Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_19305 Corylus avellana HOM05D005630 ORTHO05D006979 1.8e-117 426.0 233 100.0
Cfa020874 Carpinus fangiana HOM05D005630 ORTHO05D006979 2.6e-63 246.1 130 91.5
QL02p091555 Quercus lobata HOM05D005630 ORTHO05D006979 1.1e-61 240.7 126 90.5
TAR383G0582 Trochodendron aralioides HOM05D005630 ORTHO05D006979 8.7e-59 231.1 131 84.0
CiPaw.04G061600 Carya illinoinensis HOM05D005630 ORTHO05D006979 2.5e-58 229.6 131 84.7
CANSAT11G0524 Cannabis sativa HOM05D005630 ORTHO05D006979 5.6e-58 228.4 132 83.3
Prupe.7G253200 Prunus persica HOM05D005630 ORTHO05D006979 9.6e-58 227.6 126 84.9
ClCG10G005100 Citrullus lanatus HOM05D005630 ORTHO05D006979 3.7e-57 225.7 126 84.9
Atru.chr7.200 Acer truncatum HOM05D005630 ORTHO05D006979 4.8e-57 225.3 131 83.2
Prupe.3G048400 Prunus persica HOM05D005630 ORTHO05D006979 8.1e-57 224.6 126 84.1
Nn8g40117 Nelumbo nucifera HOM05D005630 ORTHO05D006979 1.8e-56 223.4 131 83.2
Sc08g0004950 Simmondsia chinensis HOM05D005630 ORTHO05D006979 3.1e-56 222.6 125 83.2
Gohir.A05G280400 Gossypium hirsutum HOM05D005630 ORTHO05D006979 5.3e-56 221.9 130 80.8
Duzib128G0941 Durio zibethinus HOM05D005630 ORTHO05D006979 6.9e-56 221.5 131 81.7
TWI34G2008 Tripterygium wilfordii HOM05D005630 ORTHO05D006979 6.9e-56 221.5 131 81.7
CSS0013521 Camellia sinensis var. sinensis HOM05D005630 ORTHO05D006979 9.0e-56 221.1 126 84.9
MD02G1012200 Malus domestica HOM05D005630 ORTHO05D006979 9.0e-56 221.1 132 80.3
Gohir.D05G282200 Gossypium hirsutum HOM05D005630 ORTHO05D006979 1.2e-55 220.7 130 80.0
Gorai.009G295600 Gossypium raimondii HOM05D005630 ORTHO05D006979 1.2e-55 220.7 130 80.0
MD15G1158000 Malus domestica HOM05D005630 ORTHO05D006979 3.4e-55 219.2 131 80.2
RcHm_v2.0_Chr2g0086501 Rosa chinensis HOM05D005630 ORTHO05D006979 3.4e-55 219.2 130 78.5
Potri.018G113200 Populus trichocarpa HOM05D005630 ORTHO05D006979 1.3e-54 217.2 133 78.9
Nitab4.5_0000914g0010 Nicotiana tabacum HOM05D005630 ORTHO05D006979 1.7e-54 216.9 126 81.7
Sed0022514 Sechium edule HOM05D005630 ORTHO05D006979 1.7e-54 216.9 126 79.4
PGR142G4039 Punica granatum HOM05D005630 ORTHO05D006979 2.9e-54 216.1 126 81.0
Hma1.2p1_1164F.1_g262820 Hydrangea macrophylla HOM05D005630 ORTHO05D006979 1.9e-53 213.4 126 81.7
HanXRQChr10g0314501 Helianthus annuus HOM05D005630 ORTHO05D006979 3.2e-53 212.6 131 74.8
FAN28G1107 Fragaria x ananassa HOM05D005630 ORTHO05D006979 7.1e-53 211.5 131 77.1
FAN26G1041 Fragaria x ananassa HOM05D005630 ORTHO05D006979 9.3e-53 211.1 131 77.1
COL.COLO4_35448 Corchorus olitorius HOM05D000321 ORTHO05D000204 1.2e-52 210.7 122 80.3
Oeu028785.1 Olea europaea HOM05D005630 ORTHO05D006979 1.6e-52 210.3 131 77.1
GSVIVG01001041001 Vitis vinifera HOM05D005630 ORTHO05D006979 2.1e-52 209.9 125 80.8
Eucgr.H01228 Eucalyptus grandis HOM05D005630 ORTHO05D006979 3.5e-52 209.1 131 74.0
FvH4_1g01540 Fragaria vesca HOM05D005630 ORTHO05D006979 6.0e-52 208.4 131 76.3
Nitab4.5_0003965g0050 Nicotiana tabacum HOM05D005630 ORTHO05D006979 6.0e-52 208.4 126 77.8
PGSC0003DMG400023408 Solanum tuberosum HOM05D005630 ORTHO05D006979 6.0e-52 208.4 127 79.5
Manes.03G015700 Manihot esculenta HOM05D005630 ORTHO05D006979 7.9e-52 208.0 121 83.5
Rhsim03G0057400 Rhododendron simsii HOM05D005630 ORTHO05D006979 7.9e-52 208.0 117 83.8
Eucgr.H01921 Eucalyptus grandis HOM05D005630 ORTHO05D006979 1.0e-51 207.6 131 73.3
Solyc05g054990.3 Solanum lycopersicum HOM05D005630 ORTHO05D006979 2.3e-51 206.5 122 80.3
Sopen05g033450 Solanum pennellii HOM05D005630 ORTHO05D006979 2.3e-51 206.5 122 80.3
Actinidia03956 Actinidia chinensis HOM05D005630 ORTHO05D006979 3.0e-51 206.1 131 77.1
Lsat_1_v5_gn_5_90640 Lactuca sativa HOM05D005630 ORTHO05D006979 3.0e-51 206.1 129 76.0
MELO3C014176.2 Cucumis melo HOM05D005630 ORTHO05D006979 5.1e-51 205.3 121 81.8
CsaV3_3G004770 Cucumis sativus L. HOM05D005630 ORTHO05D006979 8.7e-51 204.5 126 77.0
EL10Ac4g09637 Beta vulgaris HOM05D005630 ORTHO05D006979 3.3e-50 202.6 131 71.8
Nitab4.5_0005975g0020 Nicotiana tabacum HOM05D005630 ORTHO05D006979 2.8e-49 199.5 131 72.5
Peaxi162Scf00083g01117 Petunia axillaris HOM05D005630 ORTHO05D006979 2.8e-49 199.5 115 80.9
CAN.G1465.11 Capsicum annuum HOM05D005630 ORTHO05D006979 3.7e-49 199.1 126 76.2
Nitab4.5_0002880g0080 Nicotiana tabacum HOM05D005630 ORTHO05D006979 3.7e-49 199.1 117 78.6
MSTRG.19630 Avicennia marina HOM05D005630 ORTHO05D006979 4.8e-49 198.7 131 75.6
Cc06_g16720 Coffea canephora HOM05D005630 ORTHO05D006979 4.8e-49 198.7 132 75.0
Sopen02g029090 Solanum pennellii HOM05D005630 ORTHO05D006979 8.2e-49 198.0 125 76.0
ECA234G3390 Erigeron canadensis HOM05D000399 ORTHO05D000304 1.1e-48 197.6 131 74.0
Lj3g0020108 Lotus japonicus HOM05D005630 ORTHO05D006979 1.1e-48 197.6 165 66.1
Actinidia37787 Actinidia chinensis HOM05D005630 ORTHO05D006979 1.8e-48 196.8 120 78.3
Solyc02g084380.3 Solanum lycopersicum HOM05D005630 ORTHO05D006979 2.4e-48 196.4 119 78.2
CAN.G1505.19 Capsicum annuum HOM05D005630 ORTHO05D006979 4.0e-48 195.7 125 74.4
Ciclev10009802m.g Citrus clementina HOM05D005630 ORTHO05D006979 4.0e-48 195.7 135 72.6
BcaC05g28577 Brassica carinata HOM05D005630 ORTHO05D006979 2.0e-47 193.4 132 71.2
A05p30870 Brassica napus HOM05D005630 ORTHO05D006979 2.0e-47 193.4 132 71.2
C05p46800 Brassica napus HOM05D005630 ORTHO05D006979 2.0e-47 193.4 132 71.2
BolC5t33410H Brassica oleracea HOM05D005630 ORTHO05D006979 2.0e-47 193.4 132 71.2
Lj2g0025219 Lotus japonicus HOM05D005630 ORTHO05D006979 4.5e-47 192.2 142 71.8
THA.LOC104815401 Tarenaya hassleriana HOM05D005630 ORTHO05D006979 4.5e-47 192.2 129 68.2
FAN23G2038 Fragaria x ananassa HOM05D005630 ORTHO05D006979 5.8e-47 191.8 173 59.0
BraA05t21929Z Brassica rapa HOM05D005630 ORTHO05D006979 7.6e-47 191.4 132 71.2
BcaB06g25926 Brassica carinata HOM05D005630 ORTHO05D006979 1.0e-46 191.0 131 68.7
AL3G32110 Arabidopsis lyrata HOM05D005630 ORTHO05D006979 2.2e-46 189.9 132 69.7
Medtr7g103190 Medicago truncatula HOM05D005630 ORTHO05D006979 2.2e-46 189.9 130 68.5
AT3G18760 Arabidopsis thaliana HOM05D005630 ORTHO05D006979 2.9e-46 189.5 132 69.7
Migut.J01281 Erythranthe guttata HOM05D005630 ORTHO05D006979 2.9e-46 189.5 130 71.5
Carub.0003s1855 Capsella rubella HOM05D005630 ORTHO05D006979 3.8e-46 189.1 132 69.7
Sp3g16800 Schrenkiella parvula HOM05D005630 ORTHO05D006979 3.8e-46 189.1 132 69.7
BcaB04g19003 Brassica carinata HOM05D005630 ORTHO05D006979 4.9e-46 188.7 131 67.9
Thhalv10021733m.g Eutrema salsugineum HOM05D005630 ORTHO05D006979 4.9e-46 188.7 132 68.9
Aa31LG8G5570 Aethionema arabicum HOM05D005630 ORTHO05D006979 8.4e-46 188.0 132 68.9
vmacro07529 Vaccinium macrocarpon HOM05D005630 ORTHO05D006979 8.4e-46 188.0 130 73.1
DCAR_019353 Daucus carota HOM05D000452 ORTHO05D000647 1.1e-45 187.6 113 75.2
THA.LOC104826572 Tarenaya hassleriana HOM05D005630 ORTHO05D006979 1.1e-45 187.6 132 69.7
Ca_08945_v3 Cicer arietinum L. HOM05D005630 ORTHO05D006979 1.4e-45 187.2 126 70.6
VMungo0464G1149 Vigna mungo HOM05D005630 ORTHO05D006979 1.4e-45 187.2 129 69.8
Phvul.004G170400 Phaseolus vulgaris HOM05D005630 ORTHO05D006979 3.2e-45 186.0 126 72.2
Psat3g037680 Pisum sativum HOM05D005630 ORTHO05D006979 4.2e-45 185.7 126 69.0
Glyma.01G008800 Glycine max HOM05D005630 ORTHO05D006979 7.1e-45 184.9 120 75.0
TPR.G21379 Trifolium pratense HOM05D005630 ORTHO05D006979 9.3e-45 184.5 130 68.5
Thecc.10G171800 Theobroma cacao HOM05D005630 ORTHO05D006979 1.2e-44 184.1 111 78.4
C03p49710 Brassica napus HOM05D005630 ORTHO05D006979 1.6e-44 183.7 132 66.7
SGA_v2.0_scaffold336G49163 Striga asiatica HOM05D005630 ORTHO05D006979 2.7e-44 183.0 132 68.9
TPR.G31501 Trifolium pratense HOM05D005630 ORTHO05D006979 2.7e-44 183.0 142 68.3
Glyma.16G077600 Glycine max HOM05D005630 ORTHO05D006979 3.5e-44 182.6 131 71.0
BolC3t17269H Brassica oleracea HOM05D005630 ORTHO05D006979 4.6e-44 182.2 132 66.7
BraA03t13240Z Brassica rapa HOM05D005630 ORTHO05D006979 4.6e-44 182.2 132 65.9
CARHR094150 Cardamine hirsuta HOM05D005630 ORTHO05D006979 7.9e-44 181.4 131 67.2
arahy.Tifrunner.gnm1.ann1.N9H741 Arachis hypogaea HOM05D005630 ORTHO05D006979 1.3e-43 180.6 120 71.7
Dinv41416 Davidia involucrata HOM05D005630 ORTHO05D006979 1.8e-43 180.3 112 81.2
Os01g0220300 Oryza sativa ssp. japonica HOM05D005630 ORTHO05D006979 1.8e-43 180.3 131 67.2
Lalb_Chr01g0020901 Lupinus albus HOM05D005630 ORTHO05D006979 3.9e-43 179.1 120 71.7
VMungo0464G1592 Vigna mungo HOM05D005630 ORTHO05D006979 3.9e-43 179.1 126 69.0
Oeu040774.1 Olea europaea HOM05D005630 ORTHO05D006979 6.7e-43 178.3 168 57.7
PSO210G6044 Papaver somniferum HOM05D005630 ORTHO05D006979 6.7e-43 178.3 131 69.5
unitig_46.g18374 Utricularia gibba HOM05D005736 ORTHO05D007215 6.7e-43 178.3 122 70.5
PSO210G0346 Papaver somniferum HOM05D005630 ORTHO05D006979 8.7e-43 177.9 131 69.5
Medtr6g088605 Medicago truncatula HOM05D005630 ORTHO05D006979 1.5e-42 177.2 142 64.8
SalBow1G1736 Salvia bowleyana HOM05D005630 ORTHO05D006979 1.9e-42 176.8 115 73.0
unitig_46.g18303 Utricularia gibba HOM05D005630 ORTHO05D006979 9.7e-42 174.5 122 69.7
Psat5g026240 Pisum sativum HOM05D005630 ORTHO05D006979 1.6e-41 173.7 99 78.8
A03p40820 Brassica napus HOM05D005630 ORTHO05D006979 1.4e-40 170.6 132 64.4
FAN19G2317 Fragaria x ananassa HOM05D005630 ORTHO05D006979 9.0e-40 167.9 131 64.9
Ah.01g003710 Amaranthus hybridus HOM05D005630 ORTHO05D006979 8.5e-38 161.4 127 64.6
MBI07_g35858_MAGBIO Magnolia biondii HOM05D005630 ORTHO05D006979 1.4e-37 160.6 123 65.9
Zm00001eb119770 Zea mays HOM05D005630 ORTHO05D006979 3.2e-37 159.5 115 65.2
HPP92_008634 Vanilla planifolia HOM05D005630 ORTHO05D006979 2.7e-36 156.4 132 59.8
CDE02G3819 Ceratophyllum demersum HOM05D005630 ORTHO05D006979 7.9e-36 154.8 84 85.7
unitig_48.g30288 Utricularia gibba HOM05D005630 ORTHO05D006979 2.2e-33 146.7 100 71.0
Eucgr.B02192 Eucalyptus grandis HOM05D005630 ORTHO05D006979 2.7e-28 129.8 78 73.1
AagrBONN_evm.TU.Sc2ySwM_117.2919 Anthoceros agrestis HOM05D005630 ORTHO05D006979 1.5e-26 124.0 103 53.4
Pp3c3_21570 Physcomitrium patens HOM05D005630 ORTHO05D006979 1.7e-25 120.6 103 49.5
Lj7A451T27 Lonicera japonica HOM05D005630 ORTHO05D006979 1.4e-24 117.5 61 88.5
SMO146G0230 Selaginella moellendorffii HOM05D005630 ORTHO05D006979 2.4e-24 116.7 101 51.5
Cpa.g.sc20.36 Carica papaya HOM05D005630 ORTHO05D006979 9.1e-24 114.8 87 66.7
Mapoly0179s0002 Marchantia polymorpha HOM05D005630 ORTHO05D006979 1.7e-22 110.5 103 49.5
MBI07_g26347_MAGBIO Magnolia biondii HOM05D005630 ORTHO05D006979 1.1e-21 107.8 69 73.9
SGA_v2.0_scaffold416G51224 Striga asiatica HOM05D005630 ORTHO05D006979 3.2e-21 106.3 61 78.7
CBR_g37184 Chara braunii HOM05D005630 ORTHO05D006979 7.2e-21 105.1 98 52.0
Eucgr.L01073 Eucalyptus grandis HOM05D005630 ORTHO05D006979 1.2e-20 104.4 71 70.4
AUR62001080 Chenopodium quinoa HOM05D005630 ORTHO05D006979 2.1e-20 103.6 61 77.0
AUR62004880 Chenopodium quinoa HOM05D005630 ORTHO05D006979 2.6e-18 96.7 61 72.1
ATR1096G006 Amborella trichopoda HOM05D005630 ORTHO05D006979 4.4e-18 95.9 66 68.2
Nn2g11495 Nelumbo nucifera HOM05D005630 ORTHO05D006979 5.7e-18 95.5 67 68.7
SEGI_16423 Sequoiadendron giganteum HOM05D005630 ORTHO05D006979 1.8e-16 90.5 85 51.8
MD16G1239100 Malus domestica HOM05D005630 ORTHO05D006979 1.0e-14 84.7 57 66.7
TPR.G10852 Trifolium pratense HOM05D005630 ORTHO05D006979 9.4e-13 78.2 49 71.4
AUR62039003 Chenopodium quinoa HOM05D005630 ORTHO05D006979 3.3e-10 69.7 48 62.5
Medtr5g037160 Medicago truncatula HOM05D005630 ORTHO05D000782 4.8e-09 65.9 34 85.3
Cre12.g558000 Chlamydomonas reinhardtii HOM05D005630 ORTHO05D006979 1.1e-08 64.7 96 34.4
SalBow1G6627 Salvia bowleyana HOM05D005630 ORTHO05D006979 1.1e-08 64.7 49 63.3
MCO04G088 Micromonas commoda HOM05D005630 ORTHO05D006979 1.4e-08 64.3 98 30.6


User provided reference genes

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