Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_19404 Corylus avellana HOM05D002559 ORTHO05D007057 2.0e-67 258.8 120 100.0
Cfa016430 Carpinus fangiana HOM05D002559 ORTHO05D007057 2.9e-26 122.1 56 98.2
CiPaw.09G000700 Carya illinoinensis HOM05D002559 ORTHO05D007057 5.2e-23 111.3 56 89.3
QL05p033446 Quercus lobata HOM05D002559 ORTHO05D007057 1.5e-22 109.8 58 82.8
Prupe.1G559200 Prunus persica HOM05D002559 ORTHO05D007057 2.6e-22 109.0 55 87.3
QL11p027350 Quercus lobata HOM05D002559 ORTHO05D007057 4.4e-22 108.2 58 81.0
Thecc.05G254500 Theobroma cacao HOM05D002559 ORTHO05D007057 1.3e-21 106.7 54 87.0
COL.COLO4_36028 Corchorus olitorius HOM05D000211 ORTHO05D002682 1.7e-21 106.3 54 87.0
Gohir.D11G248300 Gossypium hirsutum HOM05D002559 ORTHO05D007057 2.8e-21 105.5 54 87.0
Nitab4.5_0004741g0040 Nicotiana tabacum HOM05D002559 ORTHO05D007057 3.7e-21 105.1 54 88.9
Cpa.g.sc51.90 Carica papaya HOM05D002559 ORTHO05D007057 4.8e-21 104.8 57 82.5
Duzib128G1541 Durio zibethinus HOM05D002559 ORTHO05D007057 6.3e-21 104.4 54 85.2
Duzib128G1749 Durio zibethinus HOM05D002559 ORTHO05D007057 6.3e-21 104.4 54 85.2
Os01g0264500 Oryza sativa ssp. japonica HOM05D002559 ORTHO05D007057 6.3e-21 104.4 62 75.8
Potri.001G023000 Populus trichocarpa HOM05D002559 ORTHO05D007057 6.3e-21 104.4 55 83.6
RcHm_v2.0_Chr1g0332131 Rosa chinensis HOM05D002559 ORTHO05D007057 6.3e-21 104.4 58 84.5
RcHm_v2.0_Chr7g0213231 Rosa chinensis HOM05D002559 ORTHO05D007057 6.3e-21 104.4 58 84.5
Ca_19406_v3 Cicer arietinum L. HOM05D002559 ORTHO05D007057 8.3e-21 104.0 49 93.9
Gohir.A11G237800 Gossypium hirsutum HOM05D002559 ORTHO05D007057 8.3e-21 104.0 54 85.2
Nitab4.5_0002741g0030 Nicotiana tabacum HOM05D002559 ORTHO05D007057 8.3e-21 104.0 51 92.2
Sopen08g027110 Solanum pennellii HOM05D002559 ORTHO05D007057 8.3e-21 104.0 49 95.9
GSVIVG01033380001 Vitis vinifera HOM05D002559 ORTHO05D007057 8.3e-21 104.0 58 79.3
Manes.08G148900 Manihot esculenta HOM05D002559 ORTHO05D007057 1.1e-20 103.6 48 95.8
Psat0s2993g0320 Pisum sativum HOM05D002559 ORTHO05D007057 1.4e-20 103.2 49 91.8
PGR042G3247 Punica granatum HOM05D002559 ORTHO05D007057 1.4e-20 103.2 52 88.5
TPR.G17208 Trifolium pratense HOM05D002559 ORTHO05D007057 1.4e-20 103.2 49 91.8
Medtr4g053290 Medicago truncatula HOM05D002559 ORTHO05D007057 1.8e-20 102.8 49 89.8
Atru.chr2.1303 Acer truncatum HOM05D002559 ORTHO05D007057 2.4e-20 102.4 59 81.4
MD12G1001600 Malus domestica HOM05D002559 ORTHO05D007057 2.4e-20 102.4 55 81.8
TAR369G0085 Trochodendron aralioides HOM05D002559 ORTHO05D007057 2.4e-20 102.4 55 83.6
Dinv36936 Davidia involucrata HOM05D002559 ORTHO05D007057 4.1e-20 101.7 56 82.1
FAN18G1439 Fragaria x ananassa HOM05D002559 ORTHO05D007057 4.1e-20 101.7 58 82.8
FAN18G2545 Fragaria x ananassa HOM05D002559 ORTHO05D007057 4.1e-20 101.7 58 82.8
Lalb_Chr24g0392961 Lupinus albus HOM05D002559 ORTHO05D007057 4.1e-20 101.7 58 79.3
Manes.07G112700 Manihot esculenta HOM05D002559 ORTHO05D007057 4.1e-20 101.7 48 93.8
CSS0010834 Camellia sinensis var. sinensis HOM05D002559 ORTHO05D007057 5.3e-20 101.3 56 82.1
CAN.G1058.25 Capsicum annuum HOM05D002559 ORTHO05D007057 7.0e-20 100.9 49 91.8
MD14G1001500 Malus domestica HOM05D002559 ORTHO05D007057 7.0e-20 100.9 57 82.5
Aqoxy4G00339 Aquilegia oxysepala HOM05D002559 ORTHO05D007057 9.1e-20 100.5 55 83.6
FAN13G0924 Fragaria x ananassa HOM05D002559 ORTHO05D007057 1.2e-19 100.1 54 81.5
Lj3g0010749 Lotus japonicus HOM05D002559 ORTHO05D007057 1.2e-19 100.1 49 87.8
TWI32G0130 Tripterygium wilfordii HOM05D002559 ORTHO05D007057 1.2e-19 100.1 55 78.2
arahy.Tifrunner.gnm1.ann1.XAZK7H Arachis hypogaea HOM05D002559 ORTHO05D007057 1.6e-19 99.8 56 78.6
Hma1.2p1_0183F.1_g080980 Hydrangea macrophylla HOM05D002559 ORTHO05D007057 1.6e-19 99.8 48 93.8
Actinidia17309 Actinidia chinensis HOM05D002559 ORTHO05D007057 2.0e-19 99.4 56 78.6
arahy.Tifrunner.gnm1.ann1.1FX2LZ Arachis hypogaea HOM05D002559 ORTHO05D007057 2.0e-19 99.4 49 87.8
Ciclev10022656m.g Citrus clementina HOM05D002559 ORTHO05D007057 2.0e-19 99.4 59 78.0
TAR623G1558 Trochodendron aralioides HOM05D002559 ORTHO05D007057 2.0e-19 99.4 55 78.2
CANSAT78G1541 Cannabis sativa HOM05D002559 ORTHO05D007057 2.7e-19 99.0 58 75.9
Carub.0006s1632 Capsella rubella HOM05D002559 ORTHO05D007057 3.5e-19 98.6 63 69.8
Rhsim04G0086200 Rhododendron simsii HOM05D002559 ORTHO05D007057 4.5e-19 98.2 56 78.6
VMungo1127G1947 Vigna mungo HOM05D002559 ORTHO05D007057 4.5e-19 98.2 49 87.8
Actinidia38620 Actinidia chinensis HOM05D002559 ORTHO05D007057 5.9e-19 97.8 56 78.6
Peaxi162Scf00076g00818 Petunia axillaris HOM05D002559 ORTHO05D007057 5.9e-19 97.8 48 91.7
THA.LOC104827263 Tarenaya hassleriana HOM05D002559 ORTHO05D007057 5.9e-19 97.8 55 78.2
TWI60G1607 Tripterygium wilfordii HOM05D002559 ORTHO05D007057 5.9e-19 97.8 55 76.4
Oeu003637.1 Olea europaea HOM05D002559 ORTHO05D010382 7.7e-19 97.4 49 87.8
Phvul.005G124000 Phaseolus vulgaris HOM05D002559 ORTHO05D007057 7.7e-19 97.4 48 89.6
Zm00001eb333270 Zea mays HOM05D002559 ORTHO05D007057 7.7e-19 97.4 52 80.8
CDE09G1258 Ceratophyllum demersum HOM05D002559 ORTHO05D007057 1.0e-18 97.1 48 89.6
CsaV3_6G053220 Cucumis sativus L. HOM05D002559 ORTHO05D007057 1.0e-18 97.1 49 85.7
Hund23574 Selenicereus undatus HOM05D002559 ORTHO05D007057 1.0e-18 97.1 46 93.5
MELO3C034945.2 Cucumis melo HOM05D002559 ORTHO05D007057 1.3e-18 96.7 48 87.5
Glyma.12G184600 Glycine max HOM05D002559 ORTHO05D007057 1.3e-18 96.7 48 89.6
Glyma.13G316700 Glycine max HOM05D002559 ORTHO05D007057 1.3e-18 96.7 48 89.6
Nn2g15893 Nelumbo nucifera HOM05D002559 ORTHO05D007057 1.3e-18 96.7 48 89.6
Phvul.011G094200 Phaseolus vulgaris HOM05D002559 ORTHO05D007057 1.3e-18 96.7 49 83.7
PSO339G2988 Papaver somniferum HOM05D002559 ORTHO05D007057 1.7e-18 96.3 54 81.5
Cc00_g05200 Coffea canephora HOM05D002559 ORTHO05D007057 2.9e-18 95.5 48 87.5
ECA248G1300 Erigeron canadensis HOM05D002559 ORTHO05D007057 2.9e-18 95.5 55 78.2
HanXRQChr01g0024871 Helianthus annuus HOM05D002559 ORTHO05D007057 2.9e-18 95.5 55 78.2
Lsat_1_v5_gn_1_58880 Lactuca sativa HOM05D002559 ORTHO05D007057 2.9e-18 95.5 55 78.2
SGA_v2.0_scaffold114G31944 Striga asiatica HOM05D002559 ORTHO05D007057 2.9e-18 95.5 48 85.4
EL10Ac7g17037 Beta vulgaris HOM05D002559 ORTHO05D007057 5.0e-18 94.7 51 80.4
CARHR194810 Cardamine hirsuta HOM05D002559 ORTHO05D007057 5.0e-18 94.7 55 76.4
ClCG04G002960 Citrullus lanatus HOM05D002559 ORTHO05D007057 5.0e-18 94.7 48 85.4
CDE02G0936 Ceratophyllum demersum HOM05D002559 ORTHO05D007057 6.5e-18 94.4 54 83.3
Dinv37005 Davidia involucrata HOM05D002559 ORTHO05D007057 6.5e-18 94.4 56 76.8
BcaNung07325 Brassica carinata HOM05D002559 ORTHO05D007057 1.1e-17 93.6 55 74.5
Carub.0006s1654 Capsella rubella HOM05D002559 ORTHO05D007057 1.1e-17 93.6 55 74.5
Thhalv10014906m.g Eutrema salsugineum HOM05D002559 ORTHO05D007057 1.1e-17 93.6 55 74.5
Sp6g26070 Schrenkiella parvula HOM05D002559 ORTHO05D007057 1.1e-17 93.6 55 74.5
AT5G18250 Arabidopsis thaliana HOM05D002559 ORTHO05D007057 1.5e-17 93.2 55 72.7
PSO384G4200 Papaver somniferum HOM05D002559 ORTHO05D007057 1.5e-17 93.2 54 77.8
CsaV3_4G027570 Cucumis sativus L. HOM05D002559 ORTHO05D007057 2.5e-17 92.4 49 81.6
BcaC04g18713 Brassica carinata HOM05D002559 ORTHO05D007057 3.2e-17 92.0 55 72.7
A10p21270 Brassica napus HOM05D002559 ORTHO05D007057 3.2e-17 92.0 55 72.7
C09p58730 Brassica napus HOM05D002559 ORTHO05D007057 3.2e-17 92.0 55 72.7
BolC9t58714H Brassica oleracea HOM05D002559 ORTHO05D007057 3.2e-17 92.0 55 72.7
BraA10t44190Z Brassica rapa HOM05D002559 ORTHO05D007057 3.2e-17 92.0 55 72.7
AUR62012531 Chenopodium quinoa HOM05D002559 ORTHO05D007057 3.2e-17 92.0 56 75.0
AUR62014664 Chenopodium quinoa HOM05D002559 ORTHO05D007057 3.2e-17 92.0 56 75.0
Thhalv10021750m.g Eutrema salsugineum HOM05D002559 ORTHO05D007057 3.2e-17 92.0 55 72.7
Nn7g35814 Nelumbo nucifera HOM05D002559 ORTHO05D007057 3.2e-17 92.0 49 81.6
BcaB08g36692 Brassica carinata HOM05D002559 ORTHO05D007057 4.2e-17 91.7 55 72.7
Aa31LG11G11330 Aethionema arabicum HOM05D002559 ORTHO05D007057 5.5e-17 91.3 50 76.0
BcaB01g05183 Brassica carinata HOM05D002559 ORTHO05D007057 5.5e-17 91.3 49 79.6
BcaNung04944 Brassica carinata HOM05D002559 ORTHO05D007057 5.5e-17 91.3 49 79.6
A03p08750 Brassica napus HOM05D002559 ORTHO05D007057 5.5e-17 91.3 49 79.6
C03p10180 Brassica napus HOM05D002559 ORTHO05D007057 5.5e-17 91.3 49 79.6
BolC3t13503H Brassica oleracea HOM05D002559 ORTHO05D007057 5.5e-17 91.3 49 79.6
BraA03t10196Z Brassica rapa HOM05D002559 ORTHO05D007057 5.5e-17 91.3 49 79.6
AL3G13950 Arabidopsis lyrata HOM05D002559 ORTHO05D007057 9.4e-17 90.5 55 72.7
MSTRG.18809 Avicennia marina HOM05D002559 ORTHO05D007057 1.2e-16 90.1 49 79.6
Ah.15g090300 Amaranthus hybridus HOM05D002559 ORTHO05D007057 2.1e-16 89.4 66 66.7
ATR0789G037 Amborella trichopoda HOM05D002559 ORTHO05D007057 2.7e-16 89.0 56 69.6
AT3G04040 Arabidopsis thaliana HOM05D002559 ORTHO05D007057 2.7e-16 89.0 55 70.9
Gorai.007G264600 Gossypium raimondii HOM05D002559 ORTHO05D007057 2.7e-16 89.0 81 56.8
unitig_748.g7790 Utricularia gibba HOM05D002559 ORTHO05D007057 2.7e-16 89.0 56 71.4
HPP92_021154 Vanilla planifolia HOM05D002559 ORTHO05D007057 2.7e-16 89.0 47 83.0
MBI13_g37425_MAGBIO Magnolia biondii HOM05D002559 ORTHO05D007057 4.7e-16 88.2 47 83.0
Duzib177G0252 Durio zibethinus HOM05D002559 ORTHO05D007057 1.5e-14 83.2 49 79.6
SalBow7G1655 Salvia bowleyana HOM05D002559 ORTHO05D007057 2.0e-14 82.8 56 67.9
PSO541G3435 Papaver somniferum HOM05D002559 ORTHO05D007057 1.4e-12 76.6 40 82.5
SGA_v2.0_scaffold261G45917 Striga asiatica HOM05D002559 ORTHO05D007057 5.4e-12 74.7 38 86.8
Mapoly0006s0258 Marchantia polymorpha HOM05D002559 ORTHO05D007057 2.0e-11 72.8 46 63.0
AagrBONN_evm.TU.Sc2ySwM_362.2630 Anthoceros agrestis HOM05D002559 ORTHO05D007057 5.9e-11 71.2 54 51.9
Aqoxy1G03079 Aquilegia oxysepala HOM05D002559 ORTHO05D007057 1.3e-10 70.1 35 88.6
FvH4_5g23840 Fragaria vesca HOM05D002559 ORTHO05D007057 1.3e-10 70.1 35 91.4
Pp3c26_10970 Physcomitrium patens HOM05D002559 ORTHO05D007057 1.3e-10 70.1 46 58.7
Sc05g0008220 Simmondsia chinensis HOM05D002559 ORTHO05D007057 5.0e-10 68.2 37 83.8
Lalb_Chr00c36g0408721 Lupinus albus HOM05D002559 ORTHO05D007057 8.6e-10 67.4 88 45.5
Pp3c4_24240 Physcomitrium patens HOM05D002559 ORTHO05D007057 1.9e-09 66.2 46 54.3
SHI14703 Sapria himalayana HOM05D002559 ORTHO05D007057 1.2e-08 63.5 34 82.4
Eucgr.A02080 Eucalyptus grandis HOM05D002559 ORTHO05D007057 1.6e-08 63.2 47 57.4
A03p08730 Brassica napus HOM05D002559 ORTHO05D007057 1.4e-07 60.1 50 50.0
PGSC0003DMG400011890 Solanum tuberosum HOM05D002559 ORTHO05D007057 1.5e-06 56.6 49 59.2


User provided reference genes

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