Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_20425 Corylus avellana HOM05D003079 ORTHO05D003461 1.6e-47 192.6 106 100.0
Haze_07774 Corylus avellana HOM05D003079 ORTHO05D003461 5.9e-31 137.5 89 85.4
Haze_09917 Corylus avellana HOM05D003079 ORTHO05D003461 5.2e-27 124.4 105 72.4
Haze_23128 Corylus avellana HOM05D003079 ORTHO05D003461 1.6e-20 102.8 86 73.3
Thecc.07G001500 Theobroma cacao HOM05D003079 ORTHO05D003461 8.1e-20 100.5 72 76.4
TWI39G1230 Tripterygium wilfordii HOM05D003079 ORTHO05D003461 4.0e-19 98.2 102 57.8
TWI14G0136 Tripterygium wilfordii HOM05D003079 ORTHO05D003461 8.9e-19 97.1 96 59.4
COL.COLO4_07791 Corchorus olitorius HOM05D003079 ORTHO05D003461 1.5e-18 96.3 101 58.4
QL08p000493 Quercus lobata HOM05D003079 ORTHO05D003461 7.5e-18 94.0 103 59.2
TWI38G1795 Tripterygium wilfordii HOM05D003079 ORTHO05D003461 1.3e-17 93.2 99 56.6
CSS0022300 Camellia sinensis var. sinensis HOM05D003079 ORTHO05D003461 3.7e-17 91.7 96 61.5
CSS0035812 Camellia sinensis var. sinensis HOM05D003079 ORTHO05D003461 3.7e-17 91.7 96 61.5
MELO3C014061.2 Cucumis melo HOM05D003079 ORTHO05D003461 6.4e-17 90.9 69 73.9
CsaV3_3G003800 Cucumis sativus L. HOM05D003079 ORTHO05D003461 6.4e-17 90.9 69 73.9
Cpa.g.sc12.64 Carica papaya HOM05D003079 ORTHO05D003461 8.3e-17 90.5 94 59.6
Duzib213G0264 Durio zibethinus HOM05D003079 ORTHO05D003461 1.4e-16 89.7 68 72.1
ClCG00G001200 Citrullus lanatus HOM05D003079 ORTHO05D003461 2.4e-16 89.0 69 72.5
ClCG10G003820 Citrullus lanatus HOM05D003079 ORTHO05D003461 2.4e-16 89.0 69 72.5
ClCG10G003930 Citrullus lanatus HOM05D003079 ORTHO05D003461 2.4e-16 89.0 69 72.5
Sed0005838 Sechium edule HOM05D003079 ORTHO05D003461 2.4e-16 89.0 75 68.0
SalBow8G1693 Salvia bowleyana HOM05D003079 ORTHO05D003461 4.1e-16 88.2 73 67.1
Dinv19642 Davidia involucrata HOM05D003079 ORTHO05D003461 9.2e-16 87.0 103 56.3
Ciclev10007777m.g Citrus clementina HOM05D003079 ORTHO05D003461 1.6e-15 86.3 93 59.1
Potri.001G472000 Populus trichocarpa HOM05D003079 ORTHO05D003461 2.1e-15 85.9 103 54.4
CiPaw.12G142800 Carya illinoinensis HOM05D003079 ORTHO05D003461 2.7e-15 85.5 95 62.1
Manes.05G204700 Manihot esculenta HOM05D003079 ORTHO05D003461 2.7e-15 85.5 103 49.5
Sopen07g034350 Solanum pennellii HOM05D003079 ORTHO05D003461 2.7e-15 85.5 99 57.6
Hma1.2p1_0193F.1_g084340 Hydrangea macrophylla HOM05D003079 ORTHO05D003461 3.5e-15 85.1 105 53.3
Lj1A901G36 Lonicera japonica HOM05D003079 ORTHO05D003461 7.8e-15 84.0 94 60.6
Potri.011G169000 Populus trichocarpa HOM05D003079 ORTHO05D003461 7.8e-15 84.0 104 54.8
CiPaw.12G142700 Carya illinoinensis HOM05D003079 ORTHO05D003461 1.0e-14 83.6 95 61.1
Duzib268G0697 Durio zibethinus HOM05D003079 ORTHO05D003461 1.0e-14 83.6 101 55.4
Nitab4.5_0009408g0020 Nicotiana tabacum HOM05D003079 ORTHO05D003461 1.7e-14 82.8 95 51.6
Eucgr.F03644 Eucalyptus grandis HOM05D003079 ORTHO05D003461 3.0e-14 82.0 69 69.6
TAR611G0001 Trochodendron aralioides HOM05D003079 ORTHO05D003461 3.0e-14 82.0 96 55.2
RcHm_v2.0_Chr5g0074601 Rosa chinensis HOM05D003079 ORTHO05D003461 3.9e-14 81.6 98 56.1
PGSC0003DMG400022146 Solanum tuberosum HOM05D003079 ORTHO05D003461 3.9e-14 81.6 99 56.6
CAN.G623.75 Capsicum annuum HOM05D003079 ORTHO05D003461 6.6e-14 80.9 89 57.3
PGR083G0768 Punica granatum HOM05D003079 ORTHO05D003461 6.6e-14 80.9 70 67.1
Sed0022199 Sechium edule HOM05D003079 ORTHO05D003461 1.1e-13 80.1 117 48.7
Nitab4.5_0000152g0030 Nicotiana tabacum HOM05D003079 ORTHO05D003461 1.5e-13 79.7 96 53.1
Prupe.6G035500 Prunus persica HOM05D003079 ORTHO05D003461 1.5e-13 79.7 105 47.6
Gohir.A13G128400 Gossypium hirsutum HOM05D003079 ORTHO05D003461 1.9e-13 79.3 99 50.5
Nn1g07629 Nelumbo nucifera HOM05D003079 ORTHO05D003461 2.5e-13 79.0 67 65.7
Gohir.D13G131800 Gossypium hirsutum HOM05D003079 ORTHO05D003461 4.3e-13 78.2 99 49.5
Cc05_g15720 Coffea canephora HOM05D003079 ORTHO05D003461 7.3e-13 77.4 94 56.4
Gorai.013G147800 Gossypium raimondii HOM05D003079 ORTHO05D003461 7.3e-13 77.4 99 49.5
MD03G1043100 Malus domestica HOM05D003079 ORTHO05D003461 7.3e-13 77.4 93 51.6
Actinidia30350 Actinidia chinensis HOM05D003079 ORTHO05D003461 1.2e-12 76.6 105 47.6
FAN21G1152 Fragaria x ananassa HOM05D003079 ORTHO05D003461 1.6e-12 76.3 102 51.0
vmacro11641 Vaccinium macrocarpon HOM05D003079 ORTHO05D003461 2.1e-12 75.9 100 50.0
Atru.chr2.3897 Acer truncatum HOM05D003079 ORTHO05D003461 2.8e-12 75.5 64 68.8
MSTRG.13045 Avicennia marina HOM05D003079 ORTHO05D003461 2.8e-12 75.5 73 60.3
Gohir.A11G276200 Gossypium hirsutum HOM05D003079 ORTHO05D003461 2.8e-12 75.5 101 50.5
Peaxi162Scf00232g00614 Petunia axillaris HOM05D003079 ORTHO05D003461 2.8e-12 75.5 91 57.1
Sabra11G0137800 Salix brachista HOM05D003079 ORTHO05D003461 4.7e-12 74.7 103 51.5
GSVIVG01014846001 Vitis vinifera HOM05D003079 ORTHO05D003461 4.7e-12 74.7 46 89.1
Gohir.D11G286600 Gossypium hirsutum HOM05D003079 ORTHO05D003461 6.2e-12 74.3 101 49.5
Gorai.007G310000 Gossypium raimondii HOM05D003079 ORTHO05D003461 6.2e-12 74.3 101 49.5
MD11G1046100 Malus domestica HOM05D003079 ORTHO05D003461 6.2e-12 74.3 93 51.6
FvH4_3g41590 Fragaria vesca HOM05D003079 ORTHO05D003461 1.4e-11 73.2 103 52.4
FAN11G0995 Fragaria x ananassa HOM05D003079 ORTHO05D003461 1.4e-11 73.2 103 52.4
TAR627G0159 Trochodendron aralioides HOM05D003079 ORTHO05D003461 1.4e-11 73.2 94 48.9
Oeu005543.1 Olea europaea HOM05D003079 ORTHO05D003461 1.8e-11 72.8 70 62.9
Nitab4.5_0003570g0050 Nicotiana tabacum HOM05D003079 ORTHO05D003461 4.0e-11 71.6 104 46.2
Oeu062673.1 Olea europaea HOM05D003079 ORTHO05D003461 4.0e-11 71.6 70 58.6
FAN16G0740 Fragaria x ananassa HOM05D003079 ORTHO05D003461 5.2e-11 71.2 96 51.0
Rhsim04G0008000 Rhododendron simsii HOM05D003079 ORTHO05D003461 5.2e-11 71.2 65 64.6
Duzib170G0955 Durio zibethinus HOM05D003079 ORTHO05D003461 6.8e-11 70.9 99 49.5
TAR626G0479 Trochodendron aralioides HOM05D003079 ORTHO05D003461 1.2e-10 70.1 99 49.5
Lj8C183T12 Lonicera japonica HOM05D003079 ORTHO05D003461 1.5e-10 69.7 62 67.7
Actinidia31529 Actinidia chinensis HOM05D003079 ORTHO05D003461 2.6e-10 68.9 105 44.8
CSS0018146 Camellia sinensis var. sinensis HOM05D003079 ORTHO05D003461 2.6e-10 68.9 89 51.7
Migut.M01581 Erythranthe guttata HOM05D003079 ORTHO05D003461 2.6e-10 68.9 87 55.2
Nitab4.5_0002216g0030 Nicotiana tabacum HOM05D003079 ORTHO05D003461 2.6e-10 68.9 104 45.2
Sp6g18060 Schrenkiella parvula HOM05D003079 ORTHO05D003461 3.4e-10 68.6 82 56.1
Dinv40917 Davidia involucrata HOM05D003079 ORTHO05D003461 4.4e-10 68.2 70 62.9
Nitab4.5_0000611g0170 Nicotiana tabacum HOM05D003079 ORTHO05D003461 4.4e-10 68.2 68 61.8
Glyma.04G113700 Glycine max HOM05D003079 ORTHO05D003461 5.8e-10 67.8 69 68.1
Nitab4.5_0001622g0150 Nicotiana tabacum HOM05D003079 ORTHO05D003461 5.8e-10 67.8 68 61.8
DCAR_013756 Daucus carota HOM05D003079 ORTHO05D003461 7.6e-10 67.4 105 44.8
AL8G31840 Arabidopsis lyrata HOM05D003079 ORTHO05D003461 9.9e-10 67.0 90 54.4
Oeu052026.1 Olea europaea HOM05D003079 ORTHO05D003461 2.2e-09 65.9 72 52.8
Aa31LG3G12120 Aethionema arabicum HOM05D003079 ORTHO05D003461 2.9e-09 65.5 69 59.4
Migut.H01709 Erythranthe guttata HOM05D003079 ORTHO05D003461 2.9e-09 65.5 73 58.9
Carub.0008s1653 Capsella rubella HOM05D003079 ORTHO05D003461 4.9e-09 64.7 70 58.6
MBI15_g44396_MAGBIO Magnolia biondii HOM05D003079 ORTHO05D003461 1.1e-08 63.5 66 54.5
PGSC0003DMG400008693 Solanum tuberosum HOM05D003079 ORTHO05D003461 1.1e-08 63.5 68 60.3
CAN.G492.58 Capsicum annuum HOM05D003079 ORTHO05D003461 1.4e-08 63.2 69 58.0
Glyma.06G321400 Glycine max HOM05D003079 ORTHO05D003461 1.4e-08 63.2 67 67.2
MSTRG.16132 Avicennia marina HOM05D003079 ORTHO05D003461 2.4e-08 62.4 72 47.2
CANSAT11G2157 Cannabis sativa HOM05D003079 ORTHO05D003461 7.1e-08 60.8 107 45.8
AT5G56210 Arabidopsis thaliana HOM05D003079 ORTHO05D003461 1.2e-07 60.1 98 48.0
Sc03g0011780 Simmondsia chinensis HOM05D003079 ORTHO05D003461 1.2e-07 60.1 103 45.6
Sopen10g001680 Solanum pennellii HOM05D003079 ORTHO05D003461 1.2e-07 60.1 68 58.8
vmacro09798 Vaccinium macrocarpon HOM05D003079 ORTHO05D003461 1.2e-07 60.1 94 44.7
VMungo1080G0483 Vigna mungo HOM05D003079 ORTHO05D003461 1.2e-07 60.1 58 70.7
PSO782G1655 Papaver somniferum HOM05D003079 ORTHO05D003461 2.1e-07 59.3 66 54.5
PSO063G6668 Papaver somniferum HOM05D003079 ORTHO05D003461 3.5e-07 58.5 66 53.0
Rhsim06G0235200 Rhododendron simsii HOM05D003079 ORTHO05D003461 3.5e-07 58.5 95 45.3
THA.LOC104811703 Tarenaya hassleriana HOM05D003079 ORTHO05D003461 3.5e-07 58.5 82 48.8
SGA_v2.0_scaffold92G28159 Striga asiatica HOM05D003079 ORTHO05D003461 4.6e-07 58.2 77 49.4
Phvul.L001609 Phaseolus vulgaris HOM05D003079 ORTHO05D003461 1.3e-06 56.6 101 49.5
Thhalv10013313m.g Eutrema salsugineum HOM05D003079 ORTHO05D003461 2.3e-06 55.8 94 48.9
Hund22967 Selenicereus undatus HOM05D003079 ORTHO05D003461 3.0e-06 55.5 100 45.0
arahy.Tifrunner.gnm1.ann1.FC0SK2 Arachis hypogaea HOM05D003079 ORTHO05D003461 3.9e-06 55.1 68 58.8
DCAR_017612 Daucus carota HOM05D003079 ORTHO05D003461 5.1e-06 54.7 75 48.0
Lalb_Chr15g0079931 Lupinus albus HOM05D003079 ORTHO05D003461 5.1e-06 54.7 59 66.1
Lj3g0020124 Lotus japonicus HOM05D003079 ORTHO05D003461 8.6e-06 53.9 69 59.4


User provided reference genes

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