Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_19982 Corylus avellana HOM05D000100 ORTHO05D164200 2.1e-74 282.3 151 100.0
Cfa008904 Carpinus fangiana HOM05D000100 ORTHO05D004702 2.6e-32 142.5 108 72.2
Haze_11979 Corylus avellana HOM05D006961 ORTHO05D004702 1.4e-30 136.7 108 70.4
Haze_11933 Corylus avellana HOM05D002318 ORTHO05D004713 7.9e-29 131.0 108 68.5
Cfa008906 Carpinus fangiana HOM05D000100 ORTHO05D004702 2.3e-28 129.4 108 66.7
CiPaw.06G090200 Carya illinoinensis HOM05D000100 ORTHO05D004702 6.3e-18 94.7 112 52.7
CiPaw.06G090300 Carya illinoinensis HOM05D000100 ORTHO05D004702 2.6e-16 89.4 112 47.3
Lalb_Chr17g0341021 Lupinus albus HOM05D000100 ORTHO05D004702 1.7e-15 86.7 135 43.0
Psat2g128120 Pisum sativum HOM05D000100 ORTHO05D004702 5.5e-14 81.6 109 47.7
Thecc.02G335900 Theobroma cacao HOM05D000100 ORTHO05D004702 2.1e-13 79.7 115 43.5
Lj2g0007579 Lotus japonicus HOM05D000100 ORTHO05D004702 1.0e-12 77.4 109 44.0
CANSAT01G2651 Cannabis sativa HOM05D000100 ORTHO05D004702 1.8e-12 76.6 163 36.2
TPR.G39983 Trifolium pratense HOM05D000100 ORTHO05D004702 1.8e-12 76.6 110 44.5
Aqoxy3G03555 Aquilegia oxysepala HOM05D000100 ORTHO05D004702 4.0e-12 75.5 113 42.5
Medtr4g082820 Medicago truncatula HOM05D000100 ORTHO05D004702 4.0e-12 75.5 144 36.1
Thecc.02G336100 Theobroma cacao HOM05D000100 ORTHO05D004702 1.5e-11 73.6 112 42.9
COL.COLO4_27928 Corchorus olitorius HOM05D000100 ORTHO05D004702 2.0e-11 73.2 118 40.7
Lj2g0020882 Lotus japonicus HOM05D000100 ORTHO05D004702 3.3e-11 72.4 114 42.1
Duzib268G1512 Durio zibethinus HOM05D000100 ORTHO05D004702 1.7e-10 70.1 114 40.4
Sed0003026 Sechium edule HOM05D000100 ORTHO05D004702 1.4e-09 67.0 108 39.8
Atru.chr11.1687 Acer truncatum HOM05D000100 ORTHO05D004702 5.3e-09 65.1 148 35.1
TWI75G1492 Tripterygium wilfordii HOM05D000100 ORTHO05D004702 5.3e-09 65.1 107 39.3
Atru.chr11.1686 Acer truncatum HOM05D000100 ORTHO05D004702 1.2e-08 63.9 113 39.8
Medtr6g078320 Medicago truncatula HOM05D000100 ORTHO05D004702 1.2e-08 63.9 135 36.3
arahy.Tifrunner.gnm1.ann1.5S4EZI Arachis hypogaea HOM05D000100 ORTHO05D004702 1.6e-08 63.5 109 39.4
Glyma.16G212000 Glycine max HOM05D000100 ORTHO05D004702 1.6e-08 63.5 117 40.2
Medtr4g082810 Medicago truncatula HOM05D000100 ORTHO05D004702 2.7e-08 62.8 110 36.4
Thecc.02G336200 Theobroma cacao HOM05D000100 ORTHO05D004702 3.5e-08 62.4 116 36.2
ClCG05G023870 Citrullus lanatus HOM05D000100 ORTHO05D004702 5.9e-08 61.6 155 32.3
Nn3g17373 Nelumbo nucifera HOM05D000100 ORTHO05D004702 5.9e-08 61.6 109 39.4
Nn2g12291 Nelumbo nucifera HOM05D000100 ORTHO05D004702 7.7e-08 61.2 115 37.4
Sabra04G0066700 Salix brachista HOM05D000100 ORTHO05D004702 7.7e-08 61.2 115 37.4
CsaV3_5G033150 Cucumis sativus L. HOM05D000100 ORTHO05D004702 1.0e-07 60.8 113 34.5
Ciclev10031419m.g Citrus clementina HOM05D000100 ORTHO05D004702 1.7e-07 60.1 110 36.4
Manes.02G050500 Manihot esculenta HOM05D000100 ORTHO05D004702 1.7e-07 60.1 114 40.4
Potri.004G126000 Populus trichocarpa HOM05D000100 ORTHO05D004702 3.8e-07 58.9 118 39.0
COL.COLO4_27929 Corchorus olitorius HOM05D000100 ORTHO05D004702 5.0e-07 58.5 109 36.7
ATR0111G030 Amborella trichopoda HOM05D000100 ORTHO05D004702 6.5e-07 58.2 112 34.8
Gohir.A13G080100 Gossypium hirsutum HOM05D000100 ORTHO05D004702 6.5e-07 58.2 108 36.1
Ca_18817_v3 Cicer arietinum L. HOM05D000100 ORTHO05D004702 1.1e-06 57.4 165 32.1
MELO3C012135.2 Cucumis melo HOM05D000100 ORTHO05D004702 1.1e-06 57.4 113 32.7
Dinv33803 Davidia involucrata HOM05D000100 ORTHO05D004702 1.1e-06 57.4 119 37.8
FAN05G0827 Fragaria x ananassa HOM05D000100 ORTHO05D004702 1.1e-06 57.4 111 37.8
QL03p070943 Quercus lobata HOM05D000100 ORTHO05D004702 1.1e-06 57.4 67 49.3
Rhsim08G0073000 Rhododendron simsii HOM05D000100 ORTHO05D004702 1.1e-06 57.4 115 39.1
FvH4_6g47620 Fragaria vesca HOM05D000100 ORTHO05D004702 1.5e-06 57.0 111 37.8
CANSAT64G1162 Cannabis sativa HOM05D000100 ORTHO05D004702 2.5e-06 56.2 85 43.5
MBI16_g15565_MAGBIO Magnolia biondii HOM05D000100 ORTHO05D004702 2.5e-06 56.2 104 43.3
PSO528G0286 Papaver somniferum HOM05D000100 ORTHO05D004702 2.5e-06 56.2 81 40.7
Thecc.04G090100 Theobroma cacao HOM05D000100 ORTHO05D004702 3.2e-06 55.8 159 32.7
Sabra04G0066800 Salix brachista HOM05D000100 ORTHO05D004702 5.5e-06 55.1 86 39.5
Migut.H00661 Erythranthe guttata HOM05D000100 ORTHO05D004702 7.2e-06 54.7 101 36.6
Sabra17G0078700 Salix brachista HOM05D000100 ORTHO05D004702 7.2e-06 54.7 115 35.7
DCAR_025404 Daucus carota HOM05D000100 ORTHO05D004702 9.4e-06 54.3 110 38.2
Phvul.004G138450 Phaseolus vulgaris HOM05D000100 ORTHO05D004702 9.4e-06 54.3 164 34.8
Potri.017G089000 Populus trichocarpa HOM05D000100 ORTHO05D004702 9.4e-06 54.3 115 34.8


User provided reference genes

Program Settings