Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_19805 Corylus avellana HOM05D007435 ORTHO05D009338 7.2e-44 180.3 96 100.0
Haze_03106 Corylus avellana HOM05D007435 ORTHO05D009338 2.0e-38 162.2 89 96.6
Cfa010840 Carpinus fangiana HOM05D007435 ORTHO05D009338 4.3e-36 154.5 89 92.1
CiPaw.13G009600 Carya illinoinensis HOM05D007435 ORTHO05D009338 1.5e-25 119.4 92 73.9
QL04p012434 Quercus lobata HOM05D007435 ORTHO05D009338 3.0e-21 105.1 89 66.3
QL04p013057 Quercus lobata HOM05D007435 ORTHO05D009338 4.7e-19 97.8 89 62.9
TAR065G0004 Trochodendron aralioides HOM05D007435 ORTHO05D009338 1.4e-18 96.3 92 58.7
Prupe.2G027100 Prunus persica HOM05D007435 ORTHO05D009338 6.8e-18 94.0 92 55.4
TWI63G0886 Tripterygium wilfordii HOM05D007435 ORTHO05D009338 7.6e-17 90.5 90 57.8
RcHm_v2.0_Chr1g0319401 Rosa chinensis HOM05D007435 ORTHO05D009338 1.4e-15 86.3 89 58.4
MD02G1297000 Malus domestica HOM05D007435 ORTHO05D009338 1.9e-15 85.9 94 54.3
MD07G1027000 Malus domestica HOM05D007435 ORTHO05D009338 3.2e-15 85.1 94 54.3
TAR369G0027 Trochodendron aralioides HOM05D007435 ORTHO05D009338 3.2e-15 85.1 92 55.4
Potri.001G022500 Populus trichocarpa HOM05D007435 ORTHO05D009338 1.2e-14 83.2 68 64.7
FvH4_7g02100 Fragaria vesca HOM05D007435 ORTHO05D009338 2.1e-14 82.4 97 52.6
Duzib114G0226 Durio zibethinus HOM05D007435 ORTHO05D009338 7.8e-14 80.5 96 52.1
Hma1.2p1_0269F.1_g107800 Hydrangea macrophylla HOM05D007435 ORTHO05D009338 7.8e-14 80.5 81 56.8
Sabra01G0016900 Salix brachista HOM05D007435 ORTHO05D009338 2.3e-13 79.0 69 63.8
FAN03G1772 Fragaria x ananassa HOM05D007435 ORTHO05D009338 3.0e-13 78.6 96 52.1
Hund13323 Selenicereus undatus HOM05D000185 ORTHO05D000105 2.5e-12 75.5 59 64.4
Manes.11G002100 Manihot esculenta HOM05D007435 ORTHO05D009338 9.6e-12 73.6 89 51.7
COL.COLO4_19345 Corchorus olitorius HOM05D007435 ORTHO05D009338 1.2e-11 73.2 94 52.1
Atru.chr11.2511 Acer truncatum HOM05D007435 ORTHO05D009338 1.6e-11 72.8 94 52.1
Cpa.g.sc197.17 Carica papaya HOM05D007435 ORTHO05D009338 1.6e-11 72.8 94 53.2
AUR62026808 Chenopodium quinoa HOM05D007435 ORTHO05D009338 3.6e-11 71.6 72 51.4
CANSAT80G0490 Cannabis sativa HOM05D007435 ORTHO05D009338 1.4e-10 69.7 93 48.4
unitig_578.g16053 Utricularia gibba HOM05D007435 ORTHO05D009338 5.2e-10 67.8 73 54.8
Duzib128G0703 Durio zibethinus HOM05D007435 ORTHO05D009338 6.8e-10 67.4 96 49.0
AUR62037244 Chenopodium quinoa HOM05D007435 ORTHO05D009338 1.2e-09 66.6 92 44.6
Dinv03572 Davidia involucrata HOM05D007435 ORTHO05D009338 1.2e-09 66.6 50 64.0
Dinv05039 Davidia involucrata HOM05D007435 ORTHO05D009338 1.2e-09 66.6 50 64.0
Thecc.10G004500 Theobroma cacao HOM05D007435 ORTHO05D009338 1.5e-09 66.2 98 45.9
Rhsim05G0126700 Rhododendron simsii HOM05D007435 ORTHO05D009338 2.0e-09 65.9 94 47.9
vmacro19756 Vaccinium macrocarpon HOM05D007435 ORTHO05D009338 2.0e-09 65.9 92 45.7
Actinidia21528 Actinidia chinensis HOM05D007435 ORTHO05D009338 2.6e-09 65.5 76 51.3
Dinv32059 Davidia involucrata HOM05D007435 ORTHO05D009338 2.6e-09 65.5 93 47.3
CSS0019859 Camellia sinensis var. sinensis HOM05D007435 ORTHO05D009338 9.9e-09 63.5 77 49.4
Eucgr.G03266 Eucalyptus grandis HOM05D007435 ORTHO05D009338 9.9e-09 63.5 86 47.7
Actinidia02252 Actinidia chinensis HOM05D007435 ORTHO05D009338 1.3e-08 63.2 93 46.2
Lalb_Chr25g0282731 Lupinus albus HOM05D007435 ORTHO05D009338 2.9e-08 62.0 93 51.6
Sc10g0004150 Simmondsia chinensis HOM05D007435 ORTHO05D009338 2.9e-08 62.0 94 44.7
Nn7g36439 Nelumbo nucifera HOM05D007435 ORTHO05D009338 4.9e-08 61.2 94 47.9
PGR031G0502 Punica granatum HOM05D007435 ORTHO05D009338 1.1e-07 60.1 79 48.1
Sed0015818 Sechium edule HOM05D007435 ORTHO05D009338 1.1e-07 60.1 77 48.1
ClCG01G007560 Citrullus lanatus HOM05D007435 ORTHO05D009338 1.4e-07 59.7 92 42.4
Lj3g0014273 Lotus japonicus HOM05D007435 ORTHO05D009338 1.4e-07 59.7 90 43.3
SalBow6G1324 Salvia bowleyana HOM05D007435 ORTHO05D009338 1.4e-07 59.7 65 50.8
SGA_v2.0_scaffold354G49740 Striga asiatica HOM05D007435 ORTHO05D009338 2.4e-07 58.9 72 51.4
AL343U10010 Arabidopsis lyrata HOM05D007435 ORTHO05D009338 3.2e-07 58.5 73 46.6
Carub.0007s0901 Capsella rubella HOM05D007435 ORTHO05D009338 3.2e-07 58.5 70 48.6
Ah.10g030920 Amaranthus hybridus HOM05D007435 ORTHO05D009338 4.2e-07 58.2 66 45.5
Migut.N01821 Erythranthe guttata HOM05D007435 ORTHO05D009338 5.4e-07 57.8 74 44.6
THA.LOC104826709 Tarenaya hassleriana HOM05D007435 ORTHO05D009338 7.1e-07 57.4 86 45.3
AT4G31560 Arabidopsis thaliana HOM05D007435 ORTHO05D009338 9.3e-07 57.0 88 45.5
Ciclev10032994m.g Citrus clementina HOM05D007435 ORTHO05D009338 9.3e-07 57.0 52 57.7
MELO3C005141.2 Cucumis melo HOM05D007435 ORTHO05D009338 9.3e-07 57.0 92 42.4
CsaV3_5G024570 Cucumis sativus L. HOM05D007435 ORTHO05D009338 9.3e-07 57.0 92 40.2
Aa31LG2G18760 Aethionema arabicum HOM05D007435 ORTHO05D009338 2.7e-06 55.5 48 54.2
A01p06670 Brassica napus HOM05D005366 ORTHO05D006323 2.7e-06 55.5 65 49.2
A03p60860 Brassica napus HOM05D007435 ORTHO05D009338 2.7e-06 55.5 98 41.8
BraA01t00625Z Brassica rapa HOM05D005366 ORTHO05D006323 2.7e-06 55.5 65 49.2
BraA03t15122Z Brassica rapa HOM05D007435 ORTHO05D009338 2.7e-06 55.5 98 41.8
Ca_27018_v3 Cicer arietinum L. HOM05D007435 ORTHO05D009338 2.7e-06 55.5 93 44.1
BcaNung04129 Brassica carinata HOM05D007435 ORTHO05D009338 3.5e-06 55.1 96 41.7
Phvul.005G033400 Phaseolus vulgaris HOM05D007435 ORTHO05D009338 3.5e-06 55.1 79 45.6
CDE08G0963 Ceratophyllum demersum HOM05D000584 ORTHO05D009338 4.6e-06 54.7 93 44.1
Glyma.11G149600 Glycine max HOM05D007435 ORTHO05D009338 4.6e-06 54.7 63 49.2
BcaNung01514 Brassica carinata HOM05D007435 ORTHO05D009338 6.0e-06 54.3 96 40.6
VMungo1080G0635 Vigna mungo HOM05D007435 ORTHO05D009338 6.0e-06 54.3 85 44.7


User provided reference genes

Program Settings