Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_19128 Corylus avellana HOM05D007659 ORTHO05D009227 1.3e-58 229.6 117 100.0
Cfa019408 Carpinus fangiana HOM05D007659 ORTHO05D009227 2.1e-53 212.2 117 92.3
Haze_19136 Corylus avellana HOM05D007659 ORTHO05D009227 5.2e-52 207.6 105 100.0
Haze_19129 Corylus avellana HOM05D007659 ORTHO05D009227 1.1e-49 199.9 107 96.3
Haze_19124 Corylus avellana HOM05D007659 ORTHO05D009227 1.8e-49 199.1 105 96.2
Haze_19127 Corylus avellana HOM05D007659 ORTHO05D009227 2.7e-48 195.3 117 85.5
Haze_19137 Corylus avellana HOM05D007659 ORTHO05D009227 5.9e-48 194.1 110 90.0
QL02p094226 Quercus lobata HOM05D007659 ORTHO05D009227 2.3e-36 155.6 119 68.9
Haze_27708 Corylus avellana HOM05D007659 ORTHO05D009227 4.0e-36 154.8 88 88.6
Dinv41341 Davidia involucrata HOM05D007659 ORTHO05D009227 5.2e-36 154.5 117 65.8
Haze_19130 Corylus avellana HOM05D007659 ORTHO05D009227 2.2e-34 149.1 88 86.4
GSVIVG01023691001 Vitis vinifera HOM05D007659 ORTHO05D009227 2.2e-34 149.1 118 65.3
CiPaw.15G164100 Carya illinoinensis HOM05D007659 ORTHO05D009227 4.9e-34 147.9 102 71.6
Prupe.1G101900 Prunus persica HOM05D007659 ORTHO05D009227 8.3e-34 147.1 117 61.5
Hma1.2p1_1084F.1_g255330 Hydrangea macrophylla HOM05D007659 ORTHO05D009227 2.0e-32 142.5 115 60.9
Thecc.09G154300 Theobroma cacao HOM05D007659 ORTHO05D009227 7.8e-32 140.6 113 62.8
Duzib187G1272 Durio zibethinus HOM05D007659 ORTHO05D009227 2.3e-31 139.0 118 63.6
Eucgr.C02516 Eucalyptus grandis HOM05D007659 ORTHO05D009227 5.0e-31 137.9 118 59.3
Rhsim01G0023600 Rhododendron simsii HOM05D007659 ORTHO05D009227 5.0e-31 137.9 119 61.3
RcHm_v2.0_Chr4g0405451 Rosa chinensis HOM05D007659 ORTHO05D009227 5.0e-31 137.9 118 61.0
CANSAT11G2634 Cannabis sativa HOM05D007659 ORTHO05D009227 6.6e-31 137.5 119 58.8
Eucgr.L01549 Eucalyptus grandis HOM05D007659 ORTHO05D009227 9.5e-30 133.7 118 57.6
Aqoxy7G03300 Aquilegia oxysepala HOM05D007659 ORTHO05D009227 1.2e-29 133.3 119 57.1
MD12G1196500 Malus domestica HOM05D007659 ORTHO05D009227 2.1e-29 132.5 125 57.6
Cfa020779 Carpinus fangiana HOM05D001390 ORTHO05D001522 2.8e-29 132.1 72 93.1
FvH4_4g09760 Fragaria vesca HOM05D007659 ORTHO05D009227 1.4e-28 129.8 118 59.3
Ciclev10009916m.g Citrus clementina HOM05D007659 ORTHO05D009227 5.2e-28 127.9 124 58.1
FAN07G1615 Fragaria x ananassa HOM05D007659 ORTHO05D009227 1.2e-27 126.7 118 58.5
TWI63G1302 Tripterygium wilfordii HOM05D007659 ORTHO05D009227 1.2e-27 126.7 116 56.9
Sabra06G0137200 Salix brachista HOM05D007659 ORTHO05D009227 5.8e-27 124.4 120 54.2
Manes.06G031900 Manihot esculenta HOM05D007659 ORTHO05D009227 7.5e-27 124.0 119 57.1
EL10Ac4g09658 Beta vulgaris HOM05D007659 ORTHO05D009227 1.3e-26 123.2 115 52.2
Nn8g40114 Nelumbo nucifera HOM05D007659 ORTHO05D009227 3.7e-26 121.7 119 55.5
Actinidia28561 Actinidia chinensis HOM05D007659 ORTHO05D009227 4.9e-26 121.3 106 62.3
Lj4g0008058 Lotus japonicus HOM05D007659 ORTHO05D009227 6.4e-26 120.9 116 54.3
Peaxi162Scf00038g00725 Petunia axillaris HOM05D007659 ORTHO05D009227 1.1e-25 120.2 122 55.7
vmacro13049 Vaccinium macrocarpon HOM05D007659 ORTHO05D009227 1.9e-25 119.4 121 56.2
FAN22G0789 Fragaria x ananassa HOM05D007659 ORTHO05D009227 2.4e-25 119.0 118 56.8
MELO3C010198.2 Cucumis melo HOM05D007659 ORTHO05D009227 3.2e-25 118.6 121 51.2
CsaV3_1G029210 Cucumis sativus L. HOM05D007659 ORTHO05D009227 3.2e-25 118.6 120 54.2
Sed0026034 Sechium edule HOM05D007659 ORTHO05D009227 3.2e-25 118.6 123 52.8
VMungo1215G2964 Vigna mungo HOM05D007659 ORTHO05D009227 9.2e-25 117.1 102 53.9
ClCG06G012660 Citrullus lanatus HOM05D007659 ORTHO05D009227 1.2e-24 116.7 121 51.2
Cc02_g28880 Coffea canephora HOM05D007659 ORTHO05D009227 1.2e-24 116.7 88 67.0
Hund07205 Selenicereus undatus HOM05D007659 ORTHO05D009227 1.2e-24 116.7 115 51.3
MSTRG.6163 Avicennia marina HOM05D007659 ORTHO05D009227 4.6e-24 114.8 118 52.5
Cc00_g30920 Coffea canephora HOM05D007659 ORTHO05D009227 6.0e-24 114.4 88 65.9
Phvul.003G153300 Phaseolus vulgaris HOM05D007659 ORTHO05D009227 7.8e-24 114.0 85 60.0
Gorai.009G368800 Gossypium raimondii HOM05D007659 ORTHO05D009227 5.0e-23 111.3 109 56.0
PGSC0003DMG400011214 Solanum tuberosum HOM05D007659 ORTHO05D009227 5.0e-23 111.3 124 47.6
PGR102G1560 Punica granatum HOM05D007659 ORTHO05D009227 1.1e-22 110.2 88 60.2
Gohir.D05G342500 Gossypium hirsutum HOM05D007659 ORTHO05D009227 1.5e-22 109.8 96 58.3
Ah.06g188510 Amaranthus hybridus HOM05D000987 ORTHO05D000831 1.9e-22 109.4 101 56.4
A03p60380 Brassica napus HOM05D007659 ORTHO05D009227 1.9e-22 109.4 93 60.2
BraA03t15078Z Brassica rapa HOM05D007659 ORTHO05D009227 1.9e-22 109.4 93 60.2
Solyc07g006040.3 Solanum lycopersicum HOM05D007659 ORTHO05D009227 2.5e-22 109.0 123 47.2
Medtr4g130250 Medicago truncatula HOM05D007659 ORTHO05D009227 4.3e-22 108.2 91 56.0
AL7G21270 Arabidopsis lyrata HOM05D007659 ORTHO05D009227 7.3e-22 107.5 84 64.3
BcaNung01556 Brassica carinata HOM05D007659 ORTHO05D009227 7.3e-22 107.5 102 56.9
Glyma.17G071000 Glycine max HOM05D007659 ORTHO05D009227 7.3e-22 107.5 99 54.5
Carub.0007s0971 Capsella rubella HOM05D007659 ORTHO05D009227 9.5e-22 107.1 82 63.4
AT4G30845 Arabidopsis thaliana HOM05D007659 ORTHO05D009227 2.8e-21 105.5 84 61.9
Gohir.A04G040700 Gossypium hirsutum HOM05D007659 ORTHO05D009227 2.8e-21 105.5 96 56.2
Lalb_Chr12g0198851 Lupinus albus HOM05D007659 ORTHO05D009227 2.8e-21 105.5 119 49.6
SalBow6G0978 Salvia bowleyana HOM05D007659 ORTHO05D009227 3.6e-21 105.1 108 59.3
BcaNung02735 Brassica carinata HOM05D007659 ORTHO05D009227 4.7e-21 104.8 96 59.4
Aa31LG2G19540 Aethionema arabicum HOM05D007659 ORTHO05D009227 6.2e-21 104.4 97 54.6
C07p58250 Brassica napus HOM05D007659 ORTHO05D009227 1.1e-20 103.6 93 58.1
BolC7t46283H Brassica oleracea HOM05D007659 ORTHO05D009227 1.1e-20 103.6 93 58.1
arahy.Tifrunner.gnm1.ann1.FWLQ6H Arachis hypogaea HOM05D007659 ORTHO05D009227 1.4e-20 103.2 90 55.6
arahy.Tifrunner.gnm1.ann1.KUG4GU Arachis hypogaea HOM05D007659 ORTHO05D009227 1.4e-20 103.2 90 55.6
Sc06g0005340 Simmondsia chinensis HOM05D007659 ORTHO05D009227 2.3e-20 102.4 108 50.0
Lsat_1_v5_gn_7_50920 Lactuca sativa HOM05D007659 ORTHO05D009227 3.1e-20 102.1 88 62.5
Potri.006G180200 Populus trichocarpa HOM05D007659 ORTHO05D009227 4.0e-20 101.7 162 38.3
Thhalv10026581m.g Eutrema salsugineum HOM05D007659 ORTHO05D009227 5.2e-20 101.3 92 57.6
HanXRQChr03g0066011 Helianthus annuus HOM05D007659 ORTHO05D009227 6.8e-20 100.9 117 53.0
Psat4g010200 Pisum sativum HOM05D007659 ORTHO05D009227 6.8e-20 100.9 114 46.5
CARHR238720 Cardamine hirsuta HOM05D007659 ORTHO05D009227 8.9e-20 100.5 112 53.6
Ca_21156_v3 Cicer arietinum L. HOM05D007659 ORTHO05D009227 2.0e-19 99.4 117 47.0
Migut.J01394 Erythranthe guttata HOM05D007659 ORTHO05D009227 2.0e-19 99.4 82 63.4
CDE04G0159 Ceratophyllum demersum HOM05D007659 ORTHO05D009227 2.6e-19 99.0 102 46.1
THA.LOC104803555 Tarenaya hassleriana HOM05D007659 ORTHO05D009227 3.4e-19 98.6 113 46.9
unitig_736.g22510 Utricularia gibba HOM05D007659 ORTHO05D009227 2.4e-17 92.4 75 60.0
PSO782G2453 Papaver somniferum HOM05D007659 ORTHO05D009227 9.2e-17 90.5 99 50.5
PSO063G0802 Papaver somniferum HOM05D007659 ORTHO05D009227 1.6e-16 89.7 99 50.5
TPR.G24875 Trifolium pratense HOM05D007659 ORTHO05D009227 1.0e-15 87.0 71 54.9
Nitab4.5_0016001g0010 Nicotiana tabacum HOM05D007659 ORTHO05D009227 3.0e-15 85.5 57 68.4
HPP92_006698 Vanilla planifolia HOM05D007659 ORTHO05D009227 3.9e-15 85.1 117 40.2
ATR0111G019 Amborella trichopoda HOM05D007659 ORTHO05D009227 8.6e-15 84.0 61 63.9
MD04G1182900 Malus domestica HOM05D007659 ORTHO05D009227 2.5e-14 82.4 51 76.5
Os03g0210900 Oryza sativa ssp. japonica HOM05D007659 ORTHO05D009227 5.6e-14 81.3 57 66.7
Zm00001eb400430 Zea mays HOM05D007659 ORTHO05D009227 3.1e-12 75.5 77 50.6
CSS0019882 Camellia sinensis var. sinensis HOM05D013364 ORTHO05D009227 2.2e-10 69.3 75 53.3
CSS0036875 Camellia sinensis var. sinensis HOM05D013364 ORTHO05D009227 6.4e-10 67.8 75 52.0
CSS0048580 Camellia sinensis var. sinensis HOM05D013364 ORTHO05D009227 6.4e-10 67.8 75 50.7
CSS0021661 Camellia sinensis var. sinensis HOM05D013364 ORTHO05D009227 8.3e-10 67.4 75 49.3
CSS0049883 Camellia sinensis var. sinensis HOM05D013364 ORTHO05D009227 1.1e-09 67.0 75 52.0
CSS0009256 Camellia sinensis var. sinensis HOM05D013364 ORTHO05D009227 1.4e-09 66.6 75 50.7
Mapoly0004s0134 Marchantia polymorpha HOM05D007659 ORTHO05D009227 3.2e-09 65.5 89 39.3
CSS0041034 Camellia sinensis var. sinensis HOM05D013364 ORTHO05D009227 4.6e-08 61.6 88 39.8
CSS0028860 Camellia sinensis var. sinensis HOM05D013364 ORTHO05D009227 6.0e-08 61.2 75 48.0
CBR_g10976 Chara braunii HOM05D007659 ORTHO05D009227 7.8e-08 60.8 52 51.9
CSS0031893 Camellia sinensis var. sinensis HOM05D013364 ORTHO05D009227 3.0e-07 58.9 75 48.0
Pp3c17_8590 Physcomitrium patens HOM05D007659 ORTHO05D009227 6.6e-07 57.8 53 45.3
AagrBONN_evm.TU.Sc2ySwM_228.2308 Anthoceros agrestis HOM05D007659 ORTHO05D009227 2.5e-06 55.8 60 43.3
CSS0018183 Camellia sinensis var. sinensis HOM05D013364 ORTHO05D009227 4.3e-06 55.1 70 45.7
CSS0037647 Camellia sinensis var. sinensis HOM05D013364 ORTHO05D009227 7.3e-06 54.3 63 46.0


User provided reference genes

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