Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_19178 Corylus avellana HOM05D000287 ORTHO05D000319 1.1e-30 136.0 68 100.0
Haze_17866 Corylus avellana HOM05D000287 ORTHO05D000319 1.9e-14 82.0 42 92.9
Haze_01856 Corylus avellana HOM05D000287 ORTHO05D000319 2.7e-13 78.2 43 86.0
Haze_16195 Corylus avellana HOM05D000287 ORTHO05D000319 8.8e-12 73.2 44 79.5
Haze_19088 Corylus avellana HOM05D000287 ORTHO05D000319 8.8e-12 73.2 46 80.4
Haze_19175 Corylus avellana HOM05D000287 ORTHO05D000319 8.8e-12 73.2 44 81.8
QL11p007999 Quercus lobata HOM05D000287 ORTHO05D000319 1.2e-11 72.8 44 75.0
QL11p008025 Quercus lobata HOM05D000287 ORTHO05D000319 1.7e-10 68.9 44 70.5
CAN.G270.16 Capsicum annuum HOM05D000287 ORTHO05D000319 4.1e-09 64.3 44 65.9
Haze_19029 Corylus avellana HOM05D000287 ORTHO05D000319 1.2e-08 62.8 36 83.3
Solyc11g056670.2 Solanum lycopersicum HOM05D000287 ORTHO05D000319 1.2e-08 62.8 44 59.1
Sopen11g023450 Solanum pennellii HOM05D000287 ORTHO05D000319 1.2e-08 62.8 44 59.1
PGSC0003DMG400022059 Solanum tuberosum HOM05D000287 ORTHO05D000319 1.2e-08 62.8 44 59.1
Manes.03G000200 Manihot esculenta HOM05D000287 ORTHO05D000319 1.6e-08 62.4 44 59.1
Migut.H01042 Erythranthe guttata HOM05D000287 ORTHO05D000319 2.7e-08 61.6 44 56.8
TAR625G0705 Trochodendron aralioides HOM05D000287 ORTHO05D000319 2.7e-08 61.6 42 61.9
Nn5g27047 Nelumbo nucifera HOM05D000287 ORTHO05D000319 3.5e-08 61.2 44 59.1
Potri.006G085500 Populus trichocarpa HOM05D000287 ORTHO05D000319 3.5e-08 61.2 44 59.1
PGSC0003DMG400014755 Solanum tuberosum HOM05D000287 ORTHO05D000319 4.5e-08 60.8 44 59.1
Atru.chr3.4113 Acer truncatum HOM05D000287 ORTHO05D000319 5.9e-08 60.5 44 56.8
Actinidia25731 Actinidia chinensis HOM05D000287 ORTHO05D000319 5.9e-08 60.5 44 59.1
AUR62027979 Chenopodium quinoa HOM05D000287 ORTHO05D000319 5.9e-08 60.5 44 59.1
Dinv26487 Davidia involucrata HOM05D000287 ORTHO05D000319 5.9e-08 60.5 44 56.8
QL08p016784 Quercus lobata HOM05D000287 ORTHO05D000319 5.9e-08 60.5 44 54.5
Thecc.09G000600 Theobroma cacao HOM05D000287 ORTHO05D000319 5.9e-08 60.5 44 59.1
EL10Ac2g03618 Beta vulgaris HOM05D000287 ORTHO05D000319 7.7e-08 60.1 42 59.5
Migut.J00847 Erythranthe guttata HOM05D000287 ORTHO05D000319 7.7e-08 60.1 44 52.3
Nitab4.5_0000253g0060 Nicotiana tabacum HOM05D000287 ORTHO05D000319 7.7e-08 60.1 44 59.1
Peaxi162Scf00005g01017 Petunia axillaris HOM05D000287 ORTHO05D000319 7.7e-08 60.1 44 56.8
PGR044G1009 Punica granatum HOM05D000287 ORTHO05D000319 7.7e-08 60.1 42 59.5
CANSAT80G0287 Cannabis sativa HOM05D000287 ORTHO05D000319 1.0e-07 59.7 44 59.1
CAN.G577.7 Capsicum annuum HOM05D000287 ORTHO05D000319 1.0e-07 59.7 44 56.8
Aqoxy5G03838 Aquilegia oxysepala HOM05D000287 ORTHO05D000319 1.3e-07 59.3 42 57.1
COL.COLO4_38460 Corchorus olitorius HOM05D000287 ORTHO05D000319 1.3e-07 59.3 42 57.1
Nitab4.5_0006538g0100 Nicotiana tabacum HOM05D000287 ORTHO05D000319 1.3e-07 59.3 44 56.8
GSVIVG01032230001 Vitis vinifera HOM05D000287 ORTHO05D000319 1.3e-07 59.3 44 54.5
Ciclev10030148m.g Citrus clementina HOM05D000287 ORTHO05D000319 1.7e-07 58.9 43 53.5
Manes.08G156600 Manihot esculenta HOM05D000287 ORTHO05D000319 1.7e-07 58.9 44 54.5
QL05p071789 Quercus lobata HOM05D000287 ORTHO05D000319 1.7e-07 58.9 44 52.3
QL05p084300 Quercus lobata HOM05D000287 ORTHO05D000319 1.7e-07 58.9 48 52.1
PGSC0003DMG400001251 Solanum tuberosum HOM05D000287 ORTHO05D000319 1.7e-07 58.9 44 54.5
TAR383G0206 Trochodendron aralioides HOM05D000287 ORTHO05D000319 1.7e-07 58.9 42 61.9
Aqoxy7G02539 Aquilegia oxysepala HOM05D000287 ORTHO05D000319 2.3e-07 58.5 42 57.1
Dinv37486 Davidia involucrata HOM05D000287 ORTHO05D000319 2.3e-07 58.5 44 54.5
Glyma.08G026900 Glycine max HOM05D000287 ORTHO05D000319 2.3e-07 58.5 44 54.5
Lj4g0001626 Lotus japonicus HOM05D000287 ORTHO05D000319 2.3e-07 58.5 42 57.1
QL05p085702 Quercus lobata HOM05D000287 ORTHO05D000319 2.3e-07 58.5 44 52.3
CSS0001973 Camellia sinensis var. sinensis HOM05D000287 ORTHO05D000319 2.9e-07 58.2 44 54.5
CSS0013028 Camellia sinensis var. sinensis HOM05D000287 ORTHO05D000319 2.9e-07 58.2 44 54.5
Cpa.g.sc91.63 Carica papaya HOM05D000287 ORTHO05D000319 2.9e-07 58.2 44 54.5
Dinv22100 Davidia involucrata HOM05D000287 ORTHO05D000319 2.9e-07 58.2 42 57.1
Migut.J00850 Erythranthe guttata HOM05D000287 ORTHO05D000319 2.9e-07 58.2 44 52.3
Lalb_Chr16g0390821 Lupinus albus HOM05D000287 ORTHO05D000319 2.9e-07 58.2 48 50.0
Nn5g26979 Nelumbo nucifera HOM05D000287 ORTHO05D000319 2.9e-07 58.2 42 59.5
Potri.007G002400 Populus trichocarpa HOM05D000287 ORTHO05D000319 2.9e-07 58.2 44 54.5
TAR636G0154 Trochodendron aralioides HOM05D000287 ORTHO05D000319 2.9e-07 58.2 42 57.1
TAR636G0895 Trochodendron aralioides HOM05D000287 ORTHO05D000319 2.9e-07 58.2 42 57.1
TAR636G3185 Trochodendron aralioides HOM05D000287 ORTHO05D000319 2.9e-07 58.2 42 57.1
GSVIVG01032283001 Vitis vinifera HOM05D000287 ORTHO05D000319 2.9e-07 58.2 44 54.5
Duzib192G0065 Durio zibethinus HOM05D000287 ORTHO05D000319 3.8e-07 57.8 44 54.5
Duzib192G0751 Durio zibethinus HOM05D000287 ORTHO05D000319 3.8e-07 57.8 44 54.5
Gohir.D05G116200 Gossypium hirsutum HOM05D000287 ORTHO05D000319 3.8e-07 57.8 42 54.8
Gorai.009G120200 Gossypium raimondii HOM05D000287 ORTHO05D000319 3.8e-07 57.8 42 54.8
Nn8g41155 Nelumbo nucifera HOM05D000287 ORTHO05D000319 3.8e-07 57.8 44 54.5
Nn8g41167 Nelumbo nucifera HOM05D000287 ORTHO05D000319 3.8e-07 57.8 44 54.5
Peaxi162Scf00005g00118 Petunia axillaris HOM05D000287 ORTHO05D000319 3.8e-07 57.8 44 59.1
GSVIVG01035577001 Vitis vinifera HOM05D000287 ORTHO05D000319 3.8e-07 57.8 42 59.5
MSTRG.26514 Avicennia marina HOM05D000287 ORTHO05D000319 5.0e-07 57.4 44 54.5
Cfa020762 Carpinus fangiana HOM05D000287 ORTHO05D000319 5.0e-07 57.4 42 57.1
Haze_19083 Corylus avellana HOM05D000287 ORTHO05D000319 5.0e-07 57.4 42 57.1
Sabra07G0001700 Salix brachista HOM05D000287 ORTHO05D000319 5.0e-07 57.4 44 52.3
Sabra18G0126000 Salix brachista HOM05D000287 ORTHO05D000319 5.0e-07 57.4 42 57.1
Sabra18G0129800 Salix brachista HOM05D000287 ORTHO05D000319 5.0e-07 57.4 42 57.1
TWI63G0630 Tripterygium wilfordii HOM05D000287 ORTHO05D000319 5.0e-07 57.4 42 54.8
TAR383G0654 Trochodendron aralioides HOM05D000287 ORTHO05D000319 5.0e-07 57.4 42 59.5
Aqoxy4G01352 Aquilegia oxysepala HOM05D000287 ORTHO05D000319 6.6e-07 57.0 42 54.8
Aqoxy7G02581 Aquilegia oxysepala HOM05D000287 ORTHO05D000319 6.6e-07 57.0 42 52.4
EL10Ac7g18120 Beta vulgaris HOM05D000287 ORTHO05D000319 6.6e-07 57.0 42 57.1
AUR62020733 Chenopodium quinoa HOM05D000287 ORTHO05D000319 6.6e-07 57.0 44 54.5
Eucgr.C02162 Eucalyptus grandis HOM05D000287 ORTHO05D000319 6.6e-07 57.0 44 54.5
MD04G1002500 Malus domestica HOM05D000287 ORTHO05D000319 6.6e-07 57.0 42 57.1
MD13G1284800 Malus domestica HOM05D000287 ORTHO05D000319 6.6e-07 57.0 42 57.1
Potri.018G133901 Populus trichocarpa HOM05D000287 ORTHO05D000319 6.6e-07 57.0 42 59.5
Potri.018G149300 Populus trichocarpa HOM05D000287 ORTHO05D000319 6.6e-07 57.0 42 54.8
Prupe.1G002500 Prunus persica HOM05D000287 ORTHO05D000319 6.6e-07 57.0 42 57.1
Sabra18G0126100 Salix brachista HOM05D000287 ORTHO05D000319 6.6e-07 57.0 42 57.1
Sabra18G0129900 Salix brachista HOM05D000287 ORTHO05D000319 6.6e-07 57.0 42 57.1
arahy.Tifrunner.gnm1.ann1.1WJI3I Arachis hypogaea HOM05D000287 ORTHO05D000319 8.6e-07 56.6 42 54.8
arahy.Tifrunner.gnm1.ann1.WIE6UT Arachis hypogaea HOM05D000287 ORTHO05D000319 8.6e-07 56.6 42 54.8
Duzib192G0053 Durio zibethinus HOM05D000287 ORTHO05D000319 8.6e-07 56.6 43 55.8
Glyma.05G220500 Glycine max HOM05D000287 ORTHO05D000319 8.6e-07 56.6 44 52.3
Lj5C799T6 Lonicera japonica HOM05D000287 ORTHO05D000319 8.6e-07 56.6 44 54.5
FvH4_4g00250 Fragaria vesca HOM05D000287 ORTHO05D000319 1.1e-06 56.2 42 54.8
FvH4_4g01400 Fragaria vesca HOM05D000287 ORTHO05D000319 1.1e-06 56.2 42 54.8
FAN12G2761 Fragaria x ananassa HOM05D000287 ORTHO05D000319 1.1e-06 56.2 42 54.8
FAN17G1160 Fragaria x ananassa HOM05D000287 ORTHO05D000319 1.1e-06 56.2 42 54.8
FAN22G2079 Fragaria x ananassa HOM05D000287 ORTHO05D000319 1.1e-06 56.2 42 54.8
FAN22G2098 Fragaria x ananassa HOM05D000287 ORTHO05D000319 1.1e-06 56.2 42 54.8
Gohir.A05G115800 Gossypium hirsutum HOM05D000287 ORTHO05D000319 1.1e-06 56.2 55 47.3
Phvul.002G302100 Phaseolus vulgaris HOM05D000287 ORTHO05D000319 1.1e-06 56.2 44 52.3
QL04p088385 Quercus lobata HOM05D000287 ORTHO05D000319 1.1e-06 56.2 40 60.0
Rhsim04G0124400 Rhododendron simsii HOM05D000287 ORTHO05D000319 1.1e-06 56.2 44 54.5
RcHm_v2.0_Chr4g0384991 Rosa chinensis HOM05D000287 ORTHO05D000319 1.1e-06 56.2 42 54.8
Hund03219 Selenicereus undatus HOM05D000287 ORTHO05D000319 1.1e-06 56.2 42 52.4
Thecc.09G205000 Theobroma cacao HOM05D000287 ORTHO05D000319 1.1e-06 56.2 42 54.8
VMungo0251G0123 Vigna mungo HOM05D000287 ORTHO05D000319 1.1e-06 56.2 42 54.8
Duzib235G0797 Durio zibethinus HOM05D000287 ORTHO05D000319 1.5e-06 55.8 43 53.5
Migut.L01924 Erythranthe guttata HOM05D000287 ORTHO05D000319 1.5e-06 55.8 49 57.1
Lj5C799G2 Lonicera japonica HOM05D000287 ORTHO05D000319 1.5e-06 55.8 42 57.1
Medtr8g100135 Medicago truncatula HOM05D000287 ORTHO05D000319 1.5e-06 55.8 44 52.3
QL11p007332 Quercus lobata HOM05D000287 ORTHO05D000319 1.5e-06 55.8 42 54.8
MSTRG.19404 Avicennia marina HOM05D000287 ORTHO05D000319 1.9e-06 55.5 43 51.2
Ca_17442_v3 Cicer arietinum L. HOM05D000287 ORTHO05D000319 1.9e-06 55.5 44 50.0
Dinv22099 Davidia involucrata HOM05D000287 ORTHO05D000319 1.9e-06 55.5 42 54.8
Gohir.A08G014900 Gossypium hirsutum HOM05D000287 ORTHO05D000319 1.9e-06 55.5 39 59.0
Gohir.D08G025500 Gossypium hirsutum HOM05D000287 ORTHO05D000319 1.9e-06 55.5 39 59.0
Gorai.004G020800 Gossypium raimondii HOM05D000287 ORTHO05D000319 1.9e-06 55.5 39 59.0
PSO423G0255 Papaver somniferum HOM05D000287 ORTHO05D000319 1.9e-06 55.5 42 59.5
Thecc.06G052700 Theobroma cacao HOM05D000287 ORTHO05D000319 1.9e-06 55.5 42 54.8
TPR.G25479 Trifolium pratense HOM05D000287 ORTHO05D000319 1.9e-06 55.5 44 50.0
COL.COLO4_38461 Corchorus olitorius HOM05D000287 ORTHO05D000319 2.5e-06 55.1 43 53.5
Hma1.2p1_0263F.1_g105550 Hydrangea macrophylla HOM05D000287 ORTHO05D000319 2.5e-06 55.1 42 54.8
Lj5A798G50 Lonicera japonica HOM05D000287 ORTHO05D000319 2.5e-06 55.1 42 54.8
Psat7g020800 Pisum sativum HOM05D000287 ORTHO05D000319 2.5e-06 55.1 44 52.3
Thecc.06G052900 Theobroma cacao HOM05D000287 ORTHO05D000319 2.5e-06 55.1 42 54.8
AUR62001317 Chenopodium quinoa HOM05D000287 ORTHO05D000319 3.3e-06 54.7 45 48.9
Manes.02G223800 Manihot esculenta HOM05D000287 ORTHO05D000319 3.3e-06 54.7 49 53.1
ClCG03G011800 Citrullus lanatus HOM05D000287 ORTHO05D000319 4.2e-06 54.3 42 54.8
Dinv12622 Davidia involucrata HOM05D000287 ORTHO05D000319 4.2e-06 54.3 44 52.3
Lj5A798T57 Lonicera japonica HOM05D000287 ORTHO05D000319 4.2e-06 54.3 42 54.8
Lj5C810T1 Lonicera japonica HOM05D000287 ORTHO05D000319 4.2e-06 54.3 42 54.8
Thecc.08G193000 Theobroma cacao HOM05D000287 ORTHO05D000319 4.2e-06 54.3 44 50.0
COL.COLO4_24642 Corchorus olitorius HOM05D000287 ORTHO05D000319 5.5e-06 53.9 62 45.2
COL.COLO4_06608 Corchorus olitorius HOM05D000287 ORTHO05D000319 7.2e-06 53.5 42 50.0
COL.COLO4_38456 Corchorus olitorius HOM05D000287 ORTHO05D000319 7.2e-06 53.5 42 54.8
Nitab4.5_0002222g0040 Nicotiana tabacum HOM05D000287 ORTHO05D000319 7.2e-06 53.5 36 63.9
Potri.018G134000 Populus trichocarpa HOM05D000287 ORTHO05D000319 7.2e-06 53.5 42 50.0
Thecc.08G193100 Theobroma cacao HOM05D000287 ORTHO05D000319 7.2e-06 53.5 44 50.0
arahy.Tifrunner.gnm1.ann1.MR6WYG Arachis hypogaea HOM05D000287 ORTHO05D000319 9.5e-06 53.1 43 48.8
CSS0013211 Camellia sinensis var. sinensis HOM05D000287 ORTHO05D000319 9.5e-06 53.1 42 54.8
Lj4A508T27 Lonicera japonica HOM05D000287 ORTHO05D000319 9.5e-06 53.1 44 45.5
Lj4A509T44 Lonicera japonica HOM05D000287 ORTHO05D000319 9.5e-06 53.1 44 45.5
Lj4C517T1 Lonicera japonica HOM05D000287 ORTHO05D000319 9.5e-06 53.1 44 45.5
Lj5A801G35 Lonicera japonica HOM05D000287 ORTHO05D000319 9.5e-06 53.1 42 52.4
Lj5A809T66 Lonicera japonica HOM05D000287 ORTHO05D000319 9.5e-06 53.1 42 52.4
PSO063G2013 Papaver somniferum HOM05D000287 ORTHO05D000319 9.5e-06 53.1 42 54.8
PSO170G5496 Papaver somniferum HOM05D000287 ORTHO05D000319 9.5e-06 53.1 42 54.8
PGR142G3539 Punica granatum HOM05D000287 ORTHO05D000319 9.5e-06 53.1 44 52.3
THA.LOC104808921 Tarenaya hassleriana HOM05D000287 ORTHO05D000319 9.5e-06 53.1 48 52.1


User provided reference genes

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