Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_19310 Corylus avellana HOM05D000056 ORTHO05D000019 1.4e-60 236.1 120 100.0
Cfa020878 Carpinus fangiana HOM05D000056 ORTHO05D000019 8.0e-32 140.6 113 69.0
Haze_08805 Corylus avellana HOM05D000056 ORTHO05D000019 6.3e-13 77.8 52 73.1
Haze_19262 Corylus avellana HOM05D000056 ORTHO05D000019 6.3e-13 77.8 92 47.8
Cfa020881 Carpinus fangiana HOM05D000056 ORTHO05D000019 3.1e-12 75.5 83 49.4
Cfa020882 Carpinus fangiana HOM05D000056 ORTHO05D000019 1.2e-11 73.6 64 59.4
Cfa020879 Carpinus fangiana HOM05D000056 ORTHO05D000019 1.6e-11 73.2 58 65.5
Haze_05419 Corylus avellana HOM05D000056 ORTHO05D000019 3.5e-11 72.0 84 50.0
Cfa020880 Carpinus fangiana HOM05D000056 ORTHO05D000019 7.7e-11 70.9 53 66.0
Eucgr.C00418 Eucalyptus grandis HOM05D000056 ORTHO05D000019 1.5e-09 66.6 54 57.4
CiPaw.15G180700 Carya illinoinensis HOM05D000056 ORTHO05D000019 1.0e-07 60.5 71 45.1
CiPaw.04G150100 Carya illinoinensis HOM05D000056 ORTHO05D000019 1.8e-07 59.7 75 40.0
CiPaw.15G138900 Carya illinoinensis HOM05D000056 ORTHO05D000019 2.3e-07 59.3 57 52.6
Haze_02793 Corylus avellana HOM05D000056 ORTHO05D000019 2.3e-07 59.3 60 46.7
Eucgr.C00420 Eucalyptus grandis HOM05D000056 ORTHO05D000019 2.3e-07 59.3 49 57.1
QL02p100699 Quercus lobata HOM05D000056 ORTHO05D000019 4.0e-07 58.5 60 46.7
CiPaw.15G179400 Carya illinoinensis HOM05D000056 ORTHO05D000019 5.2e-07 58.2 61 52.5
Ciclev10020236m.g Citrus clementina HOM05D000056 ORTHO05D000019 5.2e-07 58.2 62 43.5
Eucgr.C00421 Eucalyptus grandis HOM05D000056 ORTHO05D000019 5.2e-07 58.2 57 47.4
CiPaw.15G179900 Carya illinoinensis HOM05D000056 ORTHO05D000019 6.8e-07 57.8 57 52.6
Haze_01691 Corylus avellana HOM05D000056 ORTHO05D000019 6.8e-07 57.8 42 57.1
CiPaw.15G180500 Carya illinoinensis HOM05D000056 ORTHO05D000019 1.2e-06 57.0 71 43.7
MD15G1101800 Malus domestica HOM05D000056 ORTHO05D000019 1.2e-06 57.0 62 48.4
QL01p013562 Quercus lobata HOM05D000056 ORTHO05D000019 1.2e-06 57.0 84 44.0
QL02p103496 Quercus lobata HOM05D000056 ORTHO05D000019 1.2e-06 57.0 101 28.7
CiPaw.15G179600 Carya illinoinensis HOM05D000056 ORTHO05D000019 2.0e-06 56.2 61 50.8
Duzib212G1038 Durio zibethinus HOM05D000056 ORTHO05D000019 2.0e-06 56.2 58 44.8
Lj8C681T0 Lonicera japonica HOM05D000056 ORTHO05D000019 2.6e-06 55.8 60 45.0
Lj8C690T5 Lonicera japonica HOM05D000056 ORTHO05D000019 2.6e-06 55.8 60 45.0
RcHm_v2.0_Chr7g0203021 Rosa chinensis HOM05D000056 ORTHO05D000019 3.4e-06 55.5 63 46.0
Thecc.07G162000 Theobroma cacao HOM05D000056 ORTHO05D000019 3.4e-06 55.5 56 41.1
CiPaw.15G179700 Carya illinoinensis HOM05D000056 ORTHO05D000019 4.4e-06 55.1 49 57.1
Haze_02774 Corylus avellana HOM05D000056 ORTHO05D000019 4.4e-06 55.1 46 56.5
CiPaw.04G150700 Carya illinoinensis HOM05D000056 ORTHO05D000019 5.7e-06 54.7 71 39.4
CiPaw.13G028500 Carya illinoinensis HOM05D000056 ORTHO05D000019 5.7e-06 54.7 62 43.5
ECA236G5027 Erigeron canadensis HOM05D000056 ORTHO05D000019 5.7e-06 54.7 56 48.2
Manes.05G052700 Manihot esculenta HOM05D000056 ORTHO05D000019 5.7e-06 54.7 52 46.2
QL04p032552 Quercus lobata HOM05D000056 ORTHO05D000019 5.7e-06 54.7 61 44.3
QL04p032696 Quercus lobata HOM05D000056 ORTHO05D000019 5.7e-06 54.7 62 45.2
CiPaw.06G176200 Carya illinoinensis HOM05D000056 ORTHO05D000019 7.5e-06 54.3 52 44.2
CiPaw.15G180100 Carya illinoinensis HOM05D000056 ORTHO05D000019 7.5e-06 54.3 57 49.1
Ciclev10013891m.g Citrus clementina HOM05D000056 ORTHO05D000019 7.5e-06 54.3 53 47.2
Eucgr.J00441 Eucalyptus grandis HOM05D000056 ORTHO05D000019 7.5e-06 54.3 56 48.2
Glyma.02G078300 Glycine max HOM05D000056 ORTHO05D000019 7.5e-06 54.3 105 33.3
Glyma.04G068200 Glycine max HOM05D000056 ORTHO05D000019 7.5e-06 54.3 66 40.9
MBI18_g42640_MAGBIO Magnolia biondii HOM05D000056 ORTHO05D000019 7.5e-06 54.3 60 46.7
QL02p103531 Quercus lobata HOM05D000056 ORTHO05D000019 7.5e-06 54.3 61 34.4
Aqoxy2G01018 Aquilegia oxysepala HOM05D000056 ORTHO05D000019 9.8e-06 53.9 93 36.6
CiPaw.14G022400 Carya illinoinensis HOM05D000056 ORTHO05D000019 9.8e-06 53.9 46 54.3
Haze_05519 Corylus avellana HOM05D000056 ORTHO05D000019 9.8e-06 53.9 54 44.4
Lj8C707T0 Lonicera japonica HOM05D000056 ORTHO05D000019 9.8e-06 53.9 56 44.6
MD15G1119800 Malus domestica HOM05D000056 ORTHO05D000019 9.8e-06 53.9 63 46.0
GSVIVG01014793001 Vitis vinifera HOM05D000056 ORTHO05D000019 9.8e-06 53.9 49 53.1


User provided reference genes

Program Settings