Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_20110 Corylus avellana HOM05D006703 ORTHO05D008389 7.3e-101 370.5 185 100.0
Cfa020082 Carpinus fangiana HOM05D006703 ORTHO05D008389 2.2e-89 332.4 186 90.3
CiPaw.10G019700 Carya illinoinensis HOM05D006703 ORTHO05D008389 4.3e-61 238.4 190 65.8
Prupe.7G090900 Prunus persica HOM05D006703 ORTHO05D008389 3.7e-60 235.3 193 63.2
QL07p026854 Quercus lobata HOM05D006703 ORTHO05D008389 1.8e-59 233.0 201 62.7
FAN05G2374 Fragaria x ananassa HOM05D006703 ORTHO05D008389 1.7e-57 226.5 196 59.7
CiPaw.09G023100 Carya illinoinensis HOM05D006703 ORTHO05D008389 2.2e-57 226.1 190 62.6
FAN09G4763 Fragaria x ananassa HOM05D006703 ORTHO05D008389 4.9e-57 224.9 196 59.2
FAN05G3633 Fragaria x ananassa HOM05D006703 ORTHO05D008389 8.4e-57 224.2 196 59.2
MD12G1044300 Malus domestica HOM05D006703 ORTHO05D008389 8.4e-57 224.2 194 60.8
RcHm_v2.0_Chr3g0477081 Rosa chinensis HOM05D006703 ORTHO05D008389 1.9e-56 223.0 196 57.7
FAN14G3264 Fragaria x ananassa HOM05D006703 ORTHO05D008389 4.2e-56 221.9 196 58.2
FvH4_6g20830 Fragaria vesca HOM05D006703 ORTHO05D008389 1.2e-55 220.3 196 58.2
MD14G1043200 Malus domestica HOM05D006703 ORTHO05D008389 1.6e-55 219.9 194 60.3
RcHm_v2.0_Chr3g0477171 Rosa chinensis HOM05D006703 ORTHO05D008389 4.6e-55 218.4 186 58.1
Gohir.D01G190000 Gossypium hirsutum HOM05D006703 ORTHO05D008389 8.7e-54 214.2 186 56.5
Gorai.002G233800 Gossypium raimondii HOM05D006703 ORTHO05D008389 1.9e-53 213.0 186 55.9
Hma1.2p1_0401F.1_g144790 Hydrangea macrophylla HOM05D006703 ORTHO05D008389 5.7e-53 211.5 195 57.9
Manes.08G036200 Manihot esculenta HOM05D006703 ORTHO05D008389 1.3e-52 210.3 200 56.5
Gohir.A01G200000 Gossypium hirsutum HOM05D006703 ORTHO05D008389 1.6e-52 209.9 186 55.9
GSVIVG01022605001 Vitis vinifera HOM05D006703 ORTHO05D008389 3.7e-52 208.8 197 57.4
Duzib106G1644 Durio zibethinus HOM05D006703 ORTHO05D008389 2.4e-51 206.1 186 57.0
Eucgr.K01914 Eucalyptus grandis HOM05D006703 ORTHO05D008389 4.1e-51 205.3 202 53.0
Nitab4.5_0000721g0180 Nicotiana tabacum HOM05D006703 ORTHO05D008389 4.1e-51 205.3 202 55.0
Sabra16G0068200 Salix brachista HOM05D006703 ORTHO05D008389 6.9e-51 204.5 192 57.3
TWI74G0187 Tripterygium wilfordii HOM05D006703 ORTHO05D008389 6.9e-51 204.5 213 52.6
Lj1A1058G53 Lonicera japonica HOM05D006703 ORTHO05D008389 9.0e-51 204.1 199 54.8
Potri.016G066800 Populus trichocarpa HOM05D006703 ORTHO05D008389 9.0e-51 204.1 194 57.7
Duzib093G0046 Durio zibethinus HOM05D006703 ORTHO05D008389 1.2e-50 203.8 186 55.9
Thecc.05G108700 Theobroma cacao HOM05D006703 ORTHO05D008389 1.5e-50 203.4 187 55.6
Actinidia37767 Actinidia chinensis HOM05D006703 ORTHO05D008389 4.5e-50 201.8 198 53.5
Nitab4.5_0001918g0020 Nicotiana tabacum HOM05D006703 ORTHO05D008389 5.9e-50 201.4 202 55.4
HanXRQChr02g0052921 Helianthus annuus HOM05D006703 ORTHO05D008389 1.0e-49 200.7 193 54.4
Lalb_Chr01g0017771 Lupinus albus HOM05D006703 ORTHO05D008389 1.0e-49 200.7 161 60.9
Manes.09G042800 Manihot esculenta HOM05D006703 ORTHO05D008389 1.3e-49 200.3 194 59.3
ClCG10G018080 Citrullus lanatus HOM05D006703 ORTHO05D008389 2.2e-49 199.5 196 53.6
Sed0006927 Sechium edule HOM05D006703 ORTHO05D008389 2.9e-49 199.1 189 56.6
Hund14986 Selenicereus undatus HOM05D006703 ORTHO05D008389 2.9e-49 199.1 196 49.0
FAN02G3199 Fragaria x ananassa HOM05D006703 ORTHO05D008389 1.9e-48 196.4 163 62.0
TWI77G0507 Tripterygium wilfordii HOM05D006703 ORTHO05D008389 1.9e-48 196.4 202 52.5
MSTRG.26583 Avicennia marina HOM05D006703 ORTHO05D008389 2.5e-48 196.1 186 55.4
ECA233G5710 Erigeron canadensis HOM05D006703 ORTHO05D008389 4.2e-48 195.3 202 52.5
Phvul.001G197500 Phaseolus vulgaris HOM05D006703 ORTHO05D008389 4.2e-48 195.3 187 54.5
DCAR_013453 Daucus carota HOM05D006703 ORTHO05D008389 7.2e-48 194.5 192 50.5
SGA_v2.0_scaffold31G12818 Striga asiatica HOM05D006703 ORTHO05D008389 2.7e-47 192.6 190 53.2
Nn2g14390 Nelumbo nucifera HOM05D006703 ORTHO05D008389 4.6e-47 191.8 172 54.7
PGR004G0398 Punica granatum HOM05D006703 ORTHO05D008389 4.6e-47 191.8 195 53.8
TPR.G34442 Trifolium pratense HOM05D006703 ORTHO05D008389 4.6e-47 191.8 201 53.2
Oeu020165.3 Olea europaea HOM05D006703 ORTHO05D008389 1.0e-46 190.7 242 48.8
MSTRG.19329 Avicennia marina HOM05D006703 ORTHO05D008389 8.7e-46 187.6 199 50.8
MELO3C009564.2 Cucumis melo HOM05D006703 ORTHO05D008389 1.5e-45 186.8 195 49.7
Hund10833 Selenicereus undatus HOM05D006703 ORTHO05D008389 1.5e-45 186.8 197 50.8
TAR636G3193 Trochodendron aralioides HOM05D004977 ORTHO05D006454 1.5e-45 186.8 174 55.2
PGSC0003DMG400028230 Solanum tuberosum HOM05D006703 ORTHO05D008389 1.9e-45 186.4 200 51.0
CANSAT64G1940 Cannabis sativa HOM05D006703 ORTHO05D008389 7.4e-45 184.5 196 49.5
Sopen10g032260 Solanum pennellii HOM05D006703 ORTHO05D008389 7.4e-45 184.5 200 50.5
Ca_09072_v3 Cicer arietinum L. HOM05D006703 ORTHO05D008389 9.7e-45 184.1 166 57.8
Lj1g0009334 Lotus japonicus HOM05D006703 ORTHO05D008389 9.7e-45 184.1 205 50.7
Rhsim03G0062400 Rhododendron simsii HOM05D006703 ORTHO05D008389 2.2e-44 183.0 195 51.8
COL.COLO4_29515 Corchorus olitorius HOM05D006703 ORTHO05D008389 3.7e-44 182.2 188 52.7
CsaV3_3G038210 Cucumis sativus L. HOM05D006703 ORTHO05D008389 4.8e-44 181.8 199 50.8
Sed0010784 Sechium edule HOM05D006703 ORTHO05D008389 4.8e-44 181.8 201 48.3
EL10Ac5g11822 Beta vulgaris HOM05D006703 ORTHO05D008389 1.4e-43 180.3 199 50.3
HanXRQChr13g0398671 Helianthus annuus HOM05D006703 ORTHO05D008389 1.4e-43 180.3 205 47.8
Medtr7g106660 Medicago truncatula HOM05D006703 ORTHO05D008389 1.8e-43 179.9 196 52.6
Solyc10g081750.1 Solanum lycopersicum HOM05D006703 ORTHO05D008389 2.4e-43 179.5 200 49.0
Atru.chr8.1299 Acer truncatum HOM05D006703 ORTHO05D008389 3.1e-43 179.1 183 52.5
Peaxi162Scf00203g00910 Petunia axillaris HOM05D006703 ORTHO05D008389 2.0e-42 176.4 180 52.8
Ah.12g059450 Amaranthus hybridus HOM05D001890 ORTHO05D003442 5.9e-42 174.9 202 48.5
arahy.Tifrunner.gnm1.ann1.8DDT0E Arachis hypogaea HOM05D006703 ORTHO05D008389 1.0e-41 174.1 208 48.6
AUR62030691 Chenopodium quinoa HOM05D006703 ORTHO05D008389 1.3e-41 173.7 200 48.5
Cc06_g06870 Coffea canephora HOM05D006703 ORTHO05D008389 1.3e-41 173.7 227 44.9
arahy.Tifrunner.gnm1.ann1.W58RTV Arachis hypogaea HOM05D006703 ORTHO05D008389 1.7e-41 173.3 208 48.1
VMungo1383G2242 Vigna mungo HOM05D001890 ORTHO05D003442 2.9e-41 172.6 190 49.5
EL10Ac9g21006 Beta vulgaris HOM05D006703 ORTHO05D008389 5.0e-41 171.8 200 49.0
Glyma.03G204000 Glycine max HOM05D006703 ORTHO05D008389 8.5e-41 171.0 193 48.2
SGA_v2.0_scaffold392G50677 Striga asiatica HOM05D006703 ORTHO05D008389 3.6e-39 165.6 185 49.2
Migut.J00741 Erythranthe guttata HOM05D006703 ORTHO05D008389 1.0e-38 164.1 205 49.3
Sc22g0003150 Simmondsia chinensis HOM05D006703 ORTHO05D008389 1.8e-38 163.3 169 49.1
Aa31LG5G21040 Aethionema arabicum HOM05D006703 ORTHO05D008389 1.1e-37 160.6 195 45.1
Thhalv10017281m.g Eutrema salsugineum HOM05D006703 ORTHO05D008389 1.5e-37 160.2 199 44.2
vmacro07494 Vaccinium macrocarpon HOM05D006703 ORTHO05D008389 3.3e-37 159.1 286 36.0
Os01g0771200 Oryza sativa ssp. japonica HOM05D006703 ORTHO05D008389 9.7e-37 157.5 202 44.6
Zm00001eb151930 Zea mays HOM05D006703 ORTHO05D008389 9.7e-37 157.5 160 50.0
Psat3g028120 Pisum sativum HOM05D006703 ORTHO05D008389 3.7e-36 155.6 193 46.6
BolC4t27966H Brassica oleracea HOM05D006703 ORTHO05D008389 2.4e-35 152.9 206 41.7
BraA04t18236Z Brassica rapa HOM05D006703 ORTHO05D008389 3.1e-35 152.5 206 41.7
MBI05_g29094_MAGBIO Magnolia biondii HOM05D006703 ORTHO05D008389 3.1e-35 152.5 159 49.7
BcaC02g07656 Brassica carinata HOM05D006703 ORTHO05D008389 6.9e-35 151.4 206 41.3
C03p23140 Brassica napus HOM05D006703 ORTHO05D008389 6.9e-35 151.4 199 43.7
PSO017G1234 Papaver somniferum HOM05D006703 ORTHO05D008389 6.9e-35 151.4 177 45.2
A04p27380 Brassica napus HOM05D006703 ORTHO05D008389 9.1e-35 151.0 208 42.8
BraA03t11234Z Brassica rapa HOM05D006703 ORTHO05D008389 2.0e-34 149.8 199 42.7
C04p64910 Brassica napus HOM05D006703 ORTHO05D008389 3.4e-34 149.1 206 40.8
ATR0697G151 Amborella trichopoda HOM05D006703 ORTHO05D008389 4.5e-34 148.7 145 50.3
A03p19820 Brassica napus HOM05D006703 ORTHO05D008389 5.9e-34 148.3 199 42.7
BcaB06g28891 Brassica carinata HOM05D006703 ORTHO05D008389 1.0e-33 147.5 201 44.3
BcaC01g05692 Brassica carinata HOM05D006703 ORTHO05D008389 1.3e-33 147.1 203 42.9
BolC3t14715H Brassica oleracea HOM05D006703 ORTHO05D008389 1.3e-33 147.1 203 42.9
Sp4g18150 Schrenkiella parvula HOM05D006703 ORTHO05D008389 1.3e-33 147.1 202 40.1
AUR62036335 Chenopodium quinoa HOM05D006703 ORTHO05D008389 2.2e-33 146.4 202 41.1
CARHR130150 Cardamine hirsuta HOM05D006703 ORTHO05D008389 2.9e-33 146.0 197 44.2
THA.LOC104823512 Tarenaya hassleriana HOM05D006703 ORTHO05D008389 8.5e-33 144.4 194 42.3
AL4G32000 Arabidopsis lyrata HOM05D006703 ORTHO05D008389 4.2e-32 142.1 203 43.8
AT2G35900 Arabidopsis thaliana HOM05D006703 ORTHO05D008389 9.4e-32 141.0 203 41.9
Carub.0004s1765 Capsella rubella HOM05D006703 ORTHO05D008389 1.6e-31 140.2 203 42.4
Aqoxy1G00585 Aquilegia oxysepala HOM05D006703 ORTHO05D008389 4.7e-31 138.7 207 42.0
Dinv25069 Davidia involucrata HOM05D001890 ORTHO05D003442 6.7e-30 134.8 130 55.4
CDE10G0766 Ceratophyllum demersum HOM05D006703 ORTHO05D008389 6.3e-28 128.3 143 47.6
Actinidia03970 Actinidia chinensis HOM05D006703 ORTHO05D008389 8.2e-28 127.9 162 46.3
Actinidia03862 Actinidia chinensis HOM05D006703 ORTHO05D008389 3.1e-27 125.9 125 54.4
unitig_749.g14212 Utricularia gibba HOM05D006703 ORTHO05D008389 5.9e-26 121.7 144 45.1
Oeu045018.1 Olea europaea HOM05D006703 ORTHO05D008389 1.8e-19 100.1 83 57.8
Dinv16712 Davidia involucrata HOM05D006703 ORTHO05D008389 1.3e-12 77.4 62 59.7
SHI28311 Sapria himalayana HOM05D006703 ORTHO05D008389 7.0e-11 71.6 130 43.1
AagrBONN_evm.TU.Sc2ySwM_369.455 Anthoceros agrestis HOM05D006703 ORTHO05D008389 2.9e-09 66.2 176 34.1
Glyma.19G201366 Glycine max HOM05D006703 ORTHO05D008389 2.9e-09 66.2 125 40.0
SEGI_14783 Sequoiadendron giganteum HOM05D000064 ORTHO05D008389 5.0e-09 65.5 61 54.1
Pp3c9_17430 Physcomitrium patens HOM05D006703 ORTHO05D008389 1.6e-07 60.5 103 40.8
CDE10G0313 Ceratophyllum demersum HOM05D006703 ORTHO05D001378 4.7e-07 58.9 128 30.5
SEGI_41401 Sequoiadendron giganteum HOM05D006703 ORTHO05D008389 4.0e-06 55.8 38 57.9


User provided reference genes

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