Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_19139 Corylus avellana HOM05D006256 ORTHO05D007833 3.5e-80 301.6 155 100.0
Cfa020783 Carpinus fangiana HOM05D006256 ORTHO05D007833 6.1e-77 290.8 155 97.4
CiPaw.15G164300 Carya illinoinensis HOM05D006256 ORTHO05D007833 4.7e-53 211.5 155 78.1
CiPaw.16G106600 Carya illinoinensis HOM05D006256 ORTHO05D007833 3.5e-48 195.3 155 74.2
CANSAT11G0095 Cannabis sativa HOM05D006256 ORTHO05D007833 7.3e-46 187.6 151 72.2
Sed0025015 Sechium edule HOM05D006256 ORTHO05D007833 6.9e-44 181.0 155 67.7
ClCG06G012650 Citrullus lanatus HOM05D006256 ORTHO05D007833 3.4e-43 178.7 155 67.7
Atru.chr7.353 Acer truncatum HOM05D006256 ORTHO05D007833 4.4e-43 178.3 156 67.9
MELO3C010199.2 Cucumis melo HOM05D006256 ORTHO05D007833 1.3e-42 176.8 155 68.4
Nn2g12458 Nelumbo nucifera HOM05D006256 ORTHO05D007833 4.9e-42 174.9 156 66.0
Manes.14G113600 Manihot esculenta HOM05D006256 ORTHO05D007833 6.4e-42 174.5 154 69.5
Duzib187G1001 Durio zibethinus HOM05D006256 ORTHO05D007833 1.9e-41 172.9 150 69.3
arahy.Tifrunner.gnm1.ann1.6DRS7R Arachis hypogaea HOM05D006256 ORTHO05D007833 4.2e-41 171.8 152 67.8
TAR383G0166 Trochodendron aralioides HOM05D006256 ORTHO05D007833 4.2e-41 171.8 133 72.9
TAR626G0939 Trochodendron aralioides HOM05D006256 ORTHO05D007833 4.2e-41 171.8 124 75.0
CsaV3_1G029200 Cucumis sativus L. HOM05D006256 ORTHO05D007833 5.4e-41 171.4 156 66.7
COL.COLO4_05401 Corchorus olitorius HOM05D006256 ORTHO05D007833 1.2e-40 170.2 134 73.1
arahy.Tifrunner.gnm1.ann1.RJ4A7B Arachis hypogaea HOM05D006256 ORTHO05D007833 2.1e-40 169.5 152 67.1
FAN07G0991 Fragaria x ananassa HOM05D006256 ORTHO05D007833 2.1e-40 169.5 154 67.5
Eucgr.C02515 Eucalyptus grandis HOM05D006256 ORTHO05D007833 2.7e-40 169.1 154 67.5
Prupe.1G102100 Prunus persica HOM05D006256 ORTHO05D007833 3.5e-40 168.7 125 75.2
Thecc.09G154100 Theobroma cacao HOM05D006256 ORTHO05D007833 3.5e-40 168.7 150 67.3
Cfa020782 Carpinus fangiana HOM05D006256 ORTHO05D007833 7.8e-40 167.5 92 94.6
FAN17G2907 Fragaria x ananassa HOM05D006256 ORTHO05D007833 1.0e-39 167.2 154 66.9
FAN17G2911 Fragaria x ananassa HOM05D006256 ORTHO05D007833 1.0e-39 167.2 154 66.9
Potri.018G102700 Populus trichocarpa HOM05D006256 ORTHO05D007833 1.7e-39 166.4 152 70.4
RcHm_v2.0_Chr4g0405501 Rosa chinensis HOM05D006256 ORTHO05D007833 3.0e-39 165.6 154 65.6
Ciclev10009792m.g Citrus clementina HOM05D006256 ORTHO05D007833 8.7e-39 164.1 149 64.4
Cpa.g.sc199.16 Carica papaya HOM05D006256 ORTHO05D007833 1.1e-38 163.7 154 66.2
PGR102G0560 Punica granatum HOM05D006256 ORTHO05D007833 1.1e-38 163.7 159 64.2
TWI32G1056 Tripterygium wilfordii HOM05D006256 ORTHO05D007833 1.5e-38 163.3 142 65.5
Eucgr.L01548 Eucalyptus grandis HOM05D006256 ORTHO05D007833 1.9e-38 162.9 153 64.7
Dinv43283 Davidia involucrata HOM05D006256 ORTHO05D007833 2.5e-38 162.5 155 63.9
FAN22G0392 Fragaria x ananassa HOM05D006256 ORTHO05D007833 2.5e-38 162.5 151 66.9
Glyma.02G206700 Glycine max HOM05D006256 ORTHO05D007833 2.5e-38 162.5 131 71.8
A04p18400 Brassica napus HOM05D006256 ORTHO05D007833 3.3e-38 162.2 151 64.9
BraA04t17452Z Brassica rapa HOM05D006256 ORTHO05D007833 3.3e-38 162.2 151 64.9
BolC4t26923H Brassica oleracea HOM05D006256 ORTHO05D007833 4.3e-38 161.8 151 64.2
Lj4g0007171 Lotus japonicus HOM05D006256 ORTHO05D007833 4.3e-38 161.8 153 63.4
VMungo1215G1943 Vigna mungo HOM05D006256 ORTHO05D007833 1.6e-37 159.8 127 74.0
Sabra18G0088200 Salix brachista HOM05D006256 ORTHO05D007833 2.1e-37 159.5 130 70.0
C04p53670 Brassica napus HOM05D006256 ORTHO05D007833 2.8e-37 159.1 151 63.6
FvH4_4g09690 Fragaria vesca HOM05D006256 ORTHO05D007833 3.6e-37 158.7 148 65.5
Sp4g02990 Schrenkiella parvula HOM05D006256 ORTHO05D007833 4.8e-37 158.3 139 68.3
Gohir.A08G087800 Gossypium hirsutum HOM05D006256 ORTHO05D007833 8.1e-37 157.5 134 69.4
Phvul.003G153700 Phaseolus vulgaris HOM05D006256 ORTHO05D007833 1.1e-36 157.1 134 71.6
A09p56610 Brassica napus HOM05D006256 ORTHO05D007833 1.8e-36 156.4 154 61.7
BraA09t41052Z Brassica rapa HOM05D006256 ORTHO05D007833 1.8e-36 156.4 154 61.7
CSS0035436 Camellia sinensis var. sinensis HOM05D006256 ORTHO05D007833 1.8e-36 156.4 152 61.8
Gorai.004G106500 Gossypium raimondii HOM05D006256 ORTHO05D007833 1.8e-36 156.4 142 65.5
Gohir.D08G098900 Gossypium hirsutum HOM05D006256 ORTHO05D007833 2.4e-36 156.0 134 68.7
BcaC07g40961 Brassica carinata HOM05D006256 ORTHO05D007833 3.1e-36 155.6 154 61.7
MBI15_g35737_MAGBIO Magnolia biondii HOM05D006256 ORTHO05D007833 3.1e-36 155.6 153 61.4
Glyma.17G071200 Glycine max HOM05D006256 ORTHO05D007833 5.3e-36 154.8 116 76.7
C08p39560 Brassica napus HOM05D006256 ORTHO05D007833 6.9e-36 154.5 153 61.4
BolC8t51529H Brassica oleracea HOM05D006256 ORTHO05D007833 6.9e-36 154.5 153 61.4
Hma1.2p1_1084F.1_g255300 Hydrangea macrophylla HOM05D006256 ORTHO05D007833 1.2e-35 153.7 155 58.7
Actinidia38660 Actinidia chinensis HOM05D006256 ORTHO05D007833 1.5e-35 153.3 148 59.5
MD04G1052200 Malus domestica HOM05D006256 ORTHO05D007833 2.6e-35 152.5 155 64.5
Medtr4g130300 Medicago truncatula HOM05D006256 ORTHO05D007833 5.8e-35 151.4 154 63.0
Thhalv10000362m.g Eutrema salsugineum HOM05D006256 ORTHO05D007833 9.9e-35 150.6 139 65.5
THA.LOC104803911 Tarenaya hassleriana HOM05D006256 ORTHO05D007833 1.3e-34 150.2 157 62.4
Aa31LG7G12680 Aethionema arabicum HOM05D006256 ORTHO05D007833 1.7e-34 149.8 144 63.2
CDE02G1547 Ceratophyllum demersum HOM05D006256 ORTHO05D007833 1.7e-34 149.8 150 60.7
CARHR118260 Cardamine hirsuta HOM05D006256 ORTHO05D007833 3.8e-34 148.7 156 60.3
AL4G14180 Arabidopsis lyrata HOM05D006256 ORTHO05D007833 4.9e-34 148.3 154 60.4
Psat7g006560 Pisum sativum HOM05D006256 ORTHO05D007833 6.4e-34 147.9 154 62.3
Carub.0004s0326 Capsella rubella HOM05D006256 ORTHO05D007833 8.4e-34 147.5 154 59.7
AT2G24090 Arabidopsis thaliana HOM05D006256 ORTHO05D007833 1.9e-33 146.4 154 60.4
CDE05G2121 Ceratophyllum demersum HOM05D006256 ORTHO05D007833 1.9e-33 146.4 113 70.8
vmacro06052 Vaccinium macrocarpon HOM05D006256 ORTHO05D007833 9.3e-33 144.1 152 57.2
Aqoxy7G03320 Aquilegia oxysepala HOM05D006256 ORTHO05D007833 2.1e-32 142.9 155 60.0
AUR62025373 Chenopodium quinoa HOM05D006256 ORTHO05D007833 2.1e-32 142.9 154 57.1
Oeu010284.1 Olea europaea HOM05D006256 ORTHO05D007833 6.0e-32 141.4 153 55.6
MSTRG.10713 Avicennia marina HOM05D006256 ORTHO05D007833 7.9e-32 141.0 147 58.5
EL10Ac8g18906 Beta vulgaris HOM05D006256 ORTHO05D007833 7.9e-32 141.0 160 58.1
QL02p094215 Quercus lobata HOM05D006256 ORTHO05D007833 7.9e-32 141.0 129 68.2
SalBow1G2070 Salvia bowleyana HOM05D006256 ORTHO05D007833 1.8e-31 139.8 151 56.3
Cc06_g14490 Coffea canephora HOM05D006256 ORTHO05D007833 2.3e-31 139.4 153 56.9
HanXRQChr12g0357751 Helianthus annuus HOM05D006256 ORTHO05D007833 2.3e-31 139.4 136 60.3
PSO170G3639 Papaver somniferum HOM05D006256 ORTHO05D007833 2.3e-31 139.4 160 57.5
AUR62028378 Chenopodium quinoa HOM05D006256 ORTHO05D007833 1.9e-30 136.3 151 56.3
PSO063G2398 Papaver somniferum HOM05D006256 ORTHO05D007833 1.9e-30 136.3 117 67.5
Gohir.A04G058552 Gossypium hirsutum HOM05D006256 ORTHO05D007833 3.3e-30 135.6 136 61.8
Lalb_Chr13g0300681 Lupinus albus HOM05D006256 ORTHO05D007833 5.6e-30 134.8 153 56.9
ECA234G3762 Erigeron canadensis HOM05D006256 ORTHO05D007833 1.3e-29 133.7 141 58.2
Migut.J01392 Erythranthe guttata HOM05D006256 ORTHO05D007833 1.3e-29 133.7 151 57.6
Nitab4.5_0001036g0150 Nicotiana tabacum HOM05D006256 ORTHO05D007833 1.3e-29 133.7 134 57.5
Nitab4.5_0006744g0050 Nicotiana tabacum HOM05D006256 ORTHO05D007833 1.6e-29 133.3 134 56.7
Hund08959 Selenicereus undatus HOM05D006256 ORTHO05D007833 2.8e-29 132.5 157 55.4
Migut.K00301 Erythranthe guttata HOM05D006256 ORTHO05D007833 3.7e-29 132.1 111 64.9
SGA_v2.0_scaffold222G42778 Striga asiatica HOM05D006256 ORTHO05D007833 3.7e-29 132.1 152 55.3
HanXRQChr10g0307761 Helianthus annuus HOM05D006256 ORTHO05D007833 6.2e-29 131.3 137 59.1
Peaxi162Scf00563g00414 Petunia axillaris HOM05D006256 ORTHO05D007833 8.1e-29 131.0 134 56.7
Lsat_1_v5_gn_5_88481 Lactuca sativa HOM05D006256 ORTHO05D007833 1.4e-28 130.2 139 56.8
CSS0023303 Camellia sinensis var. sinensis HOM05D006256 ORTHO05D007833 1.2e-27 127.1 98 71.4
HPP92_010352 Vanilla planifolia HOM05D006256 ORTHO05D007833 1.2e-27 127.1 150 54.0
SEGI_40166 Sequoiadendron giganteum HOM05D006256 ORTHO05D007833 1.5e-27 126.7 113 64.6
PGSC0003DMG400011211 Solanum tuberosum HOM05D006256 ORTHO05D007833 2.0e-27 126.3 132 56.8
Zm00001eb386680 Zea mays HOM05D006256 ORTHO05D007833 2.0e-27 126.3 109 67.0
Os06g0647100 Oryza sativa ssp. japonica HOM05D006256 ORTHO05D007833 2.6e-27 125.9 110 64.5
Solyc07g006000.3 Solanum lycopersicum HOM05D006256 ORTHO05D007833 2.6e-27 125.9 132 56.8
Sopen07g002140 Solanum pennellii HOM05D006256 ORTHO05D007833 2.6e-27 125.9 132 56.8
Dinv42817 Davidia involucrata HOM05D006256 ORTHO05D007833 5.8e-27 124.8 129 61.2
GSVIVG01012574001 Vitis vinifera HOM05D006256 ORTHO05D007833 1.7e-26 123.2 70 90.0
GSVIVG01012561001 Vitis vinifera HOM05D006256 ORTHO05D007833 4.9e-26 121.7 70 88.6
MBI15_g42789_MAGBIO Magnolia biondii HOM05D006256 ORTHO05D007833 1.9e-25 119.8 128 54.7
BcaC02g08498 Brassica carinata HOM05D006256 ORTHO05D007833 2.5e-25 119.4 151 52.3
unitig_748.g7194 Utricularia gibba HOM05D006256 ORTHO05D007833 2.1e-24 116.3 80 75.0
ATR0580G126 Amborella trichopoda HOM05D006256 ORTHO05D007833 6.7e-23 111.3 116 60.3
Actinidia33300 Actinidia chinensis HOM05D006256 ORTHO05D007833 2.5e-22 109.4 143 49.7
TPR.G24835 Trifolium pratense HOM05D006256 ORTHO05D007833 2.6e-19 99.4 129 53.5
SMO164G0197 Selaginella moellendorffii HOM05D006256 ORTHO05D007833 3.8e-18 95.5 133 45.1
Mapoly0027s0042 Marchantia polymorpha HOM05D006256 ORTHO05D007833 5.5e-17 91.7 67 73.1
Rhsim03G0259400 Rhododendron simsii HOM05D006256 ORTHO05D007833 5.5e-17 91.7 86 60.5
Ah.09g228670 Amaranthus hybridus HOM05D006256 ORTHO05D007833 9.3e-17 90.9 231 35.5
CBR_g46223 Chara braunii HOM05D006256 ORTHO05D007833 9.3e-17 90.9 76 63.2
Pp3c22_13420 Physcomitrium patens HOM05D006256 ORTHO05D007833 1.3e-15 87.0 105 51.4
CAN.G1190.22 Capsicum annuum HOM05D006256 ORTHO05D007833 2.3e-15 86.3 109 54.1
CSS0026373 Camellia sinensis var. sinensis HOM05D006256 ORTHO05D007833 1.9e-14 83.2 111 49.5
SGA_v2.0_scaffold12G06024 Striga asiatica HOM05D006256 ORTHO05D007833 3.8e-10 68.9 93 47.3
Pp3c21_8680 Physcomitrium patens HOM05D006256 ORTHO05D007833 1.4e-09 67.0 61 60.7
Sed0004136 Sechium edule HOM05D006256 ORTHO05D007833 3.6e-08 62.4 92 46.7
Pp3c21_8670 Physcomitrium patens HOM05D004684 ORTHO05D006904 6.1e-08 61.6 90 46.7
PRCOL_00001020 Prasinoderma coloniale HOM05D006256 ORTHO05D007833 5.1e-07 58.5 67 50.7
Zm00001eb000270 Zea mays HOM05D006256 ORTHO05D007833 1.5e-06 57.0 48 70.8
MCO09G536 Micromonas commoda HOM05D006256 ORTHO05D007833 7.4e-06 54.7 90 35.6


User provided reference genes

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