Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_19293 Corylus avellana HOM05D007151 ORTHO05D009056 2.4e-245 851.7 413 100.0
Cfa020867 Carpinus fangiana HOM05D007151 ORTHO05D009056 3.4e-231 804.7 425 92.7
CiPaw.15G171100 Carya illinoinensis HOM05D007151 ORTHO05D009056 1.2e-199 699.9 425 80.9
QL02p091761 Quercus lobata HOM05D007151 ORTHO05D009056 1.0e-195 686.8 430 79.1
GSVIVG01001047001 Vitis vinifera HOM05D007151 ORTHO05D009056 3.3e-178 628.6 406 75.6
MD02G1011800 Malus domestica HOM05D007151 ORTHO05D009056 2.4e-176 622.5 406 75.6
Prupe.7G252600 Prunus persica HOM05D007151 ORTHO05D009056 4.5e-175 618.2 407 74.7
RcHm_v2.0_Chr2g0086401 Rosa chinensis HOM05D007151 ORTHO05D009056 2.2e-174 615.9 399 75.4
CSS0031191 Camellia sinensis var. sinensis HOM05D007151 ORTHO05D009056 5.5e-173 611.3 401 73.8
TWI34G1895 Tripterygium wilfordii HOM05D007151 ORTHO05D009056 1.6e-172 609.8 441 70.3
Duzib168G1221 Durio zibethinus HOM05D007151 ORTHO05D009056 6.7e-171 604.4 406 73.4
Sabra18G0095800 Salix brachista HOM05D007151 ORTHO05D009056 3.3e-170 602.1 430 70.0
Actinidia04269 Actinidia chinensis HOM05D007151 ORTHO05D009056 4.3e-170 601.7 411 70.8
FvH4_1g01491 Fragaria vesca HOM05D007151 ORTHO05D009056 4.3e-170 601.7 392 74.5
Manes.06G039800 Manihot esculenta HOM05D007151 ORTHO05D009056 5.7e-170 601.3 445 68.5
FAN26G2518 Fragaria x ananassa HOM05D007151 ORTHO05D009056 1.6e-169 599.7 392 74.5
CANSAT11G1483 Cannabis sativa HOM05D007151 ORTHO05D009056 1.8e-168 596.3 416 70.0
Potri.018G112600 Populus trichocarpa HOM05D007151 ORTHO05D009056 1.8e-168 596.3 432 69.7
TAR626G0740 Trochodendron aralioides HOM05D007151 ORTHO05D009056 1.8e-168 596.3 401 71.8
Ciclev10008285m.g Citrus clementina HOM05D007151 ORTHO05D009056 6.9e-168 594.3 417 69.1
Thecc.09G036700 Theobroma cacao HOM05D007151 ORTHO05D009056 1.5e-167 593.2 404 72.0
Actinidia04263 Actinidia chinensis HOM05D007151 ORTHO05D009056 4.5e-167 591.7 409 70.2
Gohir.A13G185600 Gossypium hirsutum HOM05D007151 ORTHO05D009056 8.5e-166 587.4 406 69.7
Cpa.g.sc46.106 Carica papaya HOM05D007151 ORTHO05D009056 1.9e-165 586.3 404 70.3
Gohir.D13G192100 Gossypium hirsutum HOM05D007151 ORTHO05D009056 7.2e-165 584.3 406 69.5
Gorai.013G218000 Gossypium raimondii HOM05D007151 ORTHO05D009056 1.6e-164 583.2 406 69.5
COL.COLO4_18747 Corchorus olitorius HOM05D007151 ORTHO05D009056 2.7e-164 582.4 430 67.7
Atru.chr7.189 Acer truncatum HOM05D007151 ORTHO05D009056 4.6e-164 581.6 410 68.5
vmacro21874 Vaccinium macrocarpon HOM05D007151 ORTHO05D009056 2.0e-162 576.2 409 68.7
Sed0008117 Sechium edule HOM05D007151 ORTHO05D009056 3.7e-161 572.0 401 69.1
Lj6g0019652 Lotus japonicus HOM05D007151 ORTHO05D009056 8.2e-161 570.9 434 64.5
FAN23G0937 Fragaria x ananassa HOM05D007151 ORTHO05D009056 2.4e-160 569.3 416 68.8
CsaV3_1G028600 Cucumis sativus L. HOM05D007151 ORTHO05D009056 7.7e-159 564.3 421 67.0
Eucgr.C00404 Eucalyptus grandis HOM05D007151 ORTHO05D009056 2.9e-158 562.4 405 67.4
ClCG06G012110 Citrullus lanatus HOM05D007151 ORTHO05D009056 4.2e-157 558.5 408 68.9
Lj9A711T48 Lonicera japonica HOM05D007151 ORTHO05D009056 4.2e-157 558.5 449 63.0
Glyma.15G208200 Glycine max HOM05D007151 ORTHO05D009056 1.6e-156 556.6 424 63.9
Nitab4.5_0000416g0100 Nicotiana tabacum HOM05D007151 ORTHO05D009056 2.1e-156 556.2 404 67.1
Aqoxy7G03505 Aquilegia oxysepala HOM05D007151 ORTHO05D009056 7.9e-156 554.3 407 66.1
Psat1g022920 Pisum sativum HOM05D007151 ORTHO05D009056 3.9e-155 552.0 414 64.3
Peaxi162Scf00347g00330 Petunia axillaris HOM05D007151 ORTHO05D009056 8.8e-155 550.8 405 65.9
Nn8g39757 Nelumbo nucifera HOM05D007151 ORTHO05D009056 1.5e-154 550.1 408 67.2
Nitab4.5_0010178g0030 Nicotiana tabacum HOM05D007151 ORTHO05D009056 3.3e-154 548.9 408 66.2
Medtr2g449830 Medicago truncatula HOM05D007151 ORTHO05D009056 1.7e-153 546.6 423 61.5
Dinv41414 Davidia involucrata HOM05D007151 ORTHO05D009056 1.4e-152 543.5 369 71.8
MELO3C010253.2 Cucumis melo HOM05D007151 ORTHO05D009056 9.1e-152 540.8 415 64.8
TPR.G31930 Trifolium pratense HOM05D007151 ORTHO05D009056 4.5e-151 538.5 417 63.1
PGR142G3459 Punica granatum HOM05D007151 ORTHO05D009056 7.7e-151 537.7 407 65.1
arahy.Tifrunner.gnm1.ann1.BVF972 Arachis hypogaea HOM05D007151 ORTHO05D009056 2.9e-150 535.8 407 63.9
VMungo1309G1509 Vigna mungo HOM05D007151 ORTHO05D009056 1.1e-149 533.9 421 61.8
CAN.G520.35 Capsicum annuum HOM05D007151 ORTHO05D009056 1.9e-149 533.1 411 64.7
HanXRQChr10g0314511 Helianthus annuus HOM05D007151 ORTHO05D009056 1.2e-148 530.4 430 60.5
PGSC0003DMG400011834 Solanum tuberosum HOM05D007151 ORTHO05D009056 1.2e-148 530.4 411 64.0
Sc08g0005090 Simmondsia chinensis HOM05D007151 ORTHO05D009056 8.0e-148 527.7 405 64.0
CARHR104080 Cardamine hirsuta HOM05D007151 ORTHO05D009056 3.0e-147 525.8 395 65.1
DCAR_019364 Daucus carota HOM05D007151 ORTHO05D009056 4.0e-147 525.4 405 63.7
Solyc07g005240.4 Solanum lycopersicum HOM05D007151 ORTHO05D009056 6.7e-147 524.6 411 63.3
A03p51030 Brassica napus HOM05D007151 ORTHO05D009056 2.0e-146 523.1 401 64.1
BraA03t14189Z Brassica rapa HOM05D007151 ORTHO05D009056 2.0e-146 523.1 401 64.3
Thhalv10025257m.g Eutrema salsugineum HOM05D007151 ORTHO05D009056 2.6e-146 522.7 407 63.4
Hund21618 Selenicereus undatus HOM05D007151 ORTHO05D009056 2.6e-146 522.7 406 61.8
AT2G22650 Arabidopsis thaliana HOM05D007151 ORTHO05D009056 1.7e-145 520.0 405 63.5
THA.LOC104826576 Tarenaya hassleriana HOM05D007151 ORTHO05D009056 1.7e-145 520.0 411 62.5
ECA234G3390 Erigeron canadensis HOM05D000399 ORTHO05D000304 3.7e-145 518.8 402 62.9
C07p49460 Brassica napus HOM05D007151 ORTHO05D009056 1.4e-144 516.9 401 63.3
BolC7t45451H Brassica oleracea HOM05D007151 ORTHO05D009056 5.3e-144 515.0 401 63.3
Lsat_1_v5_gn_0_44621 Lactuca sativa HOM05D007151 ORTHO05D009056 2.7e-143 512.7 404 61.9
Lsat_1_v5_gn_5_90740 Lactuca sativa HOM05D007151 ORTHO05D009056 2.7e-143 512.7 404 61.9
PSO063G2965 Papaver somniferum HOM05D007151 ORTHO05D009056 3.5e-143 512.3 413 61.0
Oeu052172.1 Olea europaea HOM05D007151 ORTHO05D009056 8.5e-142 507.7 406 61.6
AL3G44210 Arabidopsis lyrata HOM05D007151 ORTHO05D009056 1.1e-141 507.3 402 63.2
EL10Ac8g18840 Beta vulgaris HOM05D007151 ORTHO05D009056 1.1e-141 507.3 415 60.0
Cc06_g23440 Coffea canephora HOM05D007151 ORTHO05D009056 1.9e-141 506.5 411 61.8
Phvul.009G208100 Phaseolus vulgaris HOM05D007151 ORTHO05D009056 2.7e-140 502.7 422 59.2
arahy.Tifrunner.gnm1.ann1.36BD1U Arachis hypogaea HOM05D007151 ORTHO05D009056 8.0e-140 501.1 380 63.9
Aa31sc130G90 Aethionema arabicum HOM05D007151 ORTHO05D009056 4.0e-139 498.8 413 59.8
Sp7g16040 Schrenkiella parvula HOM05D007151 ORTHO05D009056 5.7e-138 495.0 399 61.7
AUR62042027 Chenopodium quinoa HOM05D007151 ORTHO05D009056 2.2e-137 493.0 399 59.4
CSS0035136 Camellia sinensis var. sinensis HOM05D007151 ORTHO05D009056 4.1e-136 488.8 297 75.4
Migut.K00359 Erythranthe guttata HOM05D007151 ORTHO05D009056 2.9e-134 482.6 405 57.8
Ca_25731_v3 Cicer arietinum L. HOM05D007151 ORTHO05D009056 8.8e-131 471.1 357 63.0
SGA_v2.0_scaffold336G49159 Striga asiatica HOM05D007151 ORTHO05D009056 1.3e-129 467.2 409 55.3
FvH4_5g35120 Fragaria vesca HOM05D007151 ORTHO05D009056 1.7e-129 466.8 290 74.8
Zm00001eb268060 Zea mays HOM05D007151 ORTHO05D009056 4.1e-128 462.2 399 57.4
Os06g0181400 Oryza sativa ssp. japonica HOM05D007151 ORTHO05D009056 1.0e-126 457.6 395 57.2
Ah.14g078500 Amaranthus hybridus HOM05D007151 ORTHO05D009056 2.1e-124 449.9 400 56.0
Lalb_Chr08g0233881 Lupinus albus HOM05D007151 ORTHO05D009056 5.2e-123 445.3 297 69.4
Sopen07g001150 Solanum pennellii HOM05D007151 ORTHO05D009056 2.6e-122 443.0 360 61.4
SGA_v2.0_scaffold206G41840 Striga asiatica HOM05D007151 ORTHO05D009056 7.5e-122 441.4 410 53.7
CDE05G1962 Ceratophyllum demersum HOM05D007151 ORTHO05D009056 9.8e-122 441.0 406 55.7
SEGI_09059 Sequoiadendron giganteum HOM05D007151 ORTHO05D009056 4.7e-116 422.2 424 51.2
Rhsim01G0049000 Rhododendron simsii HOM05D007151 ORTHO05D008498 5.2e-115 418.7 357 59.4
Carub.0013s0015 Capsella rubella HOM05D007151 ORTHO05D009056 5.0e-110 402.1 302 64.9
unitig_899.g15451 Utricularia gibba HOM05D007151 ORTHO05D009056 6.2e-108 395.2 376 52.1
ATR0629G078 Amborella trichopoda HOM05D007151 ORTHO05D009056 1.4e-107 394.0 365 55.3
Mapoly0072s0110 Marchantia polymorpha HOM05D007151 ORTHO05D009056 2.3e-99 366.7 413 45.3
Pp3c21_4180 Physcomitrium patens HOM05D007151 ORTHO05D009056 8.1e-84 315.1 397 44.1
AagrBONN_evm.TU.Sc2ySwM_117.1501 Anthoceros agrestis HOM05D007151 ORTHO05D009056 2.5e-64 250.4 304 43.1
Cc06_g23410 Coffea canephora HOM05D007151 ORTHO05D009056 5.3e-59 232.6 272 48.9
CANSAT11G0850 Cannabis sativa HOM05D007151 ORTHO05D009056 1.3e-49 201.4 127 74.0
PRCOL_00000450 Prasinoderma coloniale HOM05D007151 ORTHO05D009056 3.9e-46 189.9 392 34.7
SMO364G0487 Selaginella moellendorffii HOM05D007151 ORTHO05D009056 9.1e-43 178.7 200 47.0
Cre02.g109800 Chlamydomonas reinhardtii HOM05D007151 ORTHO05D009056 1.0e-38 165.2 516 28.7
Lalb_Chr08g0233871 Lupinus albus HOM05D007151 ORTHO05D009056 8.8e-30 135.6 109 64.2
CBR_g19142 Chara braunii HOM05D007151 ORTHO05D009056 1.9e-24 117.9 246 31.3
MCO12G285 Micromonas commoda HOM05D007151 ORTHO05D009056 4.7e-23 113.2 496 25.0
TPR.G31928 Trifolium pratense HOM05D007151 ORTHO05D009056 1.1e-19 102.1 101 51.5
HPP92_018514 Vanilla planifolia HOM05D007151 ORTHO05D009056 9.2e-11 72.4 84 50.0
Hma1.2p1_0182F.1_g080700 Hydrangea macrophylla HOM05D007151 ORTHO05D009056 2.7e-10 70.9 43 74.4
FAN07G0026 Fragaria x ananassa HOM05D000007 ORTHO05D005026 2.9e-09 67.4 41 68.3
FAN11G2323 Fragaria x ananassa HOM05D007151 ORTHO05D009056 4.7e-07 60.1 72 48.6


User provided reference genes

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