Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_19191 Corylus avellana HOM05D002928 ORTHO05D003794 7.3e-29 129.8 62 100.0
Nitab4.5_0005653g0030 Nicotiana tabacum HOM05D002928 ORTHO05D003794 2.2e-17 91.7 56 80.4
MSTRG.19654 Avicennia marina HOM05D002928 ORTHO05D003794 2.9e-17 91.3 44 97.7
CAN.G160.55 Capsicum annuum HOM05D002928 ORTHO05D003794 2.9e-17 91.3 47 91.5
CAN.G551.45 Capsicum annuum HOM05D002928 ORTHO05D003794 2.9e-17 91.3 47 91.5
Cfa020818 Carpinus fangiana HOM05D002928 ORTHO05D003794 2.9e-17 91.3 47 91.5
ClCG02G014440 Citrullus lanatus HOM05D002928 ORTHO05D003794 2.9e-17 91.3 47 91.5
Haze_19196 Corylus avellana HOM05D002928 ORTHO05D003794 2.9e-17 91.3 47 91.5
MELO3C004130.2 Cucumis melo HOM05D002928 ORTHO05D003794 2.9e-17 91.3 47 91.5
CsaV3_2G007560 Cucumis sativus L. HOM05D002928 ORTHO05D003794 2.9e-17 91.3 47 91.5
ECA248G1996 Erigeron canadensis HOM05D002928 ORTHO05D003794 2.9e-17 91.3 47 91.5
HanXRQChr05g0143981 Helianthus annuus HOM05D002928 ORTHO05D003794 2.9e-17 91.3 47 91.5
Lsat_1_v5_gn_8_63581 Lactuca sativa HOM05D002928 ORTHO05D003794 2.9e-17 91.3 47 91.5
Lj1C1016G8 Lonicera japonica HOM05D002928 ORTHO05D003794 2.9e-17 91.3 56 80.4
Lj1C1017T2 Lonicera japonica HOM05D002928 ORTHO05D003794 2.9e-17 91.3 56 80.4
Lj1C1019G10 Lonicera japonica HOM05D002928 ORTHO05D003794 2.9e-17 91.3 56 80.4
Nitab4.5_0001571g0050 Nicotiana tabacum HOM05D002928 ORTHO05D003794 2.9e-17 91.3 47 91.5
Nitab4.5_0002891g0050 Nicotiana tabacum HOM05D002928 ORTHO05D003794 2.9e-17 91.3 47 91.5
Nitab4.5_0008875g0030 Nicotiana tabacum HOM05D002928 ORTHO05D003794 2.9e-17 91.3 47 91.5
Peaxi162Scf00062g00219 Petunia axillaris HOM05D002928 ORTHO05D003794 2.9e-17 91.3 47 91.5
SalBow1G3419 Salvia bowleyana HOM05D002928 ORTHO05D003794 2.9e-17 91.3 47 91.5
Sed0012591 Sechium edule HOM05D002928 ORTHO05D003794 2.9e-17 91.3 47 91.5
Sed0017586 Sechium edule HOM05D002928 ORTHO05D003794 2.9e-17 91.3 47 91.5
Solyc12g009990.2 Solanum lycopersicum HOM05D002928 ORTHO05D003794 2.9e-17 91.3 47 91.5
Sopen12g004860 Solanum pennellii HOM05D002928 ORTHO05D003794 2.9e-17 91.3 47 91.5
PGSC0003DMG400007905 Solanum tuberosum HOM05D002928 ORTHO05D003794 2.9e-17 91.3 47 91.5
SGA_v2.0_scaffold45G17027 Striga asiatica HOM05D002928 ORTHO05D003794 2.9e-17 91.3 47 91.5
Rhsim03G0257400 Rhododendron simsii HOM05D002928 ORTHO05D003794 3.7e-17 90.9 56 80.4
Oeu054272.1 Olea europaea HOM05D002928 ORTHO05D003794 4.9e-17 90.5 47 89.4
Atru.chr7.18 Acer truncatum HOM05D002928 ORTHO05D003794 6.4e-17 90.1 47 89.4
Actinidia38670 Actinidia chinensis HOM05D002928 ORTHO05D003794 6.4e-17 90.1 47 89.4
Aqoxy3G02300 Aquilegia oxysepala HOM05D002928 ORTHO05D003794 6.4e-17 90.1 44 95.5
BcaNung02974 Brassica carinata HOM05D002928 ORTHO05D003794 6.4e-17 90.1 44 95.5
CSS0004317 Camellia sinensis var. sinensis HOM05D002928 ORTHO05D003794 6.4e-17 90.1 47 89.4
CSS0013967 Camellia sinensis var. sinensis HOM05D002928 ORTHO05D003794 6.4e-17 90.1 47 89.4
CSS0014470 Camellia sinensis var. sinensis HOM05D002928 ORTHO05D003794 6.4e-17 90.1 47 89.4
CSS0027124 Camellia sinensis var. sinensis HOM05D002928 ORTHO05D003794 6.4e-17 90.1 47 89.4
CANSAT11G1221 Cannabis sativa HOM05D002928 ORTHO05D003794 6.4e-17 90.1 47 89.4
Carub.0007s0997 Capsella rubella HOM05D002928 ORTHO05D003794 6.4e-17 90.1 44 95.5
CiPaw.15G167900 Carya illinoinensis HOM05D002928 ORTHO05D003794 6.4e-17 90.1 47 89.4
Ciclev10007753m.g Citrus clementina HOM05D002928 ORTHO05D003794 6.4e-17 90.1 44 95.5
COL.COLO4_18815 Corchorus olitorius HOM05D002928 ORTHO05D003794 6.4e-17 90.1 47 89.4
Dinv42848 Davidia involucrata HOM05D002928 ORTHO05D003794 6.4e-17 90.1 47 89.4
Dinv43252 Davidia involucrata HOM05D002928 ORTHO05D003794 6.4e-17 90.1 47 89.4
Duzib168G1829 Durio zibethinus HOM05D002928 ORTHO05D003794 6.4e-17 90.1 47 89.4
Duzib187G0297 Durio zibethinus HOM05D002928 ORTHO05D003794 6.4e-17 90.1 47 89.4
Glyma.06G220500 Glycine max HOM05D002928 ORTHO05D003794 6.4e-17 90.1 44 95.5
Gohir.A06G098000 Gossypium hirsutum HOM05D002928 ORTHO05D003794 6.4e-17 90.1 47 89.4
Gohir.A07G027100 Gossypium hirsutum HOM05D002928 ORTHO05D003794 6.4e-17 90.1 47 89.4
Gohir.D06G098500 Gossypium hirsutum HOM05D002928 ORTHO05D003794 6.4e-17 90.1 47 89.4
Gohir.D07G031100 Gossypium hirsutum HOM05D002928 ORTHO05D003794 6.4e-17 90.1 47 89.4
Gorai.001G032400 Gossypium raimondii HOM05D002928 ORTHO05D003794 6.4e-17 90.1 47 89.4
Gorai.010G113600 Gossypium raimondii HOM05D002928 ORTHO05D003794 6.4e-17 90.1 47 89.4
Hma1.2p1_0222F.1_g093640 Hydrangea macrophylla HOM05D002928 ORTHO05D003794 6.4e-17 90.1 47 89.4
Lj6g0013054 Lotus japonicus HOM05D002928 ORTHO05D003794 6.4e-17 90.1 47 89.4
Lalb_Chr11g0072651 Lupinus albus HOM05D002928 ORTHO05D003794 6.4e-17 90.1 47 89.4
MD02G1006600 Malus domestica HOM05D002928 ORTHO05D003794 6.4e-17 90.1 44 95.5
MD15G1151700 Malus domestica HOM05D002928 ORTHO05D003794 6.4e-17 90.1 44 95.5
Manes.14G144400 Manihot esculenta HOM05D002928 ORTHO05D003794 6.4e-17 90.1 47 89.4
Nn2g12407 Nelumbo nucifera HOM05D002928 ORTHO05D003794 6.4e-17 90.1 47 89.4
Phvul.009G194700 Phaseolus vulgaris HOM05D002928 ORTHO05D003794 6.4e-17 90.1 47 89.4
Potri.006G183600 Populus trichocarpa HOM05D002928 ORTHO05D003794 6.4e-17 90.1 44 95.5
Potri.018G105900 Populus trichocarpa HOM05D002928 ORTHO05D003794 6.4e-17 90.1 47 89.4
Prupe.7G264100 Prunus persica HOM05D002928 ORTHO05D003794 6.4e-17 90.1 47 89.4
Rhsim01G0028300 Rhododendron simsii HOM05D002928 ORTHO05D003794 6.4e-17 90.1 47 89.4
RcHm_v2.0_Chr2g0085561 Rosa chinensis HOM05D002928 ORTHO05D003794 6.4e-17 90.1 47 89.4
Sabra06G0139500 Salix brachista HOM05D002928 ORTHO05D003794 6.4e-17 90.1 47 89.4
Sabra18G0090300 Salix brachista HOM05D002928 ORTHO05D003794 6.4e-17 90.1 47 89.4
TAR383G0178 Trochodendron aralioides HOM05D002928 ORTHO05D003794 6.4e-17 90.1 47 89.4
TAR625G1201 Trochodendron aralioides HOM05D002928 ORTHO05D003794 6.4e-17 90.1 47 89.4
unitig_60.g25522 Utricularia gibba HOM05D002928 ORTHO05D003794 6.4e-17 90.1 44 95.5
vmacro05439 Vaccinium macrocarpon HOM05D002928 ORTHO05D003794 6.4e-17 90.1 47 89.4
vmacro16797 Vaccinium macrocarpon HOM05D002928 ORTHO05D003794 6.4e-17 90.1 47 89.4
VMungo1309G0506 Vigna mungo HOM05D002928 ORTHO05D003794 6.4e-17 90.1 47 89.4
HanXRQChr06g0180611 Helianthus annuus HOM05D002928 ORTHO05D003794 8.3e-17 89.7 47 89.4
Oeu052208.1 Olea europaea HOM05D002928 ORTHO05D003794 8.3e-17 89.7 47 89.4
Aa31LG2G19920 Aethionema arabicum HOM05D002928 ORTHO05D003794 1.1e-16 89.4 44 93.2
AL7G21540 Arabidopsis lyrata HOM05D002928 ORTHO05D003794 1.1e-16 89.4 44 93.2
AT4G30600 Arabidopsis thaliana HOM05D002928 ORTHO05D003794 1.1e-16 89.4 44 93.2
BcaNung00569 Brassica carinata HOM05D002928 ORTHO05D003794 1.1e-16 89.4 44 93.2
BcaNung04564 Brassica carinata HOM05D002928 ORTHO05D003794 1.1e-16 89.4 44 93.2
A03p60120 Brassica napus HOM05D002928 ORTHO05D003794 1.1e-16 89.4 44 93.2
C07p58050 Brassica napus HOM05D002928 ORTHO05D003794 1.1e-16 89.4 44 93.2
BolC7t46263H Brassica oleracea HOM05D002928 ORTHO05D003794 1.1e-16 89.4 44 93.2
BraA03t15057Z Brassica rapa HOM05D002928 ORTHO05D003794 1.1e-16 89.4 44 93.2
CARHR238470 Cardamine hirsuta HOM05D002928 ORTHO05D003794 1.1e-16 89.4 44 93.2
CDE06G1463 Ceratophyllum demersum HOM05D002928 ORTHO05D003794 1.1e-16 89.4 44 93.2
Eucgr.C02497 Eucalyptus grandis HOM05D002928 ORTHO05D003794 1.1e-16 89.4 44 93.2
Eucgr.C02536 Eucalyptus grandis HOM05D002928 ORTHO05D003794 1.1e-16 89.4 44 93.2
Thhalv10024667m.g Eutrema salsugineum HOM05D002928 ORTHO05D003794 1.1e-16 89.4 44 93.2
PGR102G2877 Punica granatum HOM05D002928 ORTHO05D003794 1.1e-16 89.4 44 95.5
Sp7g28470 Schrenkiella parvula HOM05D002928 ORTHO05D003794 1.1e-16 89.4 44 93.2
THA.LOC104803542 Tarenaya hassleriana HOM05D002928 ORTHO05D003794 1.1e-16 89.4 44 93.2
THA.LOC104819994 Tarenaya hassleriana HOM05D002928 ORTHO05D003794 1.1e-16 89.4 44 93.2
Ah.03g147670 Amaranthus hybridus HOM05D002928 ORTHO05D003794 1.4e-16 89.0 44 95.5
arahy.Tifrunner.gnm1.ann1.AAXI8T Arachis hypogaea HOM05D002928 ORTHO05D003794 1.4e-16 89.0 44 93.2
arahy.Tifrunner.gnm1.ann1.V0HTQD Arachis hypogaea HOM05D002928 ORTHO05D003794 1.4e-16 89.0 44 93.2
FvH4_1g00830 Fragaria vesca HOM05D002928 ORTHO05D003794 1.4e-16 89.0 47 87.2
FvH4_2g11040 Fragaria vesca HOM05D002928 ORTHO05D003794 1.4e-16 89.0 47 87.2
FAN23G2032 Fragaria x ananassa HOM05D002928 ORTHO05D003794 1.4e-16 89.0 47 87.2
FAN24G1218 Fragaria x ananassa HOM05D002928 ORTHO05D003794 1.4e-16 89.0 47 87.2
FAN26G1266 Fragaria x ananassa HOM05D002928 ORTHO05D003794 1.4e-16 89.0 47 87.2
FAN28G2936 Fragaria x ananassa HOM05D002928 ORTHO05D003794 1.4e-16 89.0 47 87.2
Manes.06G034500 Manihot esculenta HOM05D002928 ORTHO05D003794 1.4e-16 89.0 47 87.2
PSO063G7436 Papaver somniferum HOM05D002928 ORTHO05D003794 1.4e-16 89.0 56 78.6
PSO339G1052 Papaver somniferum HOM05D002928 ORTHO05D003794 1.4e-16 89.0 56 78.6
PSO384G2120 Papaver somniferum HOM05D002928 ORTHO05D003794 1.4e-16 89.0 56 78.6
Cpa.g.sc46.162 Carica papaya HOM05D002928 ORTHO05D003794 1.9e-16 88.6 47 87.2
Ca_21132_v3 Cicer arietinum L. HOM05D002928 ORTHO05D003794 1.9e-16 88.6 47 87.2
Cc06_g14860 Coffea canephora HOM05D002928 ORTHO05D003794 1.9e-16 88.6 47 87.2
Psat0s2403g0040 Pisum sativum HOM05D002928 ORTHO05D003794 1.9e-16 88.6 47 87.2
ATR0115G002 Amborella trichopoda HOM05D002928 ORTHO05D003794 2.4e-16 88.2 44 93.2
COL.COLO4_22866 Corchorus olitorius HOM05D002928 ORTHO05D003794 2.4e-16 88.2 47 87.2
BcaC09g51851 Brassica carinata HOM05D002928 ORTHO05D003794 3.2e-16 87.8 44 93.2
C01p08330 Brassica napus HOM05D002928 ORTHO05D003794 3.2e-16 87.8 44 93.2
BolC1t00819H Brassica oleracea HOM05D002928 ORTHO05D003794 3.2e-16 87.8 44 93.2
BraA01t00707Z Brassica rapa HOM05D002928 ORTHO05D003794 3.2e-16 87.8 44 93.2
RcHm_v2.0_Chr7g0224901 Rosa chinensis HOM05D002928 ORTHO05D003794 3.2e-16 87.8 44 93.2
SMO367G0463 Selaginella moellendorffii HOM05D002928 ORTHO05D003794 3.2e-16 87.8 44 90.9
Thecc.09G029000 Theobroma cacao HOM05D002928 ORTHO05D003794 3.2e-16 87.8 47 87.2
Lalb_Chr13g0300841 Lupinus albus HOM05D002928 ORTHO05D003794 5.4e-16 87.0 47 85.1
QL02p068861 Quercus lobata HOM05D002928 ORTHO05D003794 5.4e-16 87.0 47 85.1
Hund04383 Selenicereus undatus HOM05D002928 ORTHO05D003794 7.0e-16 86.7 44 90.9
ATR0772G178 Amborella trichopoda HOM05D002928 ORTHO05D003794 9.2e-16 86.3 44 90.9
AUR62017854 Chenopodium quinoa HOM05D002928 ORTHO05D003794 9.2e-16 86.3 44 90.9
Peaxi162Scf01764g00002 Petunia axillaris HOM05D002928 ORTHO05D003794 9.2e-16 86.3 47 85.1
TPR.G24848 Trifolium pratense HOM05D002928 ORTHO05D003794 9.2e-16 86.3 47 85.1
EL10Ac6g15341 Beta vulgaris HOM05D002928 ORTHO05D003794 1.2e-15 85.9 44 90.9
Mapoly0062s0007 Marchantia polymorpha HOM05D002928 ORTHO05D003794 1.2e-15 85.9 44 88.6
Medtr4g130770 Medicago truncatula HOM05D002928 ORTHO05D003794 1.2e-15 85.9 47 83.0
Peaxi162Scf00643g00413 Petunia axillaris HOM05D002928 ORTHO05D003794 1.2e-15 85.9 47 83.0
HPP92_005048 Vanilla planifolia HOM05D002928 ORTHO05D003794 1.2e-15 85.9 42 95.2
HPP92_005065 Vanilla planifolia HOM05D002928 ORTHO05D003794 1.2e-15 85.9 42 95.2
A01p07640 Brassica napus HOM05D002928 ORTHO05D003794 1.6e-15 85.5 44 90.9
FAN20G1404 Fragaria x ananassa HOM05D002928 ORTHO05D003794 2.0e-15 85.1 47 83.0
Glyma.17G073300 Glycine max HOM05D002928 ORTHO05D003794 2.0e-15 85.1 47 85.1
SGA_v2.0_scaffold37G14892 Striga asiatica HOM05D002928 ORTHO05D003794 2.0e-15 85.1 47 85.1
Migut.J01351 Erythranthe guttata HOM05D002928 ORTHO05D003794 2.7e-15 84.7 47 85.1
VMungo1215G3047 Vigna mungo HOM05D002928 ORTHO05D003794 2.7e-15 84.7 60 66.7
SEGI_39303 Sequoiadendron giganteum HOM05D002928 ORTHO05D003794 3.5e-15 84.3 42 92.9
TWI32G1175 Tripterygium wilfordii HOM05D002928 ORTHO05D003794 3.5e-15 84.3 56 71.4
TWI34G1864 Tripterygium wilfordii HOM05D002928 ORTHO05D003794 3.5e-15 84.3 56 71.4
PSO591G0067 Papaver somniferum HOM05D002928 ORTHO05D003794 4.6e-15 84.0 56 75.0
AUR62003540 Chenopodium quinoa HOM05D002928 ORTHO05D003794 1.0e-14 82.8 44 86.4
Sc10g0008640 Simmondsia chinensis HOM05D002928 ORTHO05D003794 1.0e-14 82.8 47 78.7
Phvul.003G155500 Phaseolus vulgaris HOM05D002928 ORTHO05D003794 2.3e-14 81.6 47 80.9
AagrBONN_evm.TU.Sc2ySwM_344.2608 Anthoceros agrestis HOM05D002928 ORTHO05D003794 3.0e-14 81.3 44 81.8
Aqoxy1G00970 Aquilegia oxysepala HOM05D002928 ORTHO05D003794 3.0e-14 81.3 44 88.6
CiPaw.16G110200 Carya illinoinensis HOM05D002928 ORTHO05D003794 3.0e-14 81.3 41 92.7
CiPaw.16G110000 Carya illinoinensis HOM05D002928 ORTHO05D003794 6.6e-14 80.1 47 80.9
Hma1.2p1_1036F.1_g250545 Hydrangea macrophylla HOM05D002928 ORTHO05D003794 6.6e-14 80.1 47 85.1
QL02p093370 Quercus lobata HOM05D002928 ORTHO05D003794 1.5e-13 79.0 47 78.7
SGA_v2.0_scaffold23G10013 Striga asiatica HOM05D002928 ORTHO05D003794 7.3e-13 76.6 47 80.9
Pp3c19_22330 Physcomitrium patens HOM05D002928 ORTHO05D003794 1.6e-12 75.5 44 72.7
CiPaw.16G108700 Carya illinoinensis HOM05D002928 ORTHO05D003794 3.6e-12 74.3 47 78.7
Lj4g0021489 Lotus japonicus HOM05D002928 ORTHO05D003794 1.1e-11 72.8 47 78.7
SGA_v2.0_scaffold426G51505 Striga asiatica HOM05D002928 ORTHO05D003794 4.0e-11 70.9 47 76.6
Actinidia24380 Actinidia chinensis HOM05D002928 ORTHO05D003794 6.8e-11 70.1 44 79.5
Os08g0480100 Oryza sativa ssp. japonica HOM05D002928 ORTHO05D003794 2.6e-10 68.2 44 79.5
CiPaw.16G109700 Carya illinoinensis HOM05D002928 ORTHO05D034233 3.4e-10 67.8 37 86.5
Haze_08479 Corylus avellana HOM05D002928 ORTHO05D003794 3.4e-10 67.8 31 96.8
Zm00001eb000480 Zea mays HOM05D002928 ORTHO05D003794 4.4e-10 67.4 44 79.5
CBR_g18888 Chara braunii HOM05D002928 ORTHO05D003794 5.4e-08 60.5 44 68.2
MD02G1061600 Malus domestica HOM05D002928 ORTHO05D248122 7.8e-07 56.6 47 63.8


User provided reference genes

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