Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_19098 Corylus avellana HOM05D005675 ORTHO05D006884 2.2e-205 718.8 369 100.0
Cfa020754 Carpinus fangiana HOM05D005675 ORTHO05D006884 1.6e-144 516.5 392 73.7
CiPaw.16G104100 Carya illinoinensis HOM05D005675 ORTHO05D006884 1.1e-108 397.5 391 58.8
QL11p008661 Quercus lobata HOM05D005675 ORTHO05D006884 1.0e-106 391.0 389 59.1
Prupe.4G276600 Prunus persica HOM05D005675 ORTHO05D006884 1.5e-81 307.4 391 49.6
Dinv26452 Davidia involucrata HOM05D005675 ORTHO05D006884 2.2e-80 303.5 391 48.8
Potri.006G078700 Populus trichocarpa HOM05D005675 ORTHO05D006884 1.8e-79 300.4 387 46.8
Dinv25398 Davidia involucrata HOM05D005675 ORTHO05D006884 5.9e-78 295.4 392 48.7
Manes.01G177400 Manihot esculenta HOM05D005675 ORTHO05D006884 1.3e-77 294.3 391 47.1
Actinidia02470 Actinidia chinensis HOM05D005675 ORTHO05D006884 8.6e-77 291.6 388 48.5
Sabra06G0059600 Salix brachista HOM05D005675 ORTHO05D006884 2.5e-76 290.0 392 45.2
GSVIVG01000235001 Vitis vinifera HOM05D005675 ORTHO05D006884 2.5e-76 290.0 385 46.8
TAR626G0076 Trochodendron aralioides HOM05D005675 ORTHO05D006884 2.1e-75 287.0 395 46.8
RcHm_v2.0_Chr2g0128761 Rosa chinensis HOM05D005675 ORTHO05D006884 3.6e-75 286.2 388 49.0
Hma1.2p1_0661F.1_g198030 Hydrangea macrophylla HOM05D005675 ORTHO05D006884 1.8e-74 283.9 395 46.8
Lj1g0011117 Lotus japonicus HOM05D005675 ORTHO05D006884 3.1e-74 283.1 390 46.7
Ciclev10008766m.g Citrus clementina HOM05D005675 ORTHO05D006884 4.0e-74 282.7 388 45.1
CSS0039496 Camellia sinensis var. sinensis HOM05D005675 ORTHO05D006884 8.9e-74 281.6 388 46.6
MD07G1305000 Malus domestica HOM05D005675 ORTHO05D006884 3.4e-73 279.6 396 48.5
TWI63G1173 Tripterygium wilfordii HOM05D005675 ORTHO05D006884 1.7e-72 277.3 392 45.2
TWI34G2031 Tripterygium wilfordii HOM05D005675 ORTHO05D006884 1.4e-71 274.2 389 46.0
FAN09G4269 Fragaria x ananassa HOM05D005675 ORTHO05D006884 2.4e-71 273.5 387 46.5
FAN14G0585 Fragaria x ananassa HOM05D005675 ORTHO05D006884 1.0e-69 268.1 387 45.0
vmacro20762 Vaccinium macrocarpon HOM05D005675 ORTHO05D006884 1.3e-69 267.7 432 41.0
Eucgr.C02170 Eucalyptus grandis HOM05D005675 ORTHO05D006884 1.1e-68 264.6 382 42.7
FAN05G3686 Fragaria x ananassa HOM05D005675 ORTHO05D006884 4.7e-67 259.2 393 45.5
COL.COLO4_23415 Corchorus olitorius HOM05D005675 ORTHO05D006884 1.1e-66 258.1 379 42.5
Ca_25634_v3 Cicer arietinum L. HOM05D005675 ORTHO05D001317 2.3e-66 256.9 384 44.5
Gohir.A08G016800 Gossypium hirsutum HOM05D005675 ORTHO05D006884 1.3e-64 251.1 383 44.9
Gorai.004G024100 Gossypium raimondii HOM05D005675 ORTHO05D006884 2.9e-64 250.0 381 44.6
PGR044G2364 Punica granatum HOM05D005675 ORTHO05D006884 8.3e-64 248.4 376 44.4
CANSAT80G1422 Cannabis sativa HOM05D005675 ORTHO05D006884 1.4e-63 247.7 389 40.9
Gohir.D08G027200 Gossypium hirsutum HOM05D005675 ORTHO05D006884 1.4e-63 247.7 381 44.4
PSO063G5127 Papaver somniferum HOM05D005675 ORTHO05D006884 4.1e-63 246.1 394 44.9
Cpa.g.sc115.21 Carica papaya HOM05D005675 ORTHO05D006884 1.2e-62 244.6 389 43.2
Duzib168G1643 Durio zibethinus HOM05D005675 ORTHO05D006884 1.2e-62 244.6 384 41.9
TPR.G21343 Trifolium pratense HOM05D005675 ORTHO05D006884 2.7e-62 243.4 402 41.5
Glyma.01G001700 Glycine max HOM05D005675 ORTHO05D006884 4.6e-62 242.7 401 43.1
Phvul.004G178000 Phaseolus vulgaris HOM05D005675 ORTHO05D006884 1.3e-61 241.1 384 42.2
Medtr6g093070 Medicago truncatula HOM05D005675 ORTHO05D006884 2.3e-61 240.4 389 41.1
PSO170G1351 Papaver somniferum HOM05D005675 ORTHO05D006884 3.9e-61 239.6 394 43.9
Rhsim01G0109900 Rhododendron simsii HOM05D005675 ORTHO05D006884 8.6e-61 238.4 320 45.9
Lalb_Chr14g0362531 Lupinus albus HOM05D005675 ORTHO05D006884 1.9e-60 237.3 384 42.7
arahy.Tifrunner.gnm1.ann1.RL68NL Arachis hypogaea HOM05D005675 ORTHO05D006884 3.3e-60 236.5 402 41.3
Cc00_g00090 Coffea canephora HOM05D005675 ORTHO05D006884 7.3e-60 235.3 382 40.8
VMungo0464G1932 Vigna mungo HOM05D005675 ORTHO05D001317 1.1e-58 231.5 380 43.2
ClCG05G011260 Citrullus lanatus HOM05D005675 ORTHO05D006884 1.4e-58 231.1 402 41.8
Sed0020807 Sechium edule HOM05D005675 ORTHO05D006884 5.8e-57 225.7 397 41.1
DCAR_009047 Daucus carota HOM05D005675 ORTHO05D006884 7.6e-57 225.3 390 41.5
Nitab4.5_0014696g0010 Nicotiana tabacum HOM05D005675 ORTHO05D006884 1.3e-56 224.6 389 38.6
Solyc12g017470.2 Solanum lycopersicum HOM05D005675 ORTHO05D006884 8.3e-56 221.9 383 39.2
CAN.G1751.7 Capsicum annuum HOM05D005675 ORTHO05D006884 1.9e-55 220.7 391 39.6
Sopen07g006010 Solanum pennellii HOM05D005675 ORTHO05D006884 1.9e-55 220.7 377 40.3
Solyc07g017290.4 Solanum lycopersicum HOM05D005675 ORTHO05D006884 4.1e-55 219.5 375 40.3
Thecc.09G196800 Theobroma cacao HOM05D005675 ORTHO05D006884 1.6e-54 217.6 364 42.0
MSTRG.26518 Avicennia marina HOM05D005675 ORTHO05D006884 4.6e-54 216.1 395 39.2
CSS0020115 Camellia sinensis var. sinensis HOM05D005675 ORTHO05D006884 7.8e-54 215.3 235 54.0
FvH4_6g26940 Fragaria vesca HOM05D005675 ORTHO05D006884 1.7e-53 214.2 241 51.9
CsaV3_3G021160 Cucumis sativus L. HOM05D005675 ORTHO05D006884 3.9e-53 213.0 385 39.5
Prupe.3G126100 Prunus persica HOM05D005675 ORTHO05D006884 6.6e-53 212.2 390 40.0
Aa31LG3G3440 Aethionema arabicum HOM05D005675 ORTHO05D006884 2.5e-52 210.3 378 39.2
ECA240G2624 Erigeron canadensis HOM05D005675 ORTHO05D006884 5.2e-50 202.6 381 40.4
THA.LOC104815311 Tarenaya hassleriana HOM05D005675 ORTHO05D006884 8.9e-50 201.8 377 38.5
Lsat_1_v5_gn_7_57460 Lactuca sativa HOM05D005675 ORTHO05D006884 4.4e-49 199.5 365 38.4
MBI13_g31573_MAGBIO Magnolia biondii HOM05D005675 ORTHO05D006884 8.4e-48 195.3 423 36.2
Migut.L01917 Erythranthe guttata HOM05D005675 ORTHO05D006884 1.1e-47 194.9 392 35.7
BraA03t12828Z Brassica rapa HOM05D005675 ORTHO05D006884 1.2e-46 191.4 380 38.7
BolC3t16698H Brassica oleracea HOM05D005675 ORTHO05D006884 1.6e-46 191.0 373 38.3
MELO3C020255.2 Cucumis melo HOM05D005675 ORTHO05D006884 1.6e-46 191.0 364 38.5
SalBow5G0607 Salvia bowleyana HOM05D005675 ORTHO05D006884 1.6e-46 191.0 406 37.2
BcaC01g04171 Brassica carinata HOM05D005675 ORTHO05D006884 7.8e-46 188.7 380 37.6
BolC5t34404H Brassica oleracea HOM05D005675 ORTHO05D006884 1.7e-45 187.6 378 39.4
SGA_v2.0_scaffold21G09606 Striga asiatica HOM05D005675 ORTHO05D006884 2.3e-45 187.2 398 36.9
C05p57470 Brassica napus HOM05D005675 ORTHO05D006884 3.0e-45 186.8 378 39.2
Atru.chr2.1389 Acer truncatum HOM05D005675 ORTHO05D006884 5.1e-45 186.0 381 37.0
A03p36640 Brassica napus HOM05D005675 ORTHO05D006884 5.1e-45 186.0 380 36.3
Sopen12g008260 Solanum pennellii HOM05D005675 ORTHO05D006884 5.1e-45 186.0 245 44.5
BcaC05g29447 Brassica carinata HOM05D005675 ORTHO05D006884 1.5e-44 184.5 378 38.1
AT3G10572 Arabidopsis thaliana HOM05D005675 ORTHO05D006884 1.6e-43 181.0 381 37.3
BraA05t22649Z Brassica rapa HOM05D005675 ORTHO05D006884 1.6e-43 181.0 378 37.6
AL3G45830 Arabidopsis lyrata HOM05D005675 ORTHO05D006884 2.1e-43 180.6 375 37.6
Thhalv10021093m.g Eutrema salsugineum HOM05D005675 ORTHO05D006884 2.1e-43 180.6 373 37.0
Oeu036952.2 Olea europaea HOM05D005675 ORTHO05D006884 2.1e-43 180.6 494 31.4
SGA_v2.0_scaffold339G49254 Striga asiatica HOM05D005675 ORTHO05D006884 6.2e-43 179.1 395 36.2
Carub.0003s0981 Capsella rubella HOM05D005675 ORTHO05D006884 5.3e-42 176.0 376 36.7
PGSC0003DMG400006457 Solanum tuberosum HOM05D005675 ORTHO05D006884 1.2e-41 174.9 307 38.4
CAN.G1751.9 Capsicum annuum HOM05D005675 ORTHO05D006884 1.5e-41 174.5 316 37.3
AL3G22010 Arabidopsis lyrata HOM05D005675 ORTHO05D006884 2.6e-41 173.7 381 35.7
SHI13641 Sapria himalayana HOM05D005675 ORTHO05D006884 9.9e-41 171.8 392 37.8
A05p38580 Brassica napus HOM05D005675 ORTHO05D006884 1.3e-40 171.4 378 36.2
CAN.G309.91 Capsicum annuum HOM05D005675 ORTHO05D006884 1.7e-40 171.0 253 41.1
HanXRQChr03g0067281 Helianthus annuus HOM05D005675 ORTHO05D006884 2.9e-40 170.2 379 34.3
AUR62002223 Chenopodium quinoa HOM05D005675 ORTHO05D006884 8.4e-40 168.7 378 36.8
FAN02G0472 Fragaria x ananassa HOM05D005675 ORTHO05D006884 1.1e-39 168.3 283 41.0
Sp3g08870 Schrenkiella parvula HOM05D005675 ORTHO05D006884 1.2e-38 164.9 372 36.0
AUR62015436 Chenopodium quinoa HOM05D005675 ORTHO05D006884 4.3e-36 156.4 369 35.5
C03p44280 Brassica napus HOM05D005675 ORTHO05D006884 5.6e-36 156.0 365 34.8
Ah.06g185690 Amaranthus hybridus HOM05D005675 ORTHO05D006884 1.3e-35 154.8 381 34.4
PSO170G0789 Papaver somniferum HOM05D005675 ORTHO05D006884 4.8e-35 152.9 239 44.4
PSO170G4889 Papaver somniferum HOM05D005675 ORTHO05D006884 4.8e-35 152.9 239 44.4
PSO170G5374 Papaver somniferum HOM05D005675 ORTHO05D006884 4.8e-35 152.9 239 44.4
Aqoxy6G03025 Aquilegia oxysepala HOM05D005675 ORTHO05D006884 1.4e-34 151.4 313 33.5
ATR0626G294 Amborella trichopoda HOM05D005675 ORTHO05D006884 5.8e-33 146.0 394 31.7
CAN.G486.3 Capsicum annuum HOM05D002496 ORTHO05D002787 1.3e-32 144.8 276 36.6
Glyma.07G130600 Glycine max HOM05D005675 ORTHO05D006884 2.9e-32 143.7 275 40.0
Sc26g0001420 Simmondsia chinensis HOM05D005675 ORTHO05D006884 2.9e-32 143.7 339 34.8
CDE05G2328 Ceratophyllum demersum HOM05D005675 ORTHO05D006884 1.9e-31 141.0 399 29.8
PSO431G0001 Papaver somniferum HOM05D005675 ORTHO05D006884 5.4e-31 139.4 179 49.2
PSO170G3345 Papaver somniferum HOM05D005675 ORTHO05D006884 7.1e-31 139.0 228 43.0
HPP92_010804 Vanilla planifolia HOM05D005675 ORTHO05D006884 1.6e-30 137.9 385 29.9
PGSC0003DMG400009563 Solanum tuberosum HOM05D005675 ORTHO05D006884 1.0e-29 135.2 171 42.1
Hund11839 Selenicereus undatus HOM05D005675 ORTHO05D006884 9.6e-28 128.6 393 32.3
Nn8g41130 Nelumbo nucifera HOM05D005675 ORTHO05D006884 1.6e-27 127.9 198 44.4
EL10Ac3g05860 Beta vulgaris HOM05D005675 ORTHO05D006884 2.8e-27 127.1 311 35.0
Os06g0702800 Oryza sativa ssp. japonica HOM05D005675 ORTHO05D006884 1.2e-25 121.7 400 27.8
TAR383G0085 Trochodendron aralioides HOM05D005675 ORTHO05D006884 2.0e-25 120.9 258 36.0
Nitab4.5_0000899g0040 Nicotiana tabacum HOM05D005675 ORTHO05D006884 3.4e-25 120.2 209 39.7
Peaxi162Scf01527g00006 Petunia axillaris HOM05D005675 ORTHO05D006884 7.6e-25 119.0 177 40.7
Haze_19095 Corylus avellana HOM05D005675 ORTHO05D006884 1.3e-24 118.2 64 92.2
CARHR085110 Cardamine hirsuta HOM05D005675 ORTHO05D006884 2.5e-23 114.0 228 34.6
Zm00001eb227160 Zea mays HOM05D005675 ORTHO05D006884 2.5e-23 114.0 349 30.4
CAN.G2070.2 Capsicum annuum HOM05D005675 ORTHO05D006884 1.3e-21 108.2 150 44.0
Lju432C7G1 Lonicera japonica HOM05D005675 ORTHO05D006884 3.9e-21 106.7 395 28.4
SEGI_03452 Sequoiadendron giganteum HOM05D005675 ORTHO05D006884 1.1e-18 98.6 245 31.4
unitig_578.g16399 Utricularia gibba HOM05D005675 ORTHO05D006884 1.2e-17 95.1 209 35.4
unitig_578.g16398 Utricularia gibba HOM05D005675 ORTHO05D006884 1.4e-15 88.2 129 38.0
CSS0044900 Camellia sinensis var. sinensis HOM05D005675 ORTHO05D006884 6.1e-14 82.8 79 55.7
CAN.G1703.6 Capsicum annuum HOM05D002496 ORTHO05D002787 2.3e-13 80.9 94 44.7
CARHR085100 Cardamine hirsuta HOM05D005675 ORTHO05D006884 6.7e-13 79.3 70 64.3
Pp3c9_5270 Physcomitrium patens HOM05D005675 ORTHO05D006884 2.5e-12 77.4 390 25.9
Gohir.D08G027550 Gossypium hirsutum HOM05D005675 ORTHO05D006884 8.2e-11 72.4 92 45.7
AagrBONN_evm.TU.Sc2ySwM_344.4450 Anthoceros agrestis HOM05D034800 ORTHO05D006884 3.4e-09 67.0 374 23.3
Gorai.004G024600 Gossypium raimondii HOM05D005675 ORTHO05D006884 4.5e-09 66.6 92 43.5
Sopen12g008240 Solanum pennellii HOM05D005675 ORTHO05D006884 4.5e-09 66.6 67 55.2
Sopen00g008260 Solanum pennellii HOM05D005675 ORTHO05D006884 8.5e-08 62.4 53 60.4
SMO367G0141 Selaginella moellendorffii HOM05D005675 ORTHO05D006884 1.1e-07 62.0 194 27.8


User provided reference genes

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