Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_19342 Corylus avellana HOM05D001778 ORTHO05D006754 7.2e-273 943.3 492 100.0
Cfa020898 Carpinus fangiana HOM05D001778 ORTHO05D006754 9.3e-204 713.8 390 95.9
QL02p091165 Quercus lobata HOM05D001778 ORTHO05D006754 4.7e-171 605.1 483 71.4
CiPaw.15G183000 Carya illinoinensis HOM05D001778 ORTHO05D006754 1.3e-152 543.9 484 66.9
Prupe.7G255200 Prunus persica HOM05D001778 ORTHO05D006754 8.9e-130 468.0 488 58.8
Manes.14G138100 Manihot esculenta HOM05D001778 ORTHO05D006754 9.5e-124 448.0 487 56.1
Thecc.09G141100 Theobroma cacao HOM05D001778 ORTHO05D006754 1.3e-117 427.6 487 56.7
Manes.06G041400 Manihot esculenta HOM05D001778 ORTHO05D006754 1.9e-116 423.7 488 55.7
Atru.chr7.237 Acer truncatum HOM05D001778 ORTHO05D006754 2.5e-116 423.3 487 56.9
COL.COLO4_24112 Corchorus olitorius HOM05D001778 ORTHO05D006754 2.1e-115 420.2 487 55.9
Duzib168G2395 Durio zibethinus HOM05D001778 ORTHO05D006754 1.1e-114 417.9 491 55.2
FvH4_1g01770 Fragaria vesca HOM05D001778 ORTHO05D006754 1.3e-112 411.0 485 53.8
MD15G1160200 Malus domestica HOM05D001778 ORTHO05D006754 1.3e-112 411.0 488 53.7
RcHm_v2.0_Chr2g0086731 Rosa chinensis HOM05D001778 ORTHO05D006754 2.2e-112 410.2 486 53.7
MD02G1013400 Malus domestica HOM05D001778 ORTHO05D006754 3.2e-111 406.4 488 53.5
FAN28G2191 Fragaria x ananassa HOM05D001778 ORTHO05D006754 5.4e-111 405.6 485 53.2
FAN23G0031 Fragaria x ananassa HOM05D001778 ORTHO05D006754 2.7e-110 403.3 484 52.7
Duzib150G0892 Durio zibethinus HOM05D001778 ORTHO05D006754 4.6e-110 402.5 398 60.8
FAN19G2821 Fragaria x ananassa HOM05D001778 ORTHO05D006754 1.1e-108 397.9 484 52.9
FAN26G1059 Fragaria x ananassa HOM05D001778 ORTHO05D006754 7.3e-108 395.2 485 53.4
Potri.006G190500 Populus trichocarpa HOM05D001778 ORTHO05D006754 6.9e-106 388.7 397 59.7
TAR625G0975 Trochodendron aralioides HOM05D001778 ORTHO05D006754 4.9e-104 382.5 488 53.1
Lj4g0022620 Lotus japonicus HOM05D001778 ORTHO05D006754 2.7e-102 376.7 486 50.6
Ciclev10007967m.g Citrus clementina HOM05D001778 ORTHO05D006754 2.3e-101 373.6 485 52.2
Dinv41429 Davidia involucrata HOM05D001778 ORTHO05D006754 2.3e-101 373.6 396 58.8
arahy.Tifrunner.gnm1.ann1.6Y3UBL Arachis hypogaea HOM05D001778 ORTHO05D006754 1.3e-99 367.9 487 51.7
arahy.Tifrunner.gnm1.ann1.8YJ5TP Arachis hypogaea HOM05D001778 ORTHO05D006754 3.1e-98 363.2 487 51.5
Glyma.17G105500 Glycine max HOM05D001778 ORTHO05D006754 4.0e-98 362.8 488 50.8
Potri.018G114700 Populus trichocarpa HOM05D001778 ORTHO05D006754 5.3e-98 362.5 397 58.7
Sabra18G0097600 Salix brachista HOM05D001778 ORTHO05D006754 5.3e-98 362.5 488 50.2
TWI63G1506 Tripterygium wilfordii HOM05D001778 ORTHO05D006754 5.3e-98 362.5 490 50.2
Glyma.13G165500 Glycine max HOM05D001778 ORTHO05D006754 2.9e-96 356.7 487 50.7
Gorai.004G275100 Gossypium raimondii HOM05D001778 ORTHO05D006754 4.9e-96 355.9 398 58.0
Gohir.A08G237400 Gossypium hirsutum HOM05D001778 ORTHO05D006754 9.3e-95 351.7 398 57.0
Gohir.D08G258000 Gossypium hirsutum HOM05D001778 ORTHO05D006754 9.3e-95 351.7 398 57.8
Gohir.A06G050400 Gossypium hirsutum HOM05D001778 ORTHO05D006754 2.7e-94 350.1 486 49.0
CSS0018906 Camellia sinensis var. sinensis HOM05D001778 ORTHO05D006754 6.0e-94 349.0 501 48.3
Gohir.D06G049700 Gossypium hirsutum HOM05D001778 ORTHO05D006754 1.8e-93 347.4 486 49.2
Gorai.010G056600 Gossypium raimondii HOM05D001778 ORTHO05D006754 5.1e-93 345.9 486 48.8
VMungo1215G0692 Vigna mungo HOM05D001778 ORTHO05D006754 7.4e-92 342.0 487 49.3
Phvul.003G174300 Phaseolus vulgaris HOM05D001778 ORTHO05D006754 9.6e-92 341.7 486 48.8
Actinidia04242 Actinidia chinensis HOM05D001778 ORTHO05D006754 1.3e-91 341.3 486 48.6
TAR636G1754 Trochodendron aralioides HOM05D001778 ORTHO05D006754 1.3e-91 341.3 398 54.0
Lalb_Chr12g0198491 Lupinus albus HOM05D001778 ORTHO05D006754 4.8e-91 339.3 489 48.1
TWI34G0943 Tripterygium wilfordii HOM05D001778 ORTHO05D006754 8.2e-91 338.6 490 49.0
Medtr4g116460 Medicago truncatula HOM05D001778 ORTHO05D006754 5.3e-90 335.9 491 47.9
TAR626G1981 Trochodendron aralioides HOM05D001778 ORTHO05D006754 1.2e-89 334.7 488 49.4
Psat4g033440 Pisum sativum HOM05D001778 ORTHO05D006754 3.4e-89 333.2 490 47.3
CANSAT11G2321 Cannabis sativa HOM05D001778 ORTHO05D006754 1.0e-88 331.6 493 49.3
Lalb_Chr13g0301211 Lupinus albus HOM05D001778 ORTHO05D006754 1.3e-88 331.3 398 51.8
TAR383G0731 Trochodendron aralioides HOM05D001778 ORTHO05D006754 1.7e-88 330.9 483 48.0
TPR.G15772 Trifolium pratense HOM05D001778 ORTHO05D006754 3.8e-88 329.7 489 49.1
Ca_21617_v3 Cicer arietinum L. HOM05D001778 ORTHO05D006754 6.5e-88 328.9 486 48.1
Nn8g39707 Nelumbo nucifera HOM05D001778 ORTHO05D006754 7.9e-86 322.0 488 49.0
CSS0028105 Camellia sinensis var. sinensis HOM05D001778 ORTHO05D006754 6.7e-85 318.9 395 50.6
CsaV3_1G028450 Cucumis sativus L. HOM05D001778 ORTHO05D006754 2.2e-83 313.9 489 45.2
MELO3C010268.2 Cucumis melo HOM05D001778 ORTHO05D006754 3.7e-83 313.2 491 46.0
Actinidia21913 Actinidia chinensis HOM05D001778 ORTHO05D006754 9.0e-82 308.5 398 51.3
Nn2g12229 Nelumbo nucifera HOM05D001778 ORTHO05D006754 1.7e-80 304.3 489 47.0
Cpa.g.sc46.83 Carica papaya HOM05D001778 ORTHO05D006754 2.5e-79 300.4 489 44.8
Sed0006824 Sechium edule HOM05D001778 ORTHO05D006754 1.2e-78 298.1 432 47.9
ClCG06G011980 Citrullus lanatus HOM05D001778 ORTHO05D006754 2.4e-74 283.9 493 44.6
MBI15_g30249_MAGBIO Magnolia biondii HOM05D001778 ORTHO05D006754 2.4e-74 283.9 489 42.9
Rhsim01G0052300 Rhododendron simsii HOM05D001778 ORTHO05D006754 6.9e-74 282.3 400 48.2
Dinv44026 Davidia involucrata HOM05D001778 ORTHO05D006754 1.2e-70 271.6 482 43.4
Hma1.2p1_0182F.1_g080420 Hydrangea macrophylla HOM05D001778 ORTHO05D006754 4.7e-70 269.6 486 43.2
Lj9A707G51 Lonicera japonica HOM05D001778 ORTHO05D006754 4.7e-70 269.6 495 43.2
CSS0031767 Camellia sinensis var. sinensis HOM05D001778 ORTHO05D006754 3.3e-68 263.5 487 43.1
CSS0045678 Camellia sinensis var. sinensis HOM05D001778 ORTHO05D006754 3.3e-68 263.5 487 43.1
Aqoxy7G03539 Aquilegia oxysepala HOM05D001778 ORTHO05D006754 4.8e-67 259.6 483 44.5
CSS0010233 Camellia sinensis var. sinensis HOM05D001778 ORTHO05D006754 9.1e-66 255.4 492 41.3
Oeu055920.1 Olea europaea HOM05D001778 ORTHO05D006754 2.0e-65 254.2 408 44.4
Cc06_g07470 Coffea canephora HOM05D001778 ORTHO05D006754 3.5e-65 253.4 397 44.8
Eucgr.C04089 Eucalyptus grandis HOM05D001778 ORTHO05D006754 1.0e-64 251.9 393 46.1
CSS0010785 Camellia sinensis var. sinensis HOM05D001778 ORTHO05D006754 5.0e-64 249.6 400 45.5
Oeu051708.1 Olea europaea HOM05D001778 ORTHO05D006754 1.1e-63 248.4 396 44.2
Sed0019605 Sechium edule HOM05D001778 ORTHO05D006754 1.0e-61 241.9 395 44.8
SGA_v2.0_scaffold183G39869 Striga asiatica HOM05D001778 ORTHO05D006754 1.7e-59 234.6 397 43.6
Nitab4.5_0001555g0070 Nicotiana tabacum HOM05D001778 ORTHO05D006754 2.2e-59 234.2 485 38.6
Solyc07g007200.4 Solanum lycopersicum HOM05D001778 ORTHO05D006754 4.8e-59 233.0 483 40.4
EL10Ac8g18825 Beta vulgaris HOM05D001778 ORTHO05D006754 6.3e-59 232.6 488 37.3
Migut.K00384 Erythranthe guttata HOM05D001778 ORTHO05D006754 4.1e-58 229.9 399 43.6
Nitab4.5_0001021g0130 Nicotiana tabacum HOM05D001778 ORTHO05D006754 4.1e-58 229.9 486 38.7
Actinidia21615 Actinidia chinensis HOM05D001778 ORTHO05D006754 4.5e-57 226.5 482 39.6
Sopen07g003250 Solanum pennellii HOM05D001778 ORTHO05D006754 4.5e-57 226.5 483 39.5
PGSC0003DMG400030695 Solanum tuberosum HOM05D001778 ORTHO05D006754 2.2e-56 224.2 480 39.6
vmacro21885 Vaccinium macrocarpon HOM05D001778 ORTHO05D006754 2.9e-56 223.8 393 44.0
Nitab4.5_0005064g0020 Nicotiana tabacum HOM05D001778 ORTHO05D006754 6.5e-56 222.6 398 44.2
AUR62011263 Chenopodium quinoa HOM05D001778 ORTHO05D006754 1.9e-55 221.1 489 37.2
Nitab4.5_0007434g0030 Nicotiana tabacum HOM05D001778 ORTHO05D006754 4.2e-55 219.9 399 41.6
Hund09320 Selenicereus undatus HOM05D001778 ORTHO05D006754 1.0e-53 215.3 490 36.7
vmacro21077 Vaccinium macrocarpon HOM05D001778 ORTHO05D006754 4.0e-53 213.4 341 45.2
AUR62041443 Chenopodium quinoa HOM05D001778 ORTHO05D006754 5.2e-53 213.0 394 40.1
Peaxi162Scf01845g00008 Petunia axillaris HOM05D001778 ORTHO05D006754 6.8e-53 212.6 392 42.3
MSTRG.26321 Avicennia marina HOM05D001778 ORTHO05D006754 6.3e-51 206.1 400 42.0
Solyc01g088640.4 Solanum lycopersicum HOM05D001778 ORTHO05D006754 8.3e-51 205.7 400 42.0
PGSC0003DMG401001720 Solanum tuberosum HOM05D001778 ORTHO05D006754 1.1e-50 205.3 402 42.0
Rhsim01G0143100 Rhododendron simsii HOM05D001778 ORTHO05D006754 2.4e-50 204.1 523 35.9
Sopen01g035490 Solanum pennellii HOM05D001778 ORTHO05D006754 2.0e-49 201.1 400 41.8
PGR102G3058 Punica granatum HOM05D001778 ORTHO05D006754 2.7e-49 200.7 489 37.6
Peaxi162Scf00391g00112 Petunia axillaris HOM05D001778 ORTHO05D006754 1.7e-48 198.0 391 40.2
Ah.14g078670 Amaranthus hybridus HOM05D001778 ORTHO05D006754 1.6e-46 191.4 488 34.4
DCAR_020902 Daucus carota HOM05D001778 ORTHO05D006754 1.0e-45 188.7 428 35.5
QL04p026302 Quercus lobata HOM05D001778 ORTHO05D006754 4.0e-45 186.8 376 40.7
Dinv42918 Davidia involucrata HOM05D001778 ORTHO05D006754 4.9e-43 179.9 119 76.5
Dinv43182 Davidia involucrata HOM05D001778 ORTHO05D006754 4.9e-43 179.9 119 76.5
Cc02_g25570 Coffea canephora HOM05D001778 ORTHO05D006754 1.4e-42 178.3 373 40.2
Sc14g0000070 Simmondsia chinensis HOM05D001778 ORTHO05D006754 2.0e-41 174.5 402 36.6
Sc08g0005720 Simmondsia chinensis HOM05D001778 ORTHO05D006754 1.3e-40 171.8 400 36.8
Potri.002G140500 Populus trichocarpa HOM05D001778 ORTHO05D006754 8.6e-40 169.1 342 39.8
Oeu018162.1 Olea europaea HOM05D001778 ORTHO05D006754 1.2e-36 158.7 385 34.3
Sabra02G0109700 Salix brachista HOM05D000894 ORTHO05D001833 1.2e-36 158.7 322 39.1
Oeu024394.1 Olea europaea HOM05D001778 ORTHO05D006754 7.5e-36 156.0 336 38.1
Sabra14G0040000 Salix brachista HOM05D005587 ORTHO05D007287 1.7e-35 154.8 339 36.9
Potri.014G053500 Populus trichocarpa HOM05D001778 ORTHO05D006754 1.8e-34 151.4 341 38.1
Actinidia12627 Actinidia chinensis HOM05D001778 ORTHO05D006754 2.4e-34 151.0 128 62.5
Dinv42919 Davidia involucrata HOM05D001778 ORTHO05D006754 2.4e-34 151.0 381 37.8
Dinv43181 Davidia involucrata HOM05D001778 ORTHO05D006754 2.4e-34 151.0 381 37.8
Manes.05G058100 Manihot esculenta HOM05D001778 ORTHO05D006754 4.6e-33 146.7 355 36.9
SEGI_35279 Sequoiadendron giganteum HOM05D001778 ORTHO05D006754 7.8e-33 146.0 160 55.0
Migut.N01718 Erythranthe guttata HOM05D001778 ORTHO05D006754 2.1e-30 137.9 298 37.6
ECA236G1299 Erigeron canadensis HOM05D001778 ORTHO05D006754 1.2e-25 122.1 291 37.1
CSS0026936 Camellia sinensis var. sinensis HOM05D001778 ORTHO05D006754 2.3e-24 117.9 85 65.9
GSVIVG01012888001 Vitis vinifera HOM05D001778 ORTHO05D006754 5.6e-23 113.2 71 80.3
Os02g0798600 Oryza sativa ssp. japonica HOM05D001778 ORTHO05D006754 4.0e-21 107.1 326 32.8
Lsat_1_v5_gn_7_11921 Lactuca sativa HOM05D001778 ORTHO05D006754 9.8e-20 102.4 267 37.8
Zm00001eb192250 Zea mays HOM05D001778 ORTHO05D006754 3.0e-16 90.9 390 28.2
AagrBONN_evm.TU.Sc2ySwM_117.2576 Anthoceros agrestis HOM05D001778 ORTHO05D006754 1.6e-14 85.1 156 39.7
THA.LOC104815393 Tarenaya hassleriana HOM05D001778 ORTHO05D006754 4.7e-14 83.6 456 28.9
Aa31LG9G5180 Aethionema arabicum HOM05D001778 ORTHO05D006754 8.9e-13 79.3 375 29.1
AagrBONN_evm.TU.Sc2ySwM_117.2573 Anthoceros agrestis HOM05D001778 ORTHO05D005872 9.9e-12 75.9 156 38.5
Zm00001eb257960 Zea mays HOM05D001778 ORTHO05D006754 1.4e-10 72.0 393 27.7
Mapoly0043s0048 Marchantia polymorpha HOM05D001778 ORTHO05D005872 1.9e-10 71.6 159 39.6
Rhsim01G0126500 Rhododendron simsii HOM05D001778 ORTHO05D006754 5.4e-10 70.1 223 34.5
Pp3c25_15200 Physcomitrium patens HOM05D001778 ORTHO05D005872 2.1e-09 68.2 144 41.0
QL02p065565 Quercus lobata HOM05D001778 ORTHO05D006754 5.6e-07 60.1 58 51.7
QL93p0249_0035 Quercus lobata HOM05D001778 ORTHO05D006754 5.6e-07 60.1 58 51.7
SEGI_07537 Sequoiadendron giganteum HOM05D001778 ORTHO05D005872 2.8e-06 57.8 161 31.1


User provided reference genes

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