Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_20235 Corylus avellana HOM05D006326 ORTHO05D007589 1.8e-255 885.6 488 100.0
CiPaw.09G048500 Carya illinoinensis HOM05D006326 ORTHO05D007589 7.2e-164 581.3 464 70.5
QL07p011201 Quercus lobata HOM05D006326 ORTHO05D007589 6.1e-139 498.4 465 64.7
CiPaw.10G040500 Carya illinoinensis HOM05D006326 ORTHO05D007589 5.5e-132 475.3 412 66.5
Atru.chr1.1394 Acer truncatum HOM05D006326 ORTHO05D007589 1.1e-119 434.5 473 58.6
CsaV3_4G029490 Cucumis sativus L. HOM05D006326 ORTHO05D007589 6.8e-114 415.2 468 57.1
Thecc.05G128800 Theobroma cacao HOM05D006326 ORTHO05D007589 1.4e-111 407.5 474 59.1
GSVIVG01033643001 Vitis vinifera HOM05D006326 ORTHO05D007589 5.4e-111 405.6 483 54.7
Dinv05303 Davidia involucrata HOM05D006326 ORTHO05D007589 2.3e-109 400.2 469 59.7
MD14G1089900 Malus domestica HOM05D006326 ORTHO05D007589 2.6e-105 386.7 477 53.0
ClCG04G005630 Citrullus lanatus HOM05D006326 ORTHO05D007589 5.4e-103 379.0 500 51.8
RcHm_v2.0_Chr6g0276151 Rosa chinensis HOM05D006326 ORTHO05D007589 1.1e-100 371.3 471 53.3
CSS0039389 Camellia sinensis var. sinensis HOM05D006326 ORTHO05D007589 9.5e-100 368.2 480 57.1
Dinv07946 Davidia involucrata HOM05D006326 ORTHO05D007589 1.3e-96 357.8 483 50.9
Potri.016G036000 Populus trichocarpa HOM05D006326 ORTHO05D007589 1.7e-93 347.4 468 51.9
FvH4_2g14070 Fragaria vesca HOM05D006326 ORTHO05D007589 2.5e-92 343.6 468 50.6
FAN20G2839 Fragaria x ananassa HOM05D006326 ORTHO05D007589 8.1e-91 338.6 468 50.4
COL.COLO4_37458 Corchorus olitorius HOM05D006326 ORTHO05D007589 4.0e-90 336.3 492 47.8
Gohir.D09G115200 Gossypium hirsutum HOM05D006326 ORTHO05D007589 3.4e-89 333.2 467 51.4
FAN15G3215 Fragaria x ananassa HOM05D006326 ORTHO05D007589 1.9e-87 327.4 467 49.7
Actinidia17957 Actinidia chinensis HOM05D006326 ORTHO05D007589 1.6e-86 324.3 473 51.6
Gorai.006G132800 Gossypium raimondii HOM05D006326 ORTHO05D007589 3.9e-85 319.7 467 50.3
Lj5g0016845 Lotus japonicus HOM05D006326 ORTHO05D007589 6.6e-85 318.9 462 48.5
Prupe.7G034100 Prunus persica HOM05D006326 ORTHO05D007589 6.6e-85 318.9 457 50.8
TAR623G0088 Trochodendron aralioides HOM05D006326 ORTHO05D007589 6.6e-85 318.9 495 47.3
Ca_05361_v3 Cicer arietinum L. HOM05D006326 ORTHO05D007589 8.7e-85 318.5 461 48.2
Psat6g129480 Pisum sativum HOM05D006326 ORTHO05D007589 1.3e-80 304.7 459 47.1
Duzib128G1973 Durio zibethinus HOM05D006326 ORTHO05D007589 4.9e-80 302.8 424 49.8
VMungo0720G1800 Vigna mungo HOM05D006326 ORTHO05D007589 2.4e-79 300.4 464 46.3
Lalb_Chr02g0156611 Lupinus albus HOM05D006326 ORTHO05D007589 6.7e-77 292.4 463 47.5
Cpa.g.sc92.89 Carica papaya HOM05D006326 ORTHO05D007589 5.6e-76 289.3 482 49.2
Manes.09G004100 Manihot esculenta HOM05D006326 ORTHO05D007589 9.6e-76 288.5 411 52.1
MELO3C019097.2 Cucumis melo HOM05D006326 ORTHO05D007589 6.9e-74 282.3 415 47.5
Potri.006G039900 Populus trichocarpa HOM05D006326 ORTHO05D007589 2.6e-73 280.4 465 45.8
Actinidia37880 Actinidia chinensis HOM05D006326 ORTHO05D007589 1.7e-72 277.7 419 49.9
Phvul.007G233400 Phaseolus vulgaris HOM05D006326 ORTHO05D007589 2.2e-72 277.3 462 44.4
Medtr1g050510 Medicago truncatula HOM05D006326 ORTHO05D007589 6.4e-72 275.8 458 45.0
arahy.Tifrunner.gnm1.ann1.Z1KKER Arachis hypogaea HOM05D006326 ORTHO05D007589 1.4e-71 274.6 464 44.2
arahy.Tifrunner.gnm1.ann1.0NJ1V1 Arachis hypogaea HOM05D006326 ORTHO05D007589 1.0e-69 268.5 460 43.3
Aqoxy1G00376 Aquilegia oxysepala HOM05D006326 ORTHO05D007589 1.8e-69 267.7 481 42.2
Sabra06G0026900 Salix brachista HOM05D006326 ORTHO05D007589 2.3e-69 267.3 463 44.7
SabraUnG0002500 Salix brachista HOM05D006326 ORTHO05D007589 2.3e-69 267.3 463 44.7
FAN24G3485 Fragaria x ananassa HOM05D006326 ORTHO05D007589 1.5e-65 254.6 417 45.6
Oeu057785.1 Olea europaea HOM05D006326 ORTHO05D007589 1.5e-65 254.6 476 44.1
Oeu022970.2 Olea europaea HOM05D006326 ORTHO05D007589 7.6e-65 252.3 466 43.6
Oeu057784.1 Olea europaea HOM05D006326 ORTHO05D007589 1.0e-64 251.9 476 44.1
Sed0018260 Sechium edule HOM05D006326 ORTHO05D007589 1.0e-64 251.9 398 46.5
TWI74G0746 Tripterygium wilfordii HOM05D006326 ORTHO05D007589 1.3e-64 251.5 421 45.4
Glyma.02G166100 Glycine max HOM05D006326 ORTHO05D007589 2.9e-64 250.4 409 44.3
Hma1.2p1_0252F.1_g102780 Hydrangea macrophylla HOM05D006326 ORTHO05D007589 3.8e-64 250.0 442 50.7
Ciclev10011438m.g Citrus clementina HOM05D006326 ORTHO05D007589 1.9e-63 247.7 415 48.9
Gohir.A09G118300 Gossypium hirsutum HOM05D006326 ORTHO05D007589 2.7e-62 243.8 414 46.1
DCAR_013645 Daucus carota HOM05D002003 ORTHO05D002037 1.9e-60 237.7 461 41.0
Glyma.10G102200 Glycine max HOM05D006326 ORTHO05D007589 1.3e-59 235.0 407 43.0
CSS0038712 Camellia sinensis var. sinensis HOM05D006326 ORTHO05D007589 1.1e-58 231.9 374 48.7
Peaxi162Scf00076g00325 Petunia axillaris HOM05D006326 ORTHO05D007589 1.4e-58 231.5 500 42.2
ATR0317G072 Amborella trichopoda HOM05D006326 ORTHO05D007589 5.9e-57 226.1 515 39.0
SalBow6G7225 Salvia bowleyana HOM05D006326 ORTHO05D007589 5.9e-57 226.1 463 41.5
TWI53G1954 Tripterygium wilfordii HOM05D006326 ORTHO05D007589 1.0e-56 225.3 417 44.8
Nitab4.5_0002982g0070 Nicotiana tabacum HOM05D006326 ORTHO05D007589 2.9e-56 223.8 479 42.0
CANSAT64G1393 Cannabis sativa HOM05D006326 ORTHO05D007589 3.8e-56 223.4 417 44.1
Nitab4.5_0000237g0060 Nicotiana tabacum HOM05D006326 ORTHO05D007589 1.9e-55 221.1 479 40.7
MSTRG.19798 Avicennia marina HOM05D006326 ORTHO05D007589 3.6e-54 216.9 484 40.1
Eucgr.B03116 Eucalyptus grandis HOM05D006326 ORTHO05D007589 4.6e-54 216.5 416 38.7
vmacro07781 Vaccinium macrocarpon HOM05D006326 ORTHO05D007589 1.1e-52 211.8 251 57.8
CAN.G51.3 Capsicum annuum HOM05D006326 ORTHO05D007589 4.3e-52 209.9 469 39.0
SGA_v2.0_scaffold69G23160 Striga asiatica HOM05D006326 ORTHO05D007589 4.1e-50 203.4 461 40.3
Rhsim03G0036800 Rhododendron simsii HOM05D006326 ORTHO05D007589 9.1e-50 202.2 424 41.0
Dinv01681 Davidia involucrata HOM05D006326 ORTHO05D007589 4.6e-46 189.9 372 42.5
AUR62018355 Chenopodium quinoa HOM05D006326 ORTHO05D007589 3.0e-45 187.2 461 43.6
Sp5g05840 Schrenkiella parvula HOM05D006326 ORTHO05D007589 6.7e-45 186.0 464 38.6
Lsat_1_v5_gn_9_29721 Lactuca sativa HOM05D006326 ORTHO05D007589 8.8e-45 185.7 311 47.6
ECA247G0820 Erigeron canadensis HOM05D006326 ORTHO05D007589 1.1e-44 185.3 249 52.6
AUR62030307 Chenopodium quinoa HOM05D006326 ORTHO05D007589 1.3e-43 181.8 463 42.5
Aa31LG10G11560 Aethionema arabicum HOM05D006326 ORTHO05D007589 2.4e-42 177.6 488 34.6
unitig_60.g25479 Utricularia gibba HOM05D006326 ORTHO05D007589 2.4e-42 177.6 465 39.1
Solyc12g020000.3 Solanum lycopersicum HOM05D006326 ORTHO05D007589 3.1e-42 177.2 475 38.7
AL5G38090 Arabidopsis lyrata HOM05D006326 ORTHO05D007589 2.9e-40 170.6 389 37.5
Nn7g36809 Nelumbo nucifera HOM05D006326 ORTHO05D007589 5.0e-40 169.9 404 37.4
Hund19089 Selenicereus undatus HOM05D006326 ORTHO05D007589 2.5e-39 167.5 424 42.0
TPR.G7607 Trifolium pratense HOM05D006326 ORTHO05D007589 3.2e-39 167.2 458 35.8
HanXRQChr15g0491141 Helianthus annuus HOM05D006326 ORTHO05D007589 9.4e-39 165.6 234 49.1
BcaC07g40122 Brassica carinata HOM05D006326 ORTHO05D007589 1.6e-38 164.9 277 44.4
Cc06_g19610 Coffea canephora HOM05D006326 ORTHO05D007589 6.1e-38 162.9 419 42.7
Migut.J01646 Erythranthe guttata HOM05D006326 ORTHO05D007589 7.9e-38 162.5 410 36.3
Sopen12g010520 Solanum pennellii HOM05D006326 ORTHO05D007589 2.3e-37 161.0 417 36.7
EL10Ac3g07247 Beta vulgaris HOM05D006326 ORTHO05D007589 3.0e-37 160.6 284 44.4
HPP92_019182 Vanilla planifolia HOM05D006326 ORTHO05D007589 1.1e-36 158.7 488 36.9
Carub.0005s2347 Capsella rubella HOM05D006326 ORTHO05D007589 2.0e-36 157.9 465 36.1
PSO384G3095 Papaver somniferum HOM05D006326 ORTHO05D007589 9.7e-36 155.6 427 36.3
PSO339G2802 Papaver somniferum HOM05D006326 ORTHO05D007589 1.3e-35 155.2 428 36.7
C08p31960 Brassica napus HOM05D004518 ORTHO05D005434 6.3e-35 152.9 330 39.7
BolC8t50813H Brassica oleracea HOM05D006326 ORTHO05D007589 6.3e-35 152.9 333 39.9
BcaC07g39981 Brassica carinata HOM05D006326 ORTHO05D007589 2.4e-34 151.0 336 39.6
CARHR166860 Cardamine hirsuta HOM05D006326 ORTHO05D007589 4.1e-34 150.2 443 35.9
Ah.13g076820 Amaranthus hybridus HOM05D002003 ORTHO05D002037 4.5e-33 146.7 463 39.7
SGA_v2.0_scaffold66G22355 Striga asiatica HOM05D006326 ORTHO05D007589 2.9e-32 144.1 134 60.4
SGA_v2.0_scaffold1000G53781 Striga asiatica HOM05D006326 ORTHO05D007589 3.8e-32 143.7 304 41.1
CDE04G2458 Ceratophyllum demersum HOM05D006326 ORTHO05D007589 5.0e-32 143.3 230 45.2
Pp3c14_4840 Physcomitrium patens HOM05D006326 ORTHO05D007589 1.6e-30 138.3 154 53.2
Sc13g0001090 Simmondsia chinensis HOM05D006326 ORTHO05D007589 4.7e-30 136.7 423 35.5
unitig_0.g603 Utricularia gibba HOM05D006326 ORTHO05D007589 6.1e-30 136.3 228 46.5
AagrBONN_evm.TU.Sc2ySwM_344.979 Anthoceros agrestis HOM05D006326 ORTHO05D007589 5.2e-29 133.3 227 44.5
Mapoly0069s0088 Marchantia polymorpha HOM05D006326 ORTHO05D007589 2.0e-28 131.3 241 42.3
SEGI_11590 Sequoiadendron giganteum HOM05D006326 ORTHO05D007589 9.1e-26 122.5 546 32.2
THA.LOC104815890 Tarenaya hassleriana HOM05D006326 ORTHO05D007589 9.1e-26 122.5 414 39.4
Medtr0722s0010 Medicago truncatula HOM05D006326 ORTHO05D007589 6.5e-24 116.3 76 78.9
Pp3c1_21670 Physcomitrium patens HOM05D006326 ORTHO05D007589 2.7e-22 110.9 114 54.4
Thhalv10005957m.g Eutrema salsugineum HOM05D006326 ORTHO05D007589 4.7e-22 110.2 415 32.5
Hma1.2p1_0975F.1_g243130 Hydrangea macrophylla HOM05D006326 ORTHO05D007589 4.7e-22 110.2 297 37.0
Hma1.2p1_0975F.1_g243140 Hydrangea macrophylla HOM05D006326 ORTHO05D007589 4.7e-22 110.2 297 37.0
Actinidia01833 Actinidia chinensis HOM05D006326 ORTHO05D007589 4.0e-21 107.1 72 79.2
SMO351G0508 Selaginella moellendorffii HOM05D006326 ORTHO05D007589 9.1e-18 95.9 156 46.2
CBR_g50470 Chara braunii HOM05D006326 ORTHO05D007589 1.6e-17 95.1 160 43.8
PGR142G2735 Punica granatum HOM05D006326 ORTHO05D007589 4.5e-17 93.6 403 33.5
A09p49570 Brassica napus HOM05D006326 ORTHO05D007589 1.1e-15 89.0 245 35.1
BraA09t40410Z Brassica rapa HOM05D006326 ORTHO05D007589 1.1e-15 89.0 245 35.1
Zm00001eb185630 Zea mays HOM05D006326 ORTHO05D007589 2.1e-14 84.7 338 33.4
CSS0022371 Camellia sinensis var. sinensis HOM05D006326 ORTHO05D007589 8.8e-13 79.3 64 67.2
Actinidia01832 Actinidia chinensis HOM05D006326 ORTHO05D007589 2.4e-10 71.2 75 56.0
Mapoly0021s0060 Marchantia polymorpha HOM05D006326 ORTHO05D007589 3.5e-09 67.4 99 42.4
SGA_v2.0_scaffold66G22262 Striga asiatica HOM05D006326 ORTHO05D007589 5.6e-07 60.1 441 28.6


User provided reference genes

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