Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_19844 Corylus avellana HOM05D027064 ORTHO05D009743 4.0e-254 880.9 442 100.0
Cfa016866 Carpinus fangiana HOM05D027064 ORTHO05D009743 2.6e-104 383.3 325 68.0
Cfa016865 Carpinus fangiana HOM05D027064 ORTHO05D009743 4.4e-88 329.3 264 67.8
Haze_19846 Corylus avellana HOM05D027064 ORTHO05D009743 2.2e-87 327.0 230 73.0
Haze_19712 Corylus avellana HOM05D008391 ORTHO05D009743 2.6e-48 197.2 445 33.9
Haze_19278 Corylus avellana HOM05D008391 ORTHO05D009743 3.7e-42 176.8 376 33.5
Cfa014784 Carpinus fangiana HOM05D008391 ORTHO05D009743 9.1e-41 172.2 363 35.0
Haze_19708 Corylus avellana HOM05D008391 ORTHO05D009743 1.3e-39 168.3 344 35.2
Haze_19261 Corylus avellana HOM05D008391 ORTHO05D009743 2.9e-39 167.2 359 33.1
Haze_19280 Corylus avellana HOM05D008391 ORTHO05D009743 1.4e-36 158.3 432 31.5
Haze_19842 Corylus avellana HOM05D008391 ORTHO05D009743 9.1e-33 145.6 335 34.0
Haze_19938 Corylus avellana HOM05D008391 ORTHO05D009743 7.7e-32 142.5 402 30.3
Haze_02263 Corylus avellana HOM05D008391 ORTHO05D009743 1.3e-31 141.7 403 31.5
Haze_02253 Corylus avellana HOM05D001291 ORTHO05D009743 5.0e-31 139.8 403 31.3
Cfa014727 Carpinus fangiana HOM05D008391 ORTHO05D009743 6.5e-31 139.4 358 31.0
Cfa003300 Carpinus fangiana HOM05D008391 ORTHO05D009743 8.5e-31 139.0 390 29.7
Haze_19937 Corylus avellana HOM05D008391 ORTHO05D009743 1.8e-28 131.3 353 31.2
Haze_14137 Corylus avellana HOM05D008391 ORTHO05D009743 3.4e-27 127.1 331 30.8
Cfa012986 Carpinus fangiana HOM05D008391 ORTHO05D009743 1.3e-26 125.2 376 31.1
Cfa017604 Carpinus fangiana HOM05D005933 ORTHO05D007366 1.4e-25 121.7 326 30.4
Haze_14914 Corylus avellana HOM05D008391 ORTHO05D009743 1.4e-25 121.7 399 28.3
Haze_02265 Corylus avellana HOM05D008391 ORTHO05D009743 2.0e-24 117.9 387 29.5
Haze_19703 Corylus avellana HOM05D008391 ORTHO05D009743 2.7e-24 117.5 203 37.4
Haze_02255 Corylus avellana HOM05D008391 ORTHO05D009743 1.0e-23 115.5 387 29.5
Cfa017751 Carpinus fangiana HOM05D008391 ORTHO05D009743 2.2e-23 114.4 324 28.7
Haze_14978 Corylus avellana HOM05D008391 ORTHO05D009743 1.5e-22 111.7 340 30.9
Haze_02251 Corylus avellana HOM05D000722 ORTHO05D000590 5.5e-22 109.8 290 31.0
Cfa016864 Carpinus fangiana HOM05D008391 ORTHO05D009743 9.4e-22 109.0 217 37.3
Cfa016887 Carpinus fangiana HOM05D008391 ORTHO05D009743 4.7e-21 106.7 291 31.3
Cfa003685 Carpinus fangiana HOM05D008391 ORTHO05D009743 1.0e-20 105.5 404 27.0
Haze_21168 Corylus avellana HOM05D008391 ORTHO05D009743 2.3e-20 104.4 401 25.9
Haze_19940 Corylus avellana HOM05D008391 ORTHO05D009743 2.0e-19 101.3 361 28.0
Haze_02259 Corylus avellana HOM05D000722 ORTHO05D000590 2.8e-18 97.4 307 30.0
Cfa007250 Carpinus fangiana HOM05D008391 ORTHO05D009743 6.3e-18 96.3 380 25.8
Cfa016660 Carpinus fangiana HOM05D008391 ORTHO05D009743 7.0e-17 92.8 194 34.5
Cfa007291 Carpinus fangiana HOM05D008391 ORTHO05D009743 2.0e-16 91.3 368 27.2
Cfa019001 Carpinus fangiana HOM05D008391 ORTHO05D009743 4.5e-16 90.1 353 25.8
Cfa003918 Carpinus fangiana HOM05D008391 ORTHO05D009743 1.7e-15 88.2 352 27.6
Cfa017030 Carpinus fangiana HOM05D008391 ORTHO05D009743 8.6e-15 85.9 352 26.1
Cfa015317 Carpinus fangiana HOM05D008391 ORTHO05D009743 1.5e-14 85.1 316 27.2
Cfa005103 Carpinus fangiana HOM05D008391 ORTHO05D009743 1.8e-12 78.2 273 26.7
Cfa007293 Carpinus fangiana HOM05D008391 ORTHO05D009743 1.8e-12 78.2 383 25.3
Haze_15512 Corylus avellana HOM05D000163 ORTHO05D000962 3.0e-12 77.4 333 29.1
Cfa003917 Carpinus fangiana HOM05D008391 ORTHO05D009743 5.2e-12 76.6 287 27.5
Cfa016862 Carpinus fangiana HOM05D008391 ORTHO05D009743 6.8e-12 76.3 211 30.3
Dinv34884 Davidia involucrata HOM05D010628 ORTHO05D010877 8.9e-12 75.9 195 30.3
QL11p026821 Quercus lobata HOM05D061260 ORTHO05D009743 1.3e-10 72.0 358 22.6
QL11p026859 Quercus lobata HOM05D061260 ORTHO05D009743 3.7e-10 70.5 309 21.7
RhsimUnG0033800 Rhododendron simsii HOM05D010628 ORTHO05D010877 3.7e-10 70.5 204 28.4
Cfa002005 Carpinus fangiana HOM05D003991 ORTHO05D009743 8.3e-10 69.3 351 21.9
Rhsim12G0126200 Rhododendron simsii HOM05D010628 ORTHO05D010877 8.3e-10 69.3 226 26.5
RhsimUnG0034600 Rhododendron simsii HOM05D010628 ORTHO05D010877 1.1e-09 68.9 204 27.9
RhsimUnG0034700 Rhododendron simsii HOM05D010628 ORTHO05D010877 1.1e-09 68.9 204 27.9
RhsimUnG0034800 Rhododendron simsii HOM05D010628 ORTHO05D010877 1.1e-09 68.9 204 27.9
Aqoxy2G03423 Aquilegia oxysepala HOM05D011324 ORTHO05D013448 1.4e-09 68.6 191 29.3
Rhsim07G0232100 Rhododendron simsii HOM05D010628 ORTHO05D010877 2.4e-09 67.8 204 27.0
RhsimUnG0034500 Rhododendron simsii HOM05D010628 ORTHO05D010877 2.4e-09 67.8 204 27.9
vmacro21156 Vaccinium macrocarpon HOM05D004925 ORTHO05D005643 4.1e-09 67.0 302 24.2
RhsimUnG0034900 Rhododendron simsii HOM05D010628 ORTHO05D010877 5.4e-09 66.6 204 27.5
Cfa003301 Carpinus fangiana HOM05D008391 ORTHO05D009743 9.2e-09 65.9 318 23.3
CSS0026782 Camellia sinensis var. sinensis HOM05D025100 ORTHO05D013046 2.0e-08 64.7 323 25.7
Haze_14975 Corylus avellana HOM05D008391 ORTHO05D009743 7.8e-08 62.8 167 32.9
CiPaw.03G134300 Carya illinoinensis HOM05D000249 ORTHO05D000206 1.3e-07 62.0 141 31.2
AL4G22950 Arabidopsis lyrata HOM05D000249 ORTHO05D000206 3.0e-07 60.8 162 28.4
CSS0029553 Camellia sinensis var. sinensis HOM05D013111 ORTHO05D013046 3.0e-07 60.8 300 25.7
CANSAT01G1486 Cannabis sativa HOM05D000249 ORTHO05D000206 8.6e-07 59.3 141 32.6
QL11p056498 Quercus lobata HOM05D010066 ORTHO05D009743 1.1e-06 58.9 224 26.3
BraA04t17290Z Brassica rapa HOM05D000249 ORTHO05D000206 1.5e-06 58.5 104 39.4
Dinv35654 Davidia involucrata HOM05D013363 ORTHO05D015094 1.5e-06 58.5 322 22.7
A04p16540 Brassica napus HOM05D000249 ORTHO05D000206 1.9e-06 58.2 104 38.5
QL09p047090 Quercus lobata HOM05D041046 ORTHO05D021181 1.9e-06 58.2 260 23.5
Carub.0003s0535 Capsella rubella HOM05D000249 ORTHO05D014429 2.5e-06 57.8 132 31.1
Cfa016758 Carpinus fangiana HOM05D008391 ORTHO05D009743 2.5e-06 57.8 136 35.3
C07p01540 Brassica napus HOM05D000249 ORTHO05D000206 4.3e-06 57.0 165 32.1
Dinv35658 Davidia involucrata HOM05D013363 ORTHO05D015094 4.3e-06 57.0 156 27.6
PGR004G0795 Punica granatum HOM05D000249 ORTHO05D000206 4.3e-06 57.0 114 34.2
C07p12660 Brassica napus HOM05D000249 ORTHO05D000206 5.6e-06 56.6 247 26.3
AT5G02995 Arabidopsis thaliana HOM05D000249 ORTHO05D000206 7.3e-06 56.2 154 26.6
CSS0012725 Camellia sinensis var. sinensis HOM05D025100 ORTHO05D013046 7.3e-06 56.2 340 23.5
Dinv35477 Davidia involucrata HOM05D013363 ORTHO05D015094 7.3e-06 56.2 305 21.6
Nitab4.5_0000807g0200 Nicotiana tabacum HOM05D003852 ORTHO05D003095 7.3e-06 56.2 155 31.0
C04p51070 Brassica napus HOM05D000249 ORTHO05D000206 9.5e-06 55.8 104 38.5
BolC4t26700H Brassica oleracea HOM05D000249 ORTHO05D000206 9.5e-06 55.8 104 38.5
Dinv35632 Davidia involucrata HOM05D013363 ORTHO05D015094 9.5e-06 55.8 164 26.8


User provided reference genes

Program Settings