Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_20129 Corylus avellana HOM05D001186 ORTHO05D000971 4.5e-49 197.6 98 100.0
Cfa020066 Carpinus fangiana HOM05D001186 ORTHO05D043666 1.2e-41 172.9 99 91.9
CiPaw.10G021400 Carya illinoinensis HOM05D001186 ORTHO05D000971 1.7e-19 99.4 100 61.0
CiPaw.09G024300 Carya illinoinensis HOM05D001186 ORTHO05D000971 4.7e-14 81.3 97 53.6
Haze_20128 Corylus avellana HOM05D001186 ORTHO05D000971 8.3e-11 70.5 90 51.1
ClCG10G017960 Citrullus lanatus HOM05D001186 ORTHO05D000971 1.8e-10 69.3 79 51.9
CsaV3_3G038330 Cucumis sativus L. HOM05D001186 ORTHO05D000971 1.8e-10 69.3 70 54.3
Potri.006G199300 Populus trichocarpa HOM05D001186 ORTHO05D000971 5.4e-10 67.8 67 58.2
Cfa020067 Carpinus fangiana HOM05D001186 ORTHO05D000971 9.1e-10 67.0 77 54.5
Thecc.05G110300 Theobroma cacao HOM05D001186 ORTHO05D000971 2.7e-09 65.5 72 51.4
Ciclev10013749m.g Citrus clementina HOM05D001186 ORTHO05D000971 3.5e-09 65.1 83 51.8
Sabra06G0153200 Salix brachista HOM05D001186 ORTHO05D000971 4.5e-09 64.7 74 52.7
QL06p036159 Quercus lobata HOM05D001186 ORTHO05D000971 1.3e-08 63.2 50 66.0
QL07p026339 Quercus lobata HOM05D001186 ORTHO05D000971 1.3e-08 63.2 50 66.0
COL.COLO4_29493 Corchorus olitorius HOM05D001186 ORTHO05D000971 2.2e-08 62.4 91 47.3
Glyma.19G202300 Glycine max HOM05D001186 ORTHO05D000971 2.2e-08 62.4 77 45.5
Hma1.2p1_0127F.1_g059740 Hydrangea macrophylla HOM05D038348 ORTHO05D000971 2.2e-08 62.4 55 60.0
Duzib093G1110 Durio zibethinus HOM05D001186 ORTHO05D000971 2.9e-08 62.0 73 52.1
Manes.08G037400 Manihot esculenta HOM05D001186 ORTHO05D000971 3.8e-08 61.6 89 48.3
Duzib128G1674 Durio zibethinus HOM05D001186 ORTHO05D000971 5.0e-08 61.2 80 48.8
Sed0014716 Sechium edule HOM05D001186 ORTHO05D000971 5.0e-08 61.2 50 62.0
Gohir.D01G189650 Gossypium hirsutum HOM05D001186 ORTHO05D000971 1.5e-07 59.7 78 48.7
Gohir.D07G211466 Gossypium hirsutum HOM05D001186 ORTHO05D000971 1.5e-07 59.7 78 48.7
Gorai.002G233400 Gossypium raimondii HOM05D001186 ORTHO05D000971 1.5e-07 59.7 78 48.7
TPR.G33348 Trifolium pratense HOM05D000033 ORTHO05D001999 3.2e-07 58.5 81 42.0
Glyma.03G204900 Glycine max HOM05D001186 ORTHO05D000971 4.2e-07 58.2 66 50.0
Gorai.002G154000 Gossypium raimondii HOM05D001186 ORTHO05D000971 5.5e-07 57.8 54 55.6
Lsat_1_v5_gn_6_34220 Lactuca sativa HOM05D001186 ORTHO05D000971 7.2e-07 57.4 60 51.7
FAN09G1764 Fragaria x ananassa HOM05D004834 ORTHO05D006247 9.4e-07 57.0 75 42.7
TAR623G0067 Trochodendron aralioides HOM05D001186 ORTHO05D000971 9.4e-07 57.0 50 56.0
TAR369G0643 Trochodendron aralioides HOM05D001186 ORTHO05D000971 1.2e-06 56.6 66 53.0
AT1G68450 Arabidopsis thaliana HOM05D001186 ORTHO05D000971 1.6e-06 56.2 66 51.5
Gohir.A01G199550 Gossypium hirsutum HOM05D001186 ORTHO05D000971 1.6e-06 56.2 71 49.3
Medtr1g028910 Medicago truncatula HOM05D001186 ORTHO05D000971 1.6e-06 56.2 73 43.8
Carub.0002s1496 Capsella rubella HOM05D001186 ORTHO05D000971 2.1e-06 55.8 47 59.6
Gohir.D01G123101 Gossypium hirsutum HOM05D001186 ORTHO05D000971 2.1e-06 55.8 54 53.7
Sp5g23520 Schrenkiella parvula HOM05D001186 ORTHO05D000971 2.1e-06 55.8 88 40.9
Eucgr.A02544 Eucalyptus grandis HOM05D001186 ORTHO05D000971 2.7e-06 55.5 56 53.6
FAN02G0442 Fragaria x ananassa HOM05D001186 ORTHO05D000971 2.7e-06 55.5 75 41.3
FAN05G4110 Fragaria x ananassa HOM05D001186 ORTHO05D000971 3.6e-06 55.1 75 41.3
HPP92_016162 Vanilla planifolia HOM05D001186 ORTHO05D000971 3.6e-06 55.1 49 55.1
HPP92_026215 Vanilla planifolia HOM05D001186 ORTHO05D000971 3.6e-06 55.1 49 55.1
Sed0010828 Sechium edule HOM05D001186 ORTHO05D000971 4.7e-06 54.7 76 46.1
HPP92_011922 Vanilla planifolia HOM05D001186 ORTHO05D000971 4.7e-06 54.7 75 44.0
CiPaw.15G019500 Carya illinoinensis HOM05D001186 ORTHO05D000971 6.1e-06 54.3 62 51.6
FAN05G1048 Fragaria x ananassa HOM05D001186 ORTHO05D000971 6.1e-06 54.3 75 41.3
Lalb_Chr23g0271401 Lupinus albus HOM05D001186 ORTHO05D000971 6.1e-06 54.3 74 47.3
FvH4_6g21030 Fragaria vesca HOM05D001186 ORTHO05D000971 8.0e-06 53.9 75 40.0
FAN14G0712 Fragaria x ananassa HOM05D001186 ORTHO05D000971 8.0e-06 53.9 75 40.0


User provided reference genes

Program Settings