Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_19611 Corylus avellana HOM05D005696 ORTHO05D007099 3.0e-87 325.1 158 100.0
Cfa016607 Carpinus fangiana HOM05D005696 ORTHO05D007099 1.2e-80 303.1 158 92.4
CiPaw.09G014000 Carya illinoinensis HOM05D005696 ORTHO05D007099 2.3e-71 272.3 158 84.8
QL07p039009 Quercus lobata HOM05D005696 ORTHO05D007099 9.1e-68 260.4 149 82.6
Thecc.05G089100 Theobroma cacao HOM05D005696 ORTHO05D007099 3.4e-67 258.5 150 81.3
QL07p038757 Quercus lobata HOM05D005696 ORTHO05D007099 5.9e-67 257.7 157 78.3
PGR142G1689 Punica granatum HOM05D005696 ORTHO05D007099 7.7e-67 257.3 158 75.9
Cc03_g11090 Coffea canephora HOM05D005696 ORTHO05D007099 1.0e-66 256.9 157 75.8
arahy.Tifrunner.gnm1.ann1.NXU1NB Arachis hypogaea HOM05D005696 ORTHO05D007099 2.2e-66 255.8 150 83.3
Sabra18G0074700 Salix brachista HOM05D005696 ORTHO05D007099 2.2e-66 255.8 149 82.6
COL.COLO4_29734 Corchorus olitorius HOM05D005696 ORTHO05D007099 2.9e-66 255.4 158 77.8
Manes.08G025300 Manihot esculenta HOM05D005696 ORTHO05D007099 1.9e-65 252.7 149 82.6
Potri.018G086400 Populus trichocarpa HOM05D005696 ORTHO05D007099 2.5e-65 252.3 149 82.6
Dinv21209 Davidia involucrata HOM05D005696 ORTHO05D007099 3.2e-65 251.9 158 76.6
GSVIVG01033843001 Vitis vinifera HOM05D005696 ORTHO05D007099 4.2e-65 251.5 158 77.2
Rhsim03G0075100 Rhododendron simsii HOM05D005696 ORTHO05D007099 5.5e-65 251.1 146 80.8
TWI53G1247 Tripterygium wilfordii HOM05D005696 ORTHO05D007099 7.2e-65 250.8 152 77.0
CANSAT80G0528 Cannabis sativa HOM05D005696 ORTHO05D007099 9.4e-65 250.4 158 75.9
Atru.chr8.1538 Acer truncatum HOM05D005696 ORTHO05D007099 1.6e-64 249.6 158 77.2
Ca_09006_v3 Cicer arietinum L. HOM05D005696 ORTHO05D007099 1.6e-64 249.6 150 80.0
MD06G1040400 Malus domestica HOM05D005696 ORTHO05D007099 1.6e-64 249.6 150 81.3
Duzib106G0894 Durio zibethinus HOM05D005696 ORTHO05D007099 2.1e-64 249.2 158 76.6
CsaV3_3G037280 Cucumis sativus L. HOM05D005696 ORTHO05D007099 4.7e-64 248.1 156 74.4
DCAR_013385 Daucus carota HOM05D005696 ORTHO05D007099 4.7e-64 248.1 150 77.3
TPR.G22495 Trifolium pratense HOM05D005696 ORTHO05D007099 4.7e-64 248.1 150 79.3
CSS0033781 Camellia sinensis var. sinensis HOM05D005696 ORTHO05D007099 6.1e-64 247.7 149 77.9
Medtr7g104610 Medicago truncatula HOM05D005696 ORTHO05D007099 1.4e-63 246.5 150 78.0
Gorai.002G158300 Gossypium raimondii HOM05D005696 ORTHO05D007099 1.8e-63 246.1 158 75.9
Hma1.2p1_0084F.1_g043820 Hydrangea macrophylla HOM05D005696 ORTHO05D007099 1.8e-63 246.1 158 73.4
Hma1.2p1_0820F.1_g223835 Hydrangea macrophylla HOM05D005696 ORTHO05D007099 1.8e-63 246.1 158 73.4
Rhsim03G0187900 Rhododendron simsii HOM05D005696 ORTHO05D007099 1.8e-63 246.1 147 78.2
TPR.G19517 Trifolium pratense HOM05D005696 ORTHO05D007099 1.8e-63 246.1 150 79.3
TWI77G0870 Tripterygium wilfordii HOM05D005696 ORTHO05D007099 3.0e-63 245.4 152 77.0
Sc02g0000250 Simmondsia chinensis HOM05D005696 ORTHO05D007099 5.1e-63 244.6 150 77.3
ClCG10G018970 Citrullus lanatus HOM05D005696 ORTHO05D007099 6.7e-63 244.2 156 75.6
Sed0022063 Sechium edule HOM05D005696 ORTHO05D007099 8.8e-63 243.8 156 71.8
Ah.01g020980 Amaranthus hybridus HOM05D005696 ORTHO05D007099 1.1e-62 243.4 147 76.9
Eucgr.K02040 Eucalyptus grandis HOM05D005696 ORTHO05D007099 1.1e-62 243.4 146 80.1
Gohir.D01G127700 Gossypium hirsutum HOM05D005696 ORTHO05D007099 1.1e-62 243.4 158 75.3
AUR62028517 Chenopodium quinoa HOM05D005696 ORTHO05D007099 2.6e-62 242.3 148 75.7
MELO3C009473.2 Cucumis melo HOM05D005696 ORTHO05D007099 2.6e-62 242.3 156 73.7
MD14G1023000 Malus domestica HOM05D005696 ORTHO05D007099 2.6e-62 242.3 150 78.0
Ciclev10012817m.g Citrus clementina HOM05D005696 ORTHO05D007099 4.4e-62 241.5 158 74.1
Gohir.A01G138000 Gossypium hirsutum HOM05D005696 ORTHO05D007099 9.7e-62 240.4 158 74.1
Lj2P137T17 Lonicera japonica HOM05D005696 ORTHO05D007099 9.7e-62 240.4 150 77.3
Lj2P1003T8 Lonicera japonica HOM05D005696 ORTHO05D007099 1.3e-61 240.0 150 76.0
ECA240G0707 Erigeron canadensis HOM05D005696 ORTHO05D007099 2.2e-61 239.2 158 72.8
Lalb_Chr01g0018151 Lupinus albus HOM05D005696 ORTHO05D007099 2.2e-61 239.2 144 79.2
Glyma.03G195900 Glycine max HOM05D005696 ORTHO05D007099 2.8e-61 238.8 150 76.0
RcHm_v2.0_Chr3g0473671 Rosa chinensis HOM05D005696 ORTHO05D007099 3.7e-61 238.4 150 76.0
FvH4_6g18700 Fragaria vesca HOM05D005696 ORTHO05D007099 4.8e-61 238.0 150 76.0
MSTRG.19260 Avicennia marina HOM05D005696 ORTHO05D007099 6.3e-61 237.7 158 69.0
Lsat_1_v5_gn_7_37701 Lactuca sativa HOM05D005696 ORTHO05D007099 8.2e-61 237.3 158 71.5
VMungo1383G2828 Vigna mungo HOM05D005696 ORTHO05D007099 1.1e-60 236.9 149 76.5
Glyma.19G194929 Glycine max HOM05D005696 ORTHO05D007099 1.8e-60 236.1 148 75.0
FAN14G5868 Fragaria x ananassa HOM05D005696 ORTHO05D007099 2.4e-60 235.7 150 75.3
Psat3g033280 Pisum sativum HOM05D005696 ORTHO05D007099 2.4e-60 235.7 148 73.6
Sed0001709 Sechium edule HOM05D005696 ORTHO05D007099 2.4e-60 235.7 156 69.2
FAN05G4755 Fragaria x ananassa HOM05D005696 ORTHO05D007099 3.1e-60 235.3 150 75.3
TPR.G30027 Trifolium pratense HOM05D005696 ORTHO05D007099 3.1e-60 235.3 150 74.0
Nn2g14158 Nelumbo nucifera HOM05D005696 ORTHO05D007099 5.3e-60 234.6 148 76.4
Nitab4.5_0000794g0110 Nicotiana tabacum HOM05D005696 ORTHO05D007099 5.3e-60 234.6 150 72.7
Oeu017678.1 Olea europaea HOM05D005696 ORTHO05D007099 9.1e-60 233.8 158 69.6
Oeu017679.1 Olea europaea HOM05D005696 ORTHO05D007099 9.1e-60 233.8 158 69.6
SGA_v2.0_scaffold75G24749 Striga asiatica HOM05D005696 ORTHO05D007099 1.6e-59 233.0 151 70.2
EL10Ac7g16916 Beta vulgaris HOM05D005696 ORTHO05D007099 2.0e-59 232.6 150 73.3
Phvul.001G189800 Phaseolus vulgaris HOM05D005696 ORTHO05D007099 2.0e-59 232.6 148 75.0
CiPaw.10G009800 Carya illinoinensis HOM05D005696 ORTHO05D007099 2.6e-59 232.3 138 82.6
SalBow3G1016 Salvia bowleyana HOM05D005696 ORTHO05D007099 2.6e-59 232.3 148 73.0
CAN.G397.49 Capsicum annuum HOM05D005696 ORTHO05D007099 3.5e-59 231.9 152 71.7
HanXRQChr03g0060731 Helianthus annuus HOM05D005696 ORTHO05D007099 5.9e-59 231.1 158 69.0
PGSC0003DMG400008956 Solanum tuberosum HOM05D005696 ORTHO05D007099 5.9e-59 231.1 149 72.5
Aqoxy1G00460 Aquilegia oxysepala HOM05D005696 ORTHO05D007099 7.7e-59 230.7 148 73.0
Prupe.7G110200 Prunus persica HOM05D005696 ORTHO05D007099 7.7e-59 230.7 144 76.4
DCAR_007752 Daucus carota HOM05D005696 ORTHO05D007099 1.0e-58 230.3 158 69.0
Cpa.g.sc5.19 Carica papaya HOM05D005696 ORTHO05D007099 1.3e-58 229.9 143 74.8
Hma1.2p1_0232F.1_g097930 Hydrangea macrophylla HOM05D005696 ORTHO05D007099 2.2e-58 229.2 149 71.8
Sopen09g004540 Solanum pennellii HOM05D005696 ORTHO05D007099 5.0e-58 228.0 149 71.8
TAR374G1347 Trochodendron aralioides HOM05D005696 ORTHO05D007099 1.1e-57 226.9 147 72.8
SalBow6G6426 Salvia bowleyana HOM05D005696 ORTHO05D007099 1.9e-57 226.1 145 71.7
Solyc09g009780.4 Solanum lycopersicum HOM05D005696 ORTHO05D007099 2.5e-57 225.7 149 71.1
unitig_744.g24697 Utricularia gibba HOM05D001616 ORTHO05D007099 4.2e-57 224.9 148 68.9
Aqoxy2G01202 Aquilegia oxysepala HOM05D005696 ORTHO05D007099 5.5e-57 224.6 148 70.9
Aa31LG5G12820 Aethionema arabicum HOM05D005696 ORTHO05D007099 1.4e-55 219.9 146 72.6
AL6G26610 Arabidopsis lyrata HOM05D005696 ORTHO05D007099 3.0e-55 218.8 146 72.6
MBI04_g14262_MAGBIO Magnolia biondii HOM05D005696 ORTHO05D007099 3.0e-55 218.8 149 69.8
AT5G15770 Arabidopsis thaliana HOM05D005696 ORTHO05D007099 5.2e-55 218.0 144 72.2
Carub.0006s1392 Capsella rubella HOM05D005696 ORTHO05D007099 5.2e-55 218.0 146 71.9
THA.LOC104820979 Tarenaya hassleriana HOM05D005696 ORTHO05D007099 6.7e-55 217.6 148 72.3
HanXRQChr07g0189921 Helianthus annuus HOM05D005696 ORTHO05D007099 3.7e-53 211.8 157 65.0
Sp6g28350 Schrenkiella parvula HOM05D005696 ORTHO05D007099 4.8e-53 211.5 148 69.6
Aa31LG11G13810 Aethionema arabicum HOM05D005696 ORTHO05D007099 6.3e-53 211.1 150 69.3
BcaNung02203 Brassica carinata HOM05D005696 ORTHO05D007099 1.1e-52 210.3 148 67.6
BolC9t58974H Brassica oleracea HOM05D005696 ORTHO05D007099 1.1e-52 210.3 148 67.6
C09p61330 Brassica napus HOM05D005696 ORTHO05D007099 1.4e-52 209.9 148 67.6
PSO339G3505 Papaver somniferum HOM05D005696 ORTHO05D007099 3.1e-52 208.8 148 66.2
Thhalv10014892m.g Eutrema salsugineum HOM05D005696 ORTHO05D007099 4.1e-52 208.4 148 67.6
A10p23260 Brassica napus HOM05D005696 ORTHO05D007099 9.1e-52 207.2 148 65.5
BraA10t44394Z Brassica rapa HOM05D005696 ORTHO05D007099 1.2e-51 206.8 148 65.5
C02p07960 Brassica napus HOM05D005696 ORTHO05D007099 2.0e-51 206.1 148 66.9
PSO384G1553 Papaver somniferum HOM05D005696 ORTHO05D007099 2.0e-51 206.1 148 64.2
CARHR197560 Cardamine hirsuta HOM05D005696 ORTHO05D007099 3.5e-51 205.3 146 67.1
SHI28289 Sapria himalayana HOM05D005696 ORTHO05D007099 3.5e-51 205.3 157 60.5
BraA02t05292Z Brassica rapa HOM05D005696 ORTHO05D007099 7.7e-51 204.1 148 64.9
A02p03210 Brassica napus HOM05D005696 ORTHO05D007099 2.2e-50 202.6 148 64.2
BcaC03g18448 Brassica carinata HOM05D005696 ORTHO05D007099 3.8e-50 201.8 148 65.5
BolC2t06719H Brassica oleracea HOM05D005696 ORTHO05D007099 3.8e-50 201.8 148 65.5
Dinv31687 Davidia involucrata HOM05D005696 ORTHO05D010438 1.1e-49 200.3 127 75.6
BcaC04g18939 Brassica carinata HOM05D005696 ORTHO05D007099 3.0e-47 192.2 148 64.2
HPP92_015765 Vanilla planifolia HOM05D005696 ORTHO05D007099 4.0e-47 191.8 142 60.6
ATR0618G201 Amborella trichopoda HOM05D005696 ORTHO05D007099 6.8e-47 191.0 144 61.1
SEGI_17930 Sequoiadendron giganteum HOM05D005696 ORTHO05D007099 5.7e-46 188.0 148 58.1
ATR0605G169 Amborella trichopoda HOM05D005696 ORTHO05D007099 2.2e-45 186.0 143 59.4
FAN09G4491 Fragaria x ananassa HOM05D005696 ORTHO05D007099 1.3e-42 176.8 119 72.3
Peaxi162Scf00006g00016 Petunia axillaris HOM05D005696 ORTHO05D007099 1.7e-42 176.4 119 68.9
SMO364G0918 Selaginella moellendorffii HOM05D005696 ORTHO05D007099 2.7e-40 169.1 131 61.1
AagrBONN_evm.TU.Sc2ySwM_344.341 Anthoceros agrestis HOM05D005696 ORTHO05D007099 8.8e-39 164.1 149 51.0
Migut.C00979 Erythranthe guttata HOM05D005696 ORTHO05D007099 5.7e-38 161.4 99 74.7
Mapoly0046s0019 Marchantia polymorpha HOM05D005696 ORTHO05D007099 4.1e-36 155.2 156 51.9
Peaxi162Scf00068g02511 Petunia axillaris HOM05D005696 ORTHO05D007099 4.1e-36 155.2 103 69.9
VMungo0540G0323 Vigna mungo HOM05D005696 ORTHO05D007099 7.0e-36 154.5 133 60.2
Zm00001eb189250 Zea mays HOM05D005696 ORTHO05D007099 7.7e-35 151.0 144 49.3
Os02g0717700 Oryza sativa ssp. japonica HOM05D005696 ORTHO05D007099 1.0e-34 150.6 145 50.3
Os09g0488000 Oryza sativa ssp. japonica HOM05D005696 ORTHO05D007099 1.3e-34 150.2 144 45.8
MCO13G065 Micromonas commoda HOM05D005696 ORTHO05D007099 1.1e-33 147.1 151 53.0
Aqoxy5G03051 Aquilegia oxysepala HOM05D005696 ORTHO05D007099 6.1e-32 141.4 100 63.0
Cre12.g560200 Chlamydomonas reinhardtii HOM05D005696 ORTHO05D007099 2.4e-28 129.4 144 46.5
SEGI_26718 Sequoiadendron giganteum HOM05D005696 ORTHO05D007099 7.0e-28 127.9 97 58.8
PRCOL_00001568 Prasinoderma coloniale HOM05D005696 ORTHO05D007099 1.6e-27 126.7 141 47.5
CBR_g37710 Chara braunii HOM05D005696 ORTHO05D007099 8.6e-26 120.9 142 45.8
VMungo1383G2413 Vigna mungo HOM05D005696 ORTHO05D007099 2.0e-22 109.8 152 42.8
Pp3c14_20090 Physcomitrium patens HOM05D005696 ORTHO05D007099 7.5e-22 107.8 85 60.0
MD12G1036200 Malus domestica HOM05D005696 ORTHO05D007099 2.4e-20 102.8 75 65.3
AagrBONN_evm.TU.Sc2ySwM_362.2223 Anthoceros agrestis HOM05D005696 ORTHO05D007099 1.6e-19 100.1 87 51.7


User provided reference genes

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