Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_19831 Corylus avellana HOM05D000042 ORTHO05D000028 8.7e-64 246.9 132 100.0
Haze_19826 Corylus avellana HOM05D000042 ORTHO05D000028 1.6e-62 242.7 132 98.5
Cfa016796 Carpinus fangiana HOM05D000042 ORTHO05D000028 3.8e-51 204.9 186 67.2
QL07p001582 Quercus lobata HOM05D000042 ORTHO05D000028 5.5e-34 147.9 200 47.5
CiPaw.09G039300 Carya illinoinensis HOM05D000042 ORTHO05D000028 4.5e-28 128.3 137 61.3
Ciclev10005698m.g Citrus clementina HOM05D000042 ORTHO05D000028 7.9e-25 117.5 109 63.3
MD00G1106300 Malus domestica HOM05D000042 ORTHO05D000028 3.9e-24 115.2 109 63.3
Atru.chr1.1136 Acer truncatum HOM05D000042 ORTHO05D000028 6.7e-24 114.4 106 67.0
Potri.006G048700 Populus trichocarpa HOM05D000042 ORTHO05D000028 9.7e-23 110.5 188 41.0
Sabra06G0034000 Salix brachista HOM05D000042 ORTHO05D000028 4.8e-22 108.2 131 51.9
Duzib093G0336 Durio zibethinus HOM05D000042 ORTHO05D000028 8.2e-22 107.5 134 53.0
Phvul.007G251600 Phaseolus vulgaris HOM05D000042 ORTHO05D000028 1.5e-20 103.2 130 52.3
Glyma.02G185500 Glycine max HOM05D000042 ORTHO05D000028 5.9e-20 101.3 187 41.2
Manes.09G019300 Manihot esculenta HOM05D000042 ORTHO05D000028 7.7e-20 100.9 194 40.7
Duzib106G1526 Durio zibethinus HOM05D000042 ORTHO05D000028 1.0e-19 100.5 135 51.1
Ca_27021_v3 Cicer arietinum L. HOM05D000042 ORTHO05D000028 8.5e-19 97.4 107 60.7
VMungo0720G3184 Vigna mungo HOM05D000042 ORTHO05D000028 7.2e-18 94.4 131 51.1
Lalb_Chr21g0316521 Lupinus albus HOM05D000042 ORTHO05D000028 9.4e-18 94.0 186 40.3
TWI77G0779 Tripterygium wilfordii HOM05D000042 ORTHO05D000028 1.2e-17 93.6 107 56.1
Medtr1g053070 Medicago truncatula HOM05D000042 ORTHO05D000028 2.6e-15 85.9 121 51.2
Psat6g113320 Pisum sativum HOM05D000042 ORTHO05D000028 2.6e-15 85.9 121 50.4
Thecc.05G150100 Theobroma cacao HOM05D000042 ORTHO05D000028 6.3e-14 81.3 134 44.8
Duzib128G0515 Durio zibethinus HOM05D000042 ORTHO05D000028 7.0e-13 77.8 106 50.0
TAR633G2262 Trochodendron aralioides HOM05D000042 ORTHO05D000028 2.6e-12 75.9 116 45.7
Gorai.007G360800 Gossypium raimondii HOM05D000042 ORTHO05D000028 4.5e-12 75.1 198 34.8
Cfa010822 Carpinus fangiana HOM05D000042 ORTHO05D000028 6.5e-11 71.2 136 39.0
Manes.07G011600 Manihot esculenta HOM05D000042 ORTHO05D000028 6.5e-11 71.2 114 43.9
Prupe.7G055900 Prunus persica HOM05D000042 ORTHO05D000028 6.5e-11 71.2 108 53.7
Gohir.D11G329600 Gossypium hirsutum HOM05D000042 ORTHO05D000028 8.5e-11 70.9 198 34.8
Lj5g0007892 Lotus japonicus HOM05D000042 ORTHO05D000028 1.1e-10 70.5 159 35.2
PGR004G1335 Punica granatum HOM05D000042 ORTHO05D000028 1.9e-10 69.7 109 45.0
FAN01G3037 Fragaria x ananassa HOM05D000042 ORTHO05D000028 2.5e-10 69.3 112 42.9
Dinv39623 Davidia involucrata HOM05D000042 ORTHO05D000028 3.2e-10 68.9 131 42.0
CANSAT80G1550 Cannabis sativa HOM05D000042 ORTHO05D000028 5.5e-10 68.2 138 38.4
CSS0023376 Camellia sinensis var. sinensis HOM05D000042 ORTHO05D000028 7.2e-10 67.8 108 48.1
Lj3g0001475 Lotus japonicus HOM05D000042 ORTHO05D000028 7.2e-10 67.8 129 40.3
Aqoxy1G00318 Aquilegia oxysepala HOM05D000042 ORTHO05D000028 1.2e-09 67.0 139 36.7
DCAR_020500 Daucus carota HOM05D000042 ORTHO05D000028 2.1e-09 66.2 91 50.5
Nn7g36342 Nelumbo nucifera HOM05D000042 ORTHO05D000028 3.6e-09 65.5 114 42.1
CSS0039724 Camellia sinensis var. sinensis HOM05D000042 ORTHO05D000028 4.7e-09 65.1 177 35.0
Ciclev10032519m.g Citrus clementina HOM05D000042 ORTHO05D000028 4.7e-09 65.1 112 40.2
Cc06_g17700 Coffea canephora HOM05D000042 ORTHO05D000028 4.7e-09 65.1 123 45.5
MBI17_g18123_MAGBIO Magnolia biondii HOM05D000042 ORTHO05D000028 6.1e-09 64.7 135 40.7
Lalb_Chr19g0140231 Lupinus albus HOM05D000042 ORTHO05D000028 1.4e-08 63.5 131 37.4
TPR.G8340 Trifolium pratense HOM05D000042 ORTHO05D000028 1.4e-08 63.5 110 42.7
MD02G1301400 Malus domestica HOM05D000042 ORTHO05D000028 2.3e-08 62.8 108 42.6
Medtr0003s0590 Medicago truncatula HOM05D000042 ORTHO05D000028 2.3e-08 62.8 125 38.4
arahy.Tifrunner.gnm1.ann1.BJW67H Arachis hypogaea HOM05D000042 ORTHO05D000028 3.0e-08 62.4 140 39.3
arahy.Tifrunner.gnm1.ann1.XIQ273 Arachis hypogaea HOM05D000042 ORTHO05D000028 3.0e-08 62.4 148 37.2
Lju124C44T12 Lonicera japonica HOM05D000042 ORTHO05D000028 3.0e-08 62.4 135 40.7
Cfa016798 Carpinus fangiana HOM05D000042 ORTHO05D000028 4.0e-08 62.0 113 43.4
Ca_26441_v3 Cicer arietinum L. HOM05D000042 ORTHO05D000028 4.0e-08 62.0 125 38.4
Eucgr.G03284 Eucalyptus grandis HOM05D000042 ORTHO05D000028 4.0e-08 62.0 136 39.0
Prupe.2G023100 Prunus persica HOM05D000042 ORTHO05D000028 4.0e-08 62.0 104 46.2
THA.LOC104824433 Tarenaya hassleriana HOM05D000042 ORTHO05D000028 4.0e-08 62.0 112 42.0
Atru.chr11.2528 Acer truncatum HOM05D000042 ORTHO05D000028 6.7e-08 61.2 128 39.8
FAN03G2904 Fragaria x ananassa HOM05D000042 ORTHO05D000028 6.7e-08 61.2 105 41.9
TWI53G0011 Tripterygium wilfordii HOM05D000042 ORTHO05D000028 6.7e-08 61.2 184 33.2
MD07G1022500 Malus domestica HOM05D000042 ORTHO05D000028 8.8e-08 60.8 137 39.4
QL04p010447 Quercus lobata HOM05D000042 ORTHO05D000028 1.2e-07 60.5 135 37.0
FAN06G4485 Fragaria x ananassa HOM05D000042 ORTHO05D000028 1.5e-07 60.1 105 41.0
THA.LOC104817587 Tarenaya hassleriana HOM05D000042 ORTHO05D000028 1.5e-07 60.1 132 38.6
RcHm_v2.0_Chr1g0318281 Rosa chinensis HOM05D000042 ORTHO05D000028 3.3e-07 58.9 105 41.9
C08p32790 Brassica napus HOM05D000042 ORTHO05D000028 4.4e-07 58.5 109 42.2
BolC8t50890H Brassica oleracea HOM05D000042 ORTHO05D000028 4.4e-07 58.5 109 42.2
Lalb_Chr01g0000501 Lupinus albus HOM05D000042 ORTHO05D000028 4.4e-07 58.5 142 37.3
FvH4_7g01720 Fragaria vesca HOM05D000042 ORTHO05D000028 5.7e-07 58.2 103 40.8
Aa31LG10G12220 Aethionema arabicum HOM05D000042 ORTHO05D000028 7.5e-07 57.8 121 39.7
Cpa.g.c37200 Carica papaya HOM05D000042 ORTHO05D000028 7.5e-07 57.8 90 50.0
CsaV3_3G031900 Cucumis sativus L. HOM05D000042 ORTHO05D000028 9.7e-07 57.4 110 39.1
CsaV3_4G028880 Cucumis sativus L. HOM05D000042 ORTHO05D000028 9.7e-07 57.4 111 37.8
Gorai.008G112400 Gossypium raimondii HOM05D000042 ORTHO05D000028 1.7e-06 56.6 108 39.8
PSO384G4921 Papaver somniferum HOM05D000042 ORTHO05D000028 1.7e-06 56.6 135 36.3
EL10Ac2g04380 Beta vulgaris HOM05D000042 ORTHO05D000028 2.2e-06 56.2 137 36.5
GSVIVG01001437001 Vitis vinifera HOM05D000042 ORTHO05D000028 2.8e-06 55.8 93 43.0
MSTRG.6418 Avicennia marina HOM05D000042 ORTHO05D000028 3.7e-06 55.5 96 43.8
PSO339G2047 Papaver somniferum HOM05D000042 ORTHO05D000028 3.7e-06 55.5 135 35.6
BraA04t16037Z Brassica rapa HOM05D000042 ORTHO05D000028 4.8e-06 55.1 134 40.3
Gohir.A12G100400 Gossypium hirsutum HOM05D000042 ORTHO05D000028 4.8e-06 55.1 107 39.3
Gohir.D12G103400 Gossypium hirsutum HOM05D000042 ORTHO05D000028 4.8e-06 55.1 107 39.3
AT3G57390 Arabidopsis thaliana HOM05D000042 ORTHO05D000028 6.3e-06 54.7 128 38.3
A04p03160 Brassica napus HOM05D000042 ORTHO05D000028 8.2e-06 54.3 114 40.4


User provided reference genes

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