Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_20176 Corylus avellana HOM05D000272 ORTHO05D164981 2.8e-53 212.2 154 100.0
Haze_20180 Corylus avellana HOM05D000272 ORTHO05D000164 5.4e-17 91.7 110 68.2
Manes.09G045600 Manihot esculenta HOM05D000272 ORTHO05D000164 1.4e-12 77.0 110 42.7
QL07p036613 Quercus lobata HOM05D000272 ORTHO05D000164 3.1e-12 75.9 110 57.3
Manes.08G033900 Manihot esculenta HOM05D000272 ORTHO05D000164 1.2e-11 73.9 103 43.7
CiPaw.09G021200 Carya illinoinensis HOM05D000272 ORTHO05D000164 1.5e-11 73.6 110 40.9
Cpa.g.sc104.27 Carica papaya HOM05D000272 ORTHO05D000164 1.7e-10 70.1 111 38.7
Hma1.2p1_0079F.1_g041776 Hydrangea macrophylla HOM05D000272 ORTHO05D000164 8.4e-10 67.8 110 54.5
Hma1.2p1_0079F.1_g041800 Hydrangea macrophylla HOM05D000272 ORTHO05D000164 8.4e-10 67.8 110 54.5
Lj1g0016675 Lotus japonicus HOM05D000272 ORTHO05D000164 8.4e-10 67.8 110 46.4
Sabra16G0070400 Salix brachista HOM05D000272 ORTHO05D000164 8.4e-10 67.8 110 45.5
Sabra16G0072500 Salix brachista HOM05D000272 ORTHO05D000164 8.4e-10 67.8 110 45.5
Duzib106G1148 Durio zibethinus HOM05D000272 ORTHO05D000164 1.1e-09 67.4 110 46.4
Atru.chr8.1350 Acer truncatum HOM05D000272 ORTHO05D000164 2.4e-09 66.2 111 36.9
Sabra06G0156100 Salix brachista HOM05D000272 ORTHO05D000164 2.4e-09 66.2 110 39.1
Potri.006G203000 Populus trichocarpa HOM05D000272 ORTHO05D000164 3.2e-09 65.9 110 38.2
Potri.016G069700 Populus trichocarpa HOM05D000272 ORTHO05D000164 5.5e-09 65.1 110 39.1
Thecc.05G105000 Theobroma cacao HOM05D000272 ORTHO05D000164 5.5e-09 65.1 110 72.7
VMungo1383G0050 Vigna mungo HOM05D000272 ORTHO05D000164 9.3e-09 64.3 110 35.5
DCAR_020703 Daucus carota HOM05D000272 ORTHO05D000164 1.2e-08 63.9 110 55.5
TWI74G1620 Tripterygium wilfordii HOM05D000272 ORTHO05D000164 1.2e-08 63.9 120 35.8
Ca_09059_v3 Cicer arietinum L. HOM05D000272 ORTHO05D000164 2.1e-08 63.2 111 37.8
Duzib093G1912 Durio zibethinus HOM05D000272 ORTHO05D000164 2.1e-08 63.2 116 68.1
Phvul.001G195800 Phaseolus vulgaris HOM05D000272 ORTHO05D000164 2.1e-08 63.2 110 35.5
Ciclev10011201m.g Citrus clementina HOM05D000272 ORTHO05D000164 2.7e-08 62.8 113 36.3
MD12G1040700 Malus domestica HOM05D000272 ORTHO05D000164 2.7e-08 62.8 110 56.4
Oeu035649.1 Olea europaea HOM05D000272 ORTHO05D000164 2.7e-08 62.8 111 35.1
Actinidia06183 Actinidia chinensis HOM05D000272 ORTHO05D000164 3.5e-08 62.4 110 50.9
Gohir.A09G133900 Gossypium hirsutum HOM05D000272 ORTHO05D000164 3.5e-08 62.4 110 35.5
Prupe.7G094300 Prunus persica HOM05D000272 ORTHO05D000164 4.6e-08 62.0 110 37.3
Gohir.D09G130300 Gossypium hirsutum HOM05D000272 ORTHO05D000164 6.0e-08 61.6 110 36.4
Dinv31762 Davidia involucrata HOM05D000272 ORTHO05D000164 1.0e-07 60.8 110 37.3
CANSAT64G0715 Cannabis sativa HOM05D000272 ORTHO05D000164 1.8e-07 60.1 111 36.9
Glyma.02G196500 Glycine max HOM05D000272 ORTHO05D000164 1.8e-07 60.1 110 35.5
TWI53G0362 Tripterygium wilfordii HOM05D000272 ORTHO05D000164 1.8e-07 60.1 121 35.5
TAR369G0286 Trochodendron aralioides HOM05D000272 ORTHO05D000164 1.8e-07 60.1 111 35.1
Nn2g14315 Nelumbo nucifera HOM05D000272 ORTHO05D000164 2.3e-07 59.7 104 43.3
CiPaw.10G017900 Carya illinoinensis HOM05D000272 ORTHO05D000164 3.0e-07 59.3 110 74.5
Duzib128G1756 Durio zibethinus HOM05D000272 ORTHO05D000164 3.0e-07 59.3 116 49.1
Medtr7g106320 Medicago truncatula HOM05D000272 ORTHO05D000164 3.9e-07 58.9 110 34.5
ECA233G6233 Erigeron canadensis HOM05D000272 ORTHO05D000164 6.7e-07 58.2 118 35.6
MD14G1039700 Malus domestica HOM05D000272 ORTHO05D000164 6.7e-07 58.2 110 50.9
Glyma.19G199500 Glycine max HOM05D000272 ORTHO05D000164 8.7e-07 57.8 110 47.3
Gohir.A04G057800 Gossypium hirsutum HOM05D000272 ORTHO05D000164 8.7e-07 57.8 110 35.5
Dinv12340 Davidia involucrata HOM05D000272 ORTHO05D000164 1.1e-06 57.4 104 34.6
Gohir.D04G091400 Gossypium hirsutum HOM05D000272 ORTHO05D000164 1.1e-06 57.4 110 35.5
Gorai.009G396900 Gossypium raimondii HOM05D000272 ORTHO05D000164 1.1e-06 57.4 110 35.5
Nn6g34684 Nelumbo nucifera HOM05D000272 ORTHO05D000164 1.1e-06 57.4 111 33.3
Psat3g028480 Pisum sativum HOM05D000272 ORTHO05D000164 1.1e-06 57.4 110 33.6
Peaxi162Scf00910g00017 Petunia axillaris HOM05D000272 ORTHO05D000164 1.5e-06 57.0 106 35.8
CiPaw.13G129300 Carya illinoinensis HOM05D000272 ORTHO05D000164 1.9e-06 56.6 113 35.4
Dinv33532 Davidia involucrata HOM05D000272 ORTHO05D000164 1.9e-06 56.6 113 33.6
Glyma.10G081700 Glycine max HOM05D000272 ORTHO05D000164 1.9e-06 56.6 110 33.6
Gohir.A01G201200 Gossypium hirsutum HOM05D000272 ORTHO05D000164 4.3e-06 55.5 110 41.8
Gohir.D01G191100 Gossypium hirsutum HOM05D000272 ORTHO05D000164 4.3e-06 55.5 110 48.2
Gorai.002G234900 Gossypium raimondii HOM05D000272 ORTHO05D000164 4.3e-06 55.5 110 46.4
Oeu036106.1 Olea europaea HOM05D000272 ORTHO05D000164 4.3e-06 55.5 119 31.9
TAR623G0415 Trochodendron aralioides HOM05D000272 ORTHO05D000164 5.6e-06 55.1 114 34.2
DCAR_013443 Daucus carota HOM05D000272 ORTHO05D000164 7.4e-06 54.7 110 32.7
Nitab4.5_0000077g0060 Nicotiana tabacum HOM05D000272 ORTHO05D000164 9.6e-06 54.3 103 35.0


User provided reference genes

Program Settings