 191.8 113 87.6
Haze_14026 Corylus avellana HOM05D003667 ORTHO05D004397 5.0e-47 191.0 114 86.8
CANSAT78G1932 Cannabis sativa HOM05D003667 ORTHO05D004397 2.7e-40 168.7 116 75.0
ClCG04G005470 Citrullus lanatus HOM05D003667 ORTHO05D004397 2.7e-40 168.7 115 74.8
RcHm_v2.0_Chr5g0045181 Rosa chinensis HOM05D003667 ORTHO05D004397 7.7e-40 167.2 116 72.4
CsaV3_4G012110 Cucumis sativus L. HOM05D003667 ORTHO05D004397 6.6e-39 164.1 115 73.0
Eucgr.K01520 Eucalyptus grandis HOM05D003667 ORTHO05D004397 1.1e-38 163.3 116 74.1
FvH4_3g25040 Fragaria vesca HOM05D003667 ORTHO05D004397 1.1e-38 163.3 116 69.8
FAN11G0144 Fragaria x ananassa HOM05D003667 ORTHO05D004397 1.1e-38 163.3 116 69.8
FAN25G1089 Fragaria x ananassa HOM05D003667 ORTHO05D004397 1.1e-38 163.3 116 69.8
FAN21G0540 Fragaria x ananassa HOM05D003667 ORTHO05D004397 1.9e-38 162.5 116 69.8
Lj2A112G40 Lonicera japonica HOM05D003667 ORTHO05D004397 1.9e-38 162.5 116 73.3
COL.COLO4_28620 Corchorus olitorius HOM05D003667 ORTHO05D004397 2.5e-38 162.2 116 73.3
MELO3C008823.2 Cucumis melo HOM05D003667 ORTHO05D004397 3.3e-38 161.8 115 72.2
Thecc.05G244000 Theobroma cacao HOM05D003667 ORTHO05D004397 3.3e-38 161.8 116 74.1
Sed0010728 Sechium edule HOM05D003667 ORTHO05D004397 5.5e-38 161.0 113 72.6
Duzib106G0749 Durio zibethinus HOM05D003667 ORTHO05D004397 7.2e-38 160.6 116 73.3
Gohir.D11G242600 Gossypium hirsutum HOM05D003667 ORTHO05D004397 1.6e-37 159.5 116 71.6
PGSC0003DMG400006127 Solanum tuberosum HOM05D003667 ORTHO05D004397 1.6e-37 159.5 116 69.8
Gohir.A11G231200 Gossypium hirsutum HOM05D003667 ORTHO05D004397 2.1e-37 159.1 116 71.6
Gorai.007G256800 Gossypium raimondii HOM05D003667 ORTHO05D004397 2.1e-37 159.1 116 71.6
Hma1.2p1_0106F.1_g051140 Hydrangea macrophylla HOM05D003667 ORTHO05D004397 2.1e-37 159.1 116 73.3
Sopen07g024170 Solanum pennellii HOM05D003667 ORTHO05D004397 3.6e-37 158.3 116 69.8
Solyc07g047720.3 Solanum lycopersicum HOM05D003667 ORTHO05D004397 6.1e-37 157.5 116 69.0
Actinidia06203 Actinidia chinensis HOM05D003667 ORTHO05D004397 8.0e-37 157.1 114 71.9
Lj2g0005685 Lotus japonicus HOM05D003667 ORTHO05D004397 1.4e-36 156.4 115 70.4
MD02G1195300 Malus domestica HOM05D003667 ORTHO05D004397 1.4e-36 156.4 114 70.2
Ciclev10022078m.g Citrus clementina HOM05D003667 ORTHO05D004397 1.8e-36 156.0 116 69.8
Rhsim02G0195900 Rhododendron simsii HOM05D003667 ORTHO05D004397 2.3e-36 155.6 113 70.8
GSVIVG01029952001 Vitis vinifera HOM05D003667 ORTHO05D004397 2.3e-36 155.6 115 70.4
Atru.chr2.1481 Acer truncatum HOM05D003667 ORTHO05D004397 3.0e-36 155.2 118 68.6
ClCG02G007830 Citrullus lanatus HOM05D003667 ORTHO05D004397 3.0e-36 155.2 113 70.8
DCAR_013483 Daucus carota HOM05D003667 ORTHO05D004397 3.0e-36 155.2 116 71.6
MSTRG.26557 Avicennia marina HOM05D003667 ORTHO05D004397 5.2e-36 154.5 115 67.8
Rhsim13G0206500 Rhododendron simsii HOM05D003667 ORTHO05D004397 5.2e-36 154.5 113 70.8
Actinidia07960 Actinidia chinensis HOM05D003667 ORTHO05D004397 8.9e-36 153.7 114 70.2
HanXRQChr07g0197181 Helianthus annuus HOM05D003667 ORTHO05D004397 1.2e-35 153.3 115 69.6
arahy.Tifrunner.gnm1.ann1.FV18MX Arachis hypogaea HOM05D003667 ORTHO05D004397 2.0e-35 152.5 116 71.6
CAN.G992.19 Capsicum annuum HOM05D003667 ORTHO05D004397 2.0e-35 152.5 116 68.1
Lalb_Chr10g0106501 Lupinus albus HOM05D003667 ORTHO05D004397 2.0e-35 152.5 116 72.4
Nitab4.5_0001774g0040 Nicotiana tabacum HOM05D003667 ORTHO05D004397 2.0e-35 152.5 116 67.2
MBI17_g12494_MAGBIO Magnolia biondii HOM05D003667 ORTHO05D004397 2.6e-35 152.1 116 67.2
PSO170G5262 Papaver somniferum HOM05D003667 ORTHO05D004397 4.4e-35 151.4 116 63.8
arahy.Tifrunner.gnm1.ann1.7QGR70 Arachis hypogaea HOM05D003667 ORTHO05D004397 5.7e-35 151.0 116 70.7
Nitab4.5_0001741g0020 Nicotiana tabacum HOM05D003667 ORTHO05D004397 5.7e-35 151.0 116 67.2
Os03g0655200 Oryza sativa ssp. japonica HOM05D003667 ORTHO05D004397 5.7e-35 151.0 114 67.5
CSS0013214 Camellia sinensis var. sinensis HOM05D003667 ORTHO05D004397 7.5e-35 150.6 113 70.8
Glyma.18G114700 Glycine max HOM05D003667 ORTHO05D004397 7.5e-35 150.6 116 69.8
Sed0016620 Sechium edule HOM05D003667 ORTHO05D004397 7.5e-35 150.6 113 69.9
THA.LOC104823778 Tarenaya hassleriana HOM05D003667 ORTHO05D004397 7.5e-35 150.6 116 69.8
Lj6g0022641 Lotus japonicus HOM05D003667 ORTHO05D004397 9.8e-35 150.2 108 71.3
PGSC0003DMG400018832 Solanum tuberosum HOM05D003667 ORTHO05D004397 1.3e-34 149.8 116 66.4
Nn7g37255 Nelumbo nucifera HOM05D003667 ORTHO05D004397 1.7e-34 149.4 115 67.8
Oeu035461.1 Olea europaea HOM05D003667 ORTHO05D004397 1.7e-34 149.4 116 66.4
MSTRG.10431 Avicennia marina HOM05D003667 ORTHO05D004397 2.2e-34 149.1 115 66.1
CSS0004374 Camellia sinensis var. sinensis HOM05D003667 ORTHO05D004397 2.8e-34 148.7 113 70.8
Hund10761 Selenicereus undatus HOM05D003667 ORTHO05D004397 2.8e-34 148.7 113 69.9
SGA_v2.0_scaffold392G50657 Striga asiatica HOM05D003667 ORTHO05D004397 2.8e-34 148.7 115 65.2
SGA_v2.0_scaffold41G15803 Striga asiatica HOM05D003667 ORTHO05D004397 2.8e-34 148.7 113 65.5
TWI38G1994 Tripterygium wilfordii HOM05D003667 ORTHO05D004397 2.8e-34 148.7 114 69.3
Migut.L01870 Erythranthe guttata HOM05D003667 ORTHO05D004397 3.7e-34 148.3 113 63.7
Phvul.006G027100 Phaseolus vulgaris HOM05D003667 ORTHO05D004397 3.7e-34 148.3 116 69.0
TPR.G8769 Trifolium pratense HOM05D003667 ORTHO05D004397 3.7e-34 148.3 116 69.0
Manes.09G137700 Manihot esculenta HOM05D003667 ORTHO05D004397 4.9e-34 147.9 115 70.4
HPP92_027259 Vanilla planifolia HOM05D003667 ORTHO05D004397 4.9e-34 147.9 114 65.8
arahy.Tifrunner.gnm1.ann1.VNW58P Arachis hypogaea HOM05D003667 ORTHO05D004397 6.3e-34 147.5 116 69.8
PSO357G0141 Papaver somniferum HOM05D003667 ORTHO05D004397 6.3e-34 147.5 114 64.9
Glyma.08G304700 Glycine max HOM05D003667 ORTHO05D004397 8.3e-34 147.1 116 67.2
Lalb_Chr17g0348151 Lupinus albus HOM05D003667 ORTHO05D004397 8.3e-34 147.1 116 70.7
AT2G36900 Arabidopsis thaliana HOM05D003667 ORTHO05D004397 1.1e-33 146.7 116 67.2
Ca_06238_v3 Cicer arietinum L. HOM05D003667 ORTHO05D004397 1.1e-33 146.7 116 69.0
Nn6g34578 Nelumbo nucifera HOM05D003667 ORTHO05D004397 1.4e-33 146.4 116 64.7
TWI38G1198 Tripterygium wilfordii HOM05D003667 ORTHO05D004397 1.4e-33 146.4 114 69.3
PSO675G2224 Papaver somniferum HOM05D003667 ORTHO05D004397 1.8e-33 146.0 115 63.5
TAR623G0153 Trochodendron aralioides HOM05D003667 ORTHO05D004397 1.8e-33 146.0 114 67.5
AL4G33130 Arabidopsis lyrata HOM05D003667 ORTHO05D004397 2.4e-33 145.6 116 66.4
Cc03_g11050 Coffea canephora HOM05D003667 ORTHO05D004397 3.1e-33 145.2 116 64.7
Prupe.2G153200 Prunus persica HOM05D003667 ORTHO05D004397 3.1e-33 145.2 114 67.5
Cpa.g.sc28.13 Carica papaya HOM05D003667 ORTHO05D004397 4.1e-33 144.8 118 67.8
Psat2g018160 Pisum sativum HOM05D003667 ORTHO05D004397 4.1e-33 144.8 116 65.5
CDE10G1021 Ceratophyllum demersum HOM05D003667 ORTHO05D004397 7.0e-33 144.1 118 64.4
CARHR257860 Cardamine hirsuta HOM05D003667 ORTHO05D004397 1.2e-32 143.3 116 64.7
Thhalv10017208m.g Eutrema salsugineum HOM05D003667 ORTHO05D004397 1.2e-32 143.3 116 64.7
Sabra13G0056100 Salix brachista HOM05D003667 ORTHO05D004397 1.2e-32 143.3 118 66.1
VMungo0540G2144 Vigna mungo HOM05D003667 ORTHO05D004397 1.2e-32 143.3 116 68.1
AL8G24670 Arabidopsis lyrata HOM05D003667 ORTHO05D004397 1.6e-32 142.9 116 64.7
Medtr5g090520 Medicago truncatula HOM05D003667 ORTHO05D004397 1.6e-32 142.9 116 66.4
Potri.013G062900 Populus trichocarpa HOM05D003667 ORTHO05D004397 1.6e-32 142.9 118 66.9
Zm00001eb052810 Zea mays HOM05D003667 ORTHO05D004397 1.6e-32 142.9 114 67.5
CARHR131380 Cardamine hirsuta HOM05D003667 ORTHO05D004397 2.0e-32 142.5 116 63.8
Psat5g209680 Pisum sativum HOM05D003667 ORTHO05D004397 2.0e-32 142.5 114 66.7
AT5G50440 Arabidopsis thaliana HOM05D003667 ORTHO05D004397 2.7e-32 142.1 116 64.7
A05p08960 Brassica napus HOM05D003667 ORTHO05D004397 2.7e-32 142.1 116 62.9
C04p11070 Brassica napus HOM05D003667 ORTHO05D004397 2.7e-32 142.1 116 62.9
BolC4t22755H Brassica oleracea HOM05D003667 ORTHO05D004397 2.7e-32 142.1 116 62.9
Carub.0004s1876 Capsella rubella HOM05D003667 ORTHO05D004397 2.7e-32 142.1 116 64.7
Carub.0008s1055 Capsella rubella HOM05D003667 ORTHO05D004397 2.7e-32 142.1 116 64.7
Thhalv10014611m.g Eutrema salsugineum HOM05D003667 ORTHO05D004397 2.7e-32 142.1 116 64.7
Medtr3g450200 Medicago truncatula HOM05D003667 ORTHO05D004397 2.7e-32 142.1 114 67.5
SEGI_40073 Sequoiadendron giganteum HOM05D003667 ORTHO05D004397 3.5e-32 141.7 114 64.9
Aa31LG6G14320 Aethionema arabicum HOM05D003667 ORTHO05D004397 4.5e-32 141.4 116 62.9
BcaB02g09321 Brassica carinata HOM05D003667 ORTHO05D004397 4.5e-32 141.4 116 62.9
BcaC02g11814 Brassica carinata HOM05D003667 ORTHO05D004397 4.5e-32 141.4 116 62.9
Prupe.7G022400 Prunus persica HOM05D003667 ORTHO05D004397 4.5e-32 141.4 114 65.8
BraA05t19858Z Brassica rapa HOM05D003667 ORTHO05D004397 1.0e-31 140.2 116 62.1
PSO541G6155 Papaver somniferum HOM05D003667 ORTHO05D004397 2.3e-31 139.0 115 61.7
Peaxi162Scf00776g00027 Petunia axillaris HOM05D003667 ORTHO05D004397 2.3e-31 139.0 106 69.8
Aqoxy1G00535 Aquilegia oxysepala HOM05D003667 ORTHO05D004397 2.9e-31 138.7 116 63.8
unitig_578.g16057 Utricularia gibba HOM05D003667 ORTHO05D004397 6.6e-31 137.5 110 62.7
Sp4g19200 Schrenkiella parvula HOM05D003667 ORTHO05D004397 8.6e-31 137.1 116 61.2
unitig_8.g4943 Utricularia gibba HOM05D003667 ORTHO05D004397 1.5e-30 136.3 102 68.6
Ca_13917_v3 Cicer arietinum L. HOM05D003667 ORTHO05D004397 1.9e-30 136.0 114 63.2
MBI05_g12099_MAGBIO Magnolia biondii HOM05D003667 ORTHO05D004397 1.9e-30 136.0 102 71.6
Nitab4.5_0001701g0060 Nicotiana tabacum HOM05D003667 ORTHO05D004397 1.2e-29 133.3 103 66.0
TPR.G14738 Trifolium pratense HOM05D003667 ORTHO05D004397 1.6e-29 132.9 113 64.6
arahy.Tifrunner.gnm1.ann1.B982CP Arachis hypogaea HOM05D003667 ORTHO05D004397 3.6e-29 131.7 114 63.2
Mapoly0001s0234 Marchantia polymorpha HOM05D003667 ORTHO05D004397 4.7e-29 131.3 113 59.3
SMO358G0442 Selaginella moellendorffii HOM05D003667 ORTHO05D004397 3.4e-27 125.2 113 54.9
Pp3c11_11980 Physcomitrium patens HOM05D003667 ORTHO05D004397 8.3e-26 120.6 113 53.1
HanXRQChr14g0453611 Helianthus annuus HOM05D003667 ORTHO05D004397 1.2e-24 116.7 115 59.1
Pp3c7_13000 Physcomitrium patens HOM05D003667 ORTHO05D004397 2.3e-23 112.5 113 46.9
Solyc05g040100.4 Solanum lycopersicum HOM05D003667 ORTHO05D004397 3.0e-23 112.1 170 42.9
EL10Ac7g17477 Beta vulgaris HOM05D003667 ORTHO05D004397 1.2e-21 106.7 115 53.0
Lsat_1_v5_gn_6_31701 Lactuca sativa HOM05D003667 ORTHO05D004397 1.8e-20 102.8 114 52.6
Glyma.02G282800 Glycine max HOM05D003667 ORTHO05D004397 2.3e-20 102.4 115 53.9
Lsat_1_v5_gn_2_103600 Lactuca sativa HOM05D003667 ORTHO05D004397 6.8e-20 100.9 109 55.0
Cre12.g554200 Chlamydomonas reinhardtii HOM05D003667 ORTHO05D004397 1.2e-19 100.1 111 50.5
CSS0044789 Camellia sinensis var. sinensis HOM05D003667 ORTHO05D004397 2.0e-19 99.4 113 53.1
AUR62008662 Chenopodium quinoa HOM05D003667 ORTHO05D004397 2.0e-19 99.4 115 49.6
BcaC02g10601 Brassica carinata HOM05D003667 ORTHO05D004397 7.5e-19 97.4 119 47.9
QL07p048797 Quercus lobata HOM05D000002 ORTHO05D000001 1.9e-17 92.8 61 80.3
CBR_g20321 Chara braunii HOM05D003667 ORTHO05D004397 1.6e-16 89.7 92 51.1
arahy.Tifrunner.gnm1.ann1.X6I371 Arachis hypogaea HOM05D003667 ORTHO05D004397 2.1e-16 89.4 87 57.5
Actinidia03933 Actinidia chinensis HOM05D003667 ORTHO05D004397 3.5e-16 88.6 102 54.9
AUR62033107 Chenopodium quinoa HOM05D003667 ORTHO05D004397 3.5e-16 88.6 77 59.7
FAN16G1288 Fragaria x ananassa HOM05D003667 ORTHO05D004397 7.8e-16 87.4 53 73.6
BcaB06g28959 Brassica carinata HOM05D003667 ORTHO05D004397 1.7e-15 86.3 57 70.2
PRCOL_00002098 Prasinoderma coloniale HOM05D003667 ORTHO05D004397 5.1e-15 84.7 115 42.6
Oeu063104.1 Olea europaea HOM05D003667 ORTHO05D004397 6.6e-15 84.3 54 72.2
MCO05G601 Micromonas commoda HOM05D003667 ORTHO05D004397 7.3e-14 80.9 117 35.9
Sc01g0006150 Simmondsia chinensis HOM05D003667 ORTHO05D004397 9.5e-14 80.5 62 72.6
BolC4t28047H Brassica oleracea HOM05D003667 ORTHO05D004397 8.1e-13 77.4 51 70.6
A04p28220 Brassica napus HOM05D003667 ORTHO05D004397 1.1e-12 77.0 51 70.6
C04p65580 Brassica napus HOM05D003667 ORTHO05D004397 1.1e-12 77.0 51 70.6
Dinv05568 Davidia involucrata HOM05D003667 ORTHO05D004397 1.4e-12 76.6 62 67.7
Ah.08g213160 Amaranthus hybridus HOM05D003667 ORTHO05D004397 1.8e-12 76.3 70 62.9
Oeu003870.1 Olea europaea HOM05D003667 ORTHO05D004397 2.3e-12 75.9 62 69.4
ECA238G3478 Erigeron canadensis HOM05D003667 ORTHO05D004397 3.1e-12 75.5 116 42.2
BraA04t18306Z Brassica rapa HOM05D003667 ORTHO05D004397 4.0e-12 75.1 50 70.0
Ah.02g128310 Amaranthus hybridus HOM05D003667 ORTHO05D004397 6.8e-12 74.3 62 67.7
AUR62033108 Chenopodium quinoa HOM05D003667 ORTHO05D004397 2.0e-11 72.8 64 64.1
CDE10G1036 Ceratophyllum demersum HOM05D003667 ORTHO05D004397 3.4e-11 72.0 50 64.0
TPR.G36075 Trifolium pratense HOM05D003667 ORTHO05D004397 5.8e-11 71.2 50 70.0
AagrBONN_evm.TU.Sc2ySwM_117.3822 Anthoceros agrestis HOM05D003667 ORTHO05D004397 2.7e-08 62.4 74 45.9
AagrBONN_evm.TU.Sc2ySwM_362.869 Anthoceros agrestis HOM05D003667 ORTHO05D004397 2.7e-08 62.4 74 45.9
COL.COLO4_28622 Corchorus olitorius HOM05D003667 ORTHO05D004397 2.3e-07 59.3 78 47.4
Actinidia37807 Actinidia chinensis HOM05D003667 ORTHO05D004397 3.3e-06 55.5 62 53.2
BNapus_Darmor_BZH_scaffold_271p00010 Brassica napus HOM05D003667 ORTHO05D004397 3.3e-06 55.5 97 41.2
C04p25660 Brassica napus HOM05D003667 ORTHO05D004397 3.3e-06 55.5 97 41.2
C05p50890 Brassica napus HOM05D003667 ORTHO05D004397 3.3e-06 55.5 97 41.2


User provided reference genes

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